Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_06160

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
1,365,295	+				+1.2
1,365,296	-				-0.1
1,365,323	+		AO356_06155	0.13	-0.8
1,365,488	-		AO356_06155	0.36	+0.8
1,365,488	-		AO356_06155	0.36	+0.1
1,365,488	-		AO356_06155	0.36	+0.8
1,365,488	-		AO356_06155	0.36	+0.3
1,365,488	-		AO356_06155	0.36	+0.7
1,365,488	-		AO356_06155	0.36	-1.0
1,365,488	-		AO356_06155	0.36	+0.1
1,365,686	+		AO356_06155	0.65	-0.5
1,365,687	-		AO356_06155	0.65	-1.4
1,365,687	-		AO356_06155	0.65	+0.1
1,365,903	+				-0.8
1,365,904	-				+1.1
1,365,904	-				+0.0
1,365,904	-				+0.7
1,365,961	+				-0.3
1,365,961	+				+0.8
1,365,961	+				-0.1
1,365,961	+				-0.3
1,365,962	-				-0.2
1,365,962	-				+0.1
1,365,962	-				+0.1
1,365,962	-				+0.3
1,365,962	-				-1.0
1,365,962	-				+1.2
1,365,962	-				-1.0
1,366,056	-		AO356_06160	0.13	+0.3
1,366,056	-		AO356_06160	0.13	-1.0
1,366,150	+		AO356_06160	0.24	+1.1
1,366,150	+		AO356_06160	0.24	+0.6
1,366,150	+		AO356_06160	0.24	+1.3
1,366,151	-		AO356_06160	0.25	-0.8
1,366,151	-		AO356_06160	0.25	-0.8
1,366,151	-		AO356_06160	0.25	-1.4
1,366,151	-		AO356_06160	0.25	-0.4
1,366,151	-		AO356_06160	0.25	+0.8
1,366,151	-		AO356_06160	0.25	-0.5
1,366,151	-		AO356_06160	0.25	-0.8
1,366,224	-		AO356_06160	0.33	-0.1
1,366,224	-		AO356_06160	0.33	-0.1
1,366,224	-		AO356_06160	0.33	+0.3
1,366,397	+		AO356_06160	0.55	+0.7
1,366,397	+		AO356_06160	0.55	-1.3
1,366,398	-		AO356_06160	0.55	-1.3
1,366,398	-		AO356_06160	0.55	-0.4
1,366,561	+		AO356_06160	0.74	-0.1
1,366,562	-		AO356_06160	0.75	-0.3
1,366,562	-		AO356_06160	0.75	-0.5
1,366,772	+				+0.4
1,366,772	+				-0.4
1,366,772	+				+0.0
1,366,773	-				+0.8
1,366,773	-				+0.5
1,366,773	-				+0.8
1,366,841	+				+1.4
1,366,841	+				+0.1
1,366,841	+				-0.7
1,366,841	+				-0.1
1,366,841	+				-0.6
1,366,842	-				+1.2
1,366,842	-				+0.0
1,366,842	-				-1.7
1,366,842	-				+0.7
1,366,842	-				-0.6
1,366,842	-				-0.3
1,366,842	-				+0.4
1,366,844	-				+0.3
1,366,949	+		AO356_06165	0.17	-0.0
1,366,949	+		AO356_06165	0.17	+0.6
1,366,949	+		AO356_06165	0.17	+0.2
1,366,949	+		AO356_06165	0.17	+0.1
1,366,950	-		AO356_06165	0.17	+0.4
1,366,950	-		AO356_06165	0.17	-0.7
1,366,950	-		AO356_06165	0.17	+0.8
1,366,950	-		AO356_06165	0.17	-0.8
1,366,950	-		AO356_06165	0.17	-0.3
1,366,950	-		AO356_06165	0.17	-0.4
1,366,950	-		AO356_06165	0.17	-0.5
1,366,950	-		AO356_06165	0.17	-0.8
1,367,519	+		AO356_06165	0.83	+0.7
1,367,519	+		AO356_06165	0.83	-0.3
1,367,519	+		AO356_06165	0.83	+0.8
1,367,519	+		AO356_06165	0.83	+0.5
1,367,519	+		AO356_06165	0.83	+0.5
1,367,519	+		AO356_06165	0.83	-0.4
1,367,519	+		AO356_06165	0.83	+0.1
1,367,520	-		AO356_06165	0.83	-0.1
1,367,520	-		AO356_06165	0.83	+1.0
1,367,520	-		AO356_06165	0.83	-0.2
1,367,520	-		AO356_06165	0.83	-0.3
1,367,520	-		AO356_06165	0.83	-0.0
1,367,520	-		AO356_06165	0.83	-0.4
1,367,529	+		AO356_06165	0.84	-0.9
1,367,530	-		AO356_06165	0.84	-0.8
1,367,530	-		AO356_06165	0.84	+0.4
1,367,530	-		AO356_06165	0.84	+0.6
1,367,561	+		AO356_06165	0.88	-0.5
1,367,562	-		AO356_06165	0.88	-0.1
1,367,562	-		AO356_06165	0.88	+0.5
1,367,562	-		AO356_06165	0.88	-0.2
1,367,606	+				-0.4
1,367,606	+				-1.4
1,367,648	+				-1.1
1,367,648	+				+0.7
1,367,649	-				+0.1
1,367,649	-				+1.1
1,367,649	-				-0.3
1,367,651	+				-0.4
1,367,651	+				+1.1
1,367,651	+				-0.4
1,367,651	+				-0.9
1,367,652	-				-0.7
1,367,672	-				+0.6
1,367,697	-		AO356_06170	0.11	-0.6
1,367,697	-		AO356_06170	0.11	-0.2
1,367,728	+		AO356_06170	0.21	+0.2
1,367,728	+		AO356_06170	0.21	+0.8
1,367,729	-		AO356_06170	0.21	+2.0