Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_07005

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
1,546,712	+		AO356_06995	0.74	-2.4
1,546,713	-		AO356_06995	0.74	-0.9
1,546,714	+		AO356_06995	0.75	-0.8
1,546,714	+				+1.3
1,546,714	+		AO356_06995	0.75	-1.4
1,546,714	+		AO356_06995	0.75	-1.9
1,546,715	-		AO356_06995	0.75	-1.3
1,546,715	-		AO356_06995	0.75	-1.4
1,546,715	-		AO356_06995	0.75	-1.3
1,546,715	-		AO356_06995	0.75	-0.1
1,546,715	-		AO356_06995	0.75	-2.3
1,546,715	-		AO356_06995	0.75	-1.6
1,546,715	-		AO356_06995	0.75	-3.0
1,546,719	-		AO356_06995	0.76	+1.3
1,546,719	-		AO356_06995	0.76	-1.3
1,546,864	+				-1.3
1,546,896	+				-1.3
1,547,193	+		AO356_07000	0.45	-2.7
1,547,193	+		AO356_07000	0.45	-0.1
1,547,193	+		AO356_07000	0.45	-1.5
1,547,193	+		AO356_07000	0.45	+0.1
1,547,193	+		AO356_07000	0.45	-2.3
1,547,376	+		AO356_07000	0.68	+0.9
1,547,376	+		AO356_07000	0.68	-1.6
1,547,652	+				-1.9
1,547,792	+		AO356_07005	0.20	-1.9
1,547,792	+		AO356_07005	0.20	-0.9
1,547,798	+		AO356_07005	0.21	-1.7
1,547,936	+		AO356_07005	0.38	-1.5
1,548,419	+				+0.3
1,548,419	+				-1.5
1,548,440	+				+0.7
1,548,440	+				-1.7
1,548,441	-				-2.1
1,548,441	-				-0.9
1,548,441	-				-0.3
1,548,528	+				-0.9
1,548,528	+				-0.5
1,548,528	+				-1.8
1,548,528	+				-2.4
1,548,528	+				-2.6
1,548,528	+				-2.3
1,548,529	-				-1.0
1,548,529	-				-0.9
1,548,529	-				-1.1
1,548,529	-				-0.5
1,548,529	-				-2.1
1,548,529	-				-2.1
1,548,529	-				-1.0
1,548,529	-				+0.9
1,548,531	-				-2.3
1,548,531	-				-0.9
1,548,531	-				-1.1
1,548,590	+				-2.1
1,548,590	+				-1.4
1,548,590	+				-1.6
1,548,604	+				-0.1
1,548,646	+				-0.5
1,548,646	+				-1.1
1,548,672	+				-0.9
1,548,672	+				-2.2
1,548,674	+				-0.5
1,548,697	+				-1.8
1,548,699	+				-0.8
1,548,699	+				+0.3
1,548,699	+				-3.0
1,548,699	+				-2.4