Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_04840

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
1,087,738	+				+0.4
1,087,739	-				-0.4
1,087,739	-				-0.9
1,087,760	-				-0.2
1,087,767	+				-0.2
1,087,830	+				-0.2
1,087,830	+				+0.7
1,087,830	+				+0.5
1,087,830	+				-0.3
1,087,831	-				+1.0
1,087,831	-				+0.2
1,087,831	-				-1.8
1,087,831	-				-0.2
1,087,831	-				-0.8
1,087,832	+				-0.7
1,087,832	+				-0.4
1,087,832	+				+0.1
1,087,832	+				+0.3
1,087,832	+				-0.0
1,087,832	+				+0.4
1,087,832	+				+0.1
1,087,832	+				-1.1
1,087,832	+				-0.4
1,087,832	+				-1.0
1,087,832	+				-0.2
1,087,832	+				+0.8
1,087,833	-				-0.2
1,087,833	-				+0.1
1,087,833	-				+1.0
1,087,833	-				-0.4
1,087,833	-				+0.8
1,087,833	-				+3.1
1,087,833	-				+1.0
1,087,833	-				-0.4
1,087,833	-				-0.5
1,087,833	-				-0.1
1,087,870	+				-1.0
1,087,870	+				-0.2
1,087,870	+				+0.1
1,087,870	+				+0.2
1,087,870	+				-0.2
1,087,871	-				-0.3
1,087,874	+				+0.6
1,087,874	+				-0.7
1,087,874	+				+1.7
1,087,874	+				-0.2
1,087,874	+				-0.8
1,087,874	+				+0.7
1,087,875	-				+1.3
1,087,875	-				+0.5
1,087,875	-				-0.0
1,087,875	-				-0.8
1,087,875	-				+0.7
1,087,875	-				-0.1
1,087,902	+				-0.4
1,087,902	+				+0.1
1,087,902	+				+1.0
1,088,122	+		AO356_04835	0.23	+0.4
1,088,122	+		AO356_04835	0.23	-0.1
1,088,122	+		AO356_04835	0.23	+1.7
1,088,122	+		AO356_04835	0.23	-0.4
1,088,122	+		AO356_04835	0.23	-0.3
1,088,122	+		AO356_04835	0.23	+0.4
1,088,123	-		AO356_04835	0.23	-1.5
1,088,123	-		AO356_04835	0.23	-1.3
1,088,123	-		AO356_04835	0.23	-1.0
1,088,298	+		AO356_04835	0.46	-0.1
1,088,384	-		AO356_04835	0.57	+0.2
1,088,389	+		AO356_04835	0.58	+0.2
1,088,389	+		AO356_04835	0.58	-2.0
1,088,389	+		AO356_04835	0.58	+0.3
1,088,390	-		AO356_04835	0.58	-1.5
1,088,390	-		AO356_04835	0.58	+1.3
1,088,390	-		AO356_04835	0.58	+1.5
1,088,470	+		AO356_04835	0.69	+0.4
1,088,471	-		AO356_04835	0.69	+0.5
1,088,471	-		AO356_04835	0.69	+0.6
1,088,528	+		AO356_04835	0.76	+0.1
1,088,528	+		AO356_04835	0.76	+0.3
1,088,528	+		AO356_04835	0.76	-0.2
1,088,529	-		AO356_04835	0.76	-0.7
1,088,529	-		AO356_04835	0.76	+0.1
1,088,529	-		AO356_04835	0.76	-1.2
1,088,572	+		AO356_04835	0.82	+0.4
1,088,572	+		AO356_04835	0.82	-1.1
1,088,572	+		AO356_04835	0.82	+0.2
1,088,572	+		AO356_04835	0.82	+1.0
1,088,572	+		AO356_04835	0.82	+0.6
1,088,572	+		AO356_04835	0.82	-0.6
1,088,573	-		AO356_04835	0.82	-0.6
1,088,573	-		AO356_04835	0.82	-0.3
1,088,573	-		AO356_04835	0.82	-0.1
1,088,573	-		AO356_04835	0.82	+0.3
1,088,678	-				-1.6
1,088,704	+				+0.2
1,088,704	+				-0.1
1,088,705	-				-0.6
1,088,705	-				+0.9
1,088,705	-				-0.5
1,088,724	+				-0.1
1,088,725	-				-0.2
1,088,725	-				+0.4
1,088,725	-				+0.7
1,089,558	+				-0.7
1,089,558	+				-0.5
1,089,558	+				+0.8
1,089,584	+				+0.7
1,089,584	+				+0.8
1,089,585	-				+0.9
1,089,619	+				+0.7
1,089,619	+				+0.3
1,089,619	+				-1.2
1,089,619	+				+0.3
1,089,619	+				+0.5
1,089,668	-				-0.2
1,089,700	+		AO356_04845	0.14	+0.0
1,089,701	-		AO356_04845	0.14	-0.5
1,089,701	-		AO356_04845	0.14	+1.8
1,089,774	+		AO356_04845	0.27	+0.9
1,089,802	+		AO356_04845	0.31	-0.4
1,089,803	-		AO356_04845	0.32	-0.3
1,089,830	+		AO356_04845	0.36	-0.5
1,089,830	+		AO356_04845	0.36	-1.2
1,089,832	+		AO356_04845	0.37	-0.2
1,089,833	-		AO356_04845	0.37	-0.5
1,089,882	+		AO356_04845	0.45	-1.4
1,089,883	-		AO356_04845	0.45	-0.5
1,089,883	-		AO356_04845	0.45	-0.5
1,089,928	+		AO356_04845	0.53	+0.5
1,089,928	+		AO356_04845	0.53	-1.0
1,089,929	-		AO356_04845	0.53	+0.5
1,089,989	-		AO356_04845	0.63	+0.5
1,090,051	+		AO356_04845	0.74	-0.1
1,090,051	+		AO356_04845	0.74	-0.1
1,090,051	+		AO356_04845	0.74	-1.1
1,090,051	+		AO356_04845	0.74	+0.4
1,090,052	-		AO356_04845	0.74	+0.6
1,090,052	-		AO356_04845	0.74	+0.2
1,090,052	-		AO356_04845	0.74	-0.3
1,090,052	-		AO356_04845	0.74	+0.9
1,090,052	-		AO356_04845	0.74	-0.4
1,090,102	+		AO356_04845	0.83	-0.8
1,090,103	-		AO356_04845	0.83	+0.6
1,090,103	-		AO356_04845	0.83	-1.2
1,090,195	+				+0.1
1,090,195	+				+0.5
1,090,195	+				-1.1
1,090,195	+				-1.7
1,090,196	-				+0.5
1,090,196	-				-0.8
1,090,214	+				-0.6
1,090,214	+				-0.1
1,090,214	+				+0.5
1,090,214	+				-0.9
1,090,215	-				+0.1
1,090,215	-				-0.5
1,090,215	-				+0.2
1,090,215	-				+0.2
1,090,237	+				+0.4
1,090,238	-				-0.2
1,090,239	+				-1.8
1,090,249	+				+1.1
1,090,299	+				-0.1
1,090,320	-				+0.7
1,090,384	+				-1.1
1,090,387	+				-2.1