Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_05370

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
1,206,179	+				+0.5
1,206,236	+		AO356_05365	0.12	+0.3
1,206,236	+		AO356_05365	0.12	+0.3
1,206,236	+		AO356_05365	0.12	+1.4
1,206,236	+		AO356_05365	0.12	-0.2
1,206,236	+		AO356_05365	0.12	-1.4
1,206,237	-		AO356_05365	0.12	+0.3
1,206,237	-		AO356_05365	0.12	+0.9
1,206,237	-		AO356_05365	0.12	-0.2
1,206,314	+		AO356_05365	0.21	+0.4
1,206,314	+		AO356_05365	0.21	+0.4
1,206,315	-		AO356_05365	0.21	-0.8
1,206,315	-		AO356_05365	0.21	+0.4
1,206,431	+		AO356_05365	0.34	-0.2
1,206,431	+		AO356_05365	0.34	-0.0
1,206,431	+		AO356_05365	0.34	+0.4
1,206,432	-		AO356_05365	0.34	+0.1
1,206,456	-		AO356_05365	0.36	+0.8
1,206,515	+		AO356_05365	0.43	+0.3
1,206,516	-		AO356_05365	0.43	-1.4
1,206,516	-		AO356_05365	0.43	+1.1
1,206,528	-		AO356_05365	0.44	-0.3
1,206,686	+		AO356_05365	0.61	+0.1
1,206,687	-		AO356_05365	0.62	+0.2
1,206,687	-		AO356_05365	0.62	-0.7
1,206,753	+		AO356_05365	0.69	+1.9
1,206,981	+				+1.4
1,207,073	-				+0.1
1,207,075	+				+0.4
1,207,075	+				-0.9
1,207,106	-				+0.3
1,207,193	+				-0.3
1,207,194	-				+1.5
1,207,260	-		AO356_05370	0.20	-0.9
1,207,632	+		AO356_05370	0.81	+0.5
1,207,632	+		AO356_05370	0.81	+0.7
1,207,632	+		AO356_05370	0.81	+0.3
1,207,633	-		AO356_05370	0.82	-0.4
1,207,641	+		AO356_05370	0.83	+1.1
1,207,642	-		AO356_05370	0.83	+0.3
1,207,642	-		AO356_05370	0.83	+0.6
1,207,711	+				+0.8
1,207,712	-				+0.5
1,207,712	-				-0.3
1,207,772	+				-1.1
1,207,772	+				-0.1
1,207,773	-				-1.7
1,207,773	-				-0.7
1,207,978	+		AO356_05375	0.26	+0.6
1,207,979	-		AO356_05375	0.26	+0.1
1,207,979	-		AO356_05375	0.26	+0.4
1,207,979	-		AO356_05375	0.26	+0.1
1,207,979	-		AO356_05375	0.26	+0.8
1,208,063	+		AO356_05375	0.38	+0.2
1,208,063	+		AO356_05375	0.38	+0.1
1,208,063	+		AO356_05375	0.38	-0.6
1,208,064	-		AO356_05375	0.39	+1.0
1,208,064	-		AO356_05375	0.39	-0.1
1,208,064	-		AO356_05375	0.39	+0.2
1,208,064	-		AO356_05375	0.39	-0.2
1,208,281	+		AO356_05375	0.71	+0.7
1,208,452	+				+0.6
1,208,495	+				-0.4
1,208,495	+				+1.4
1,208,496	-				+0.4
1,208,497	+				-0.2
1,208,498	-				-0.4
1,208,556	+				+0.0
1,208,556	+				+1.3
1,208,678	+				-0.8
1,208,678	+				+0.7
1,208,678	+				-0.8
1,208,678	+				+0.3
1,208,717	+		AO356_05380	0.10	+0.2
1,208,717	+		AO356_05380	0.10	-0.9
1,208,718	-		AO356_05380	0.10	-0.2
1,208,718	-		AO356_05380	0.10	-0.1
1,208,718	-		AO356_05380	0.10	+0.1
1,208,718	-		AO356_05380	0.10	+2.5