Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2567
Experiment: MoYLS4 with Ceftazidime 0.9 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Ceftazidime 0.9 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,243,610 | - | DvMF_2566 | 0.27 | -0.3 | |
3,243,637 | - | DvMF_2566 | 0.29 | -0.5 | |
3,243,637 | - | DvMF_2566 | 0.29 | +0.1 | |
3,243,898 | - | DvMF_2566 | 0.50 | -0.6 | |
3,243,984 | + | DvMF_2566 | 0.57 | -0.9 | |
3,243,992 | - | DvMF_2566 | 0.58 | -0.1 | |
3,244,116 | - | DvMF_2566 | 0.67 | -0.1 | |
3,244,192 | - | DvMF_2566 | 0.74 | -0.4 | |
3,244,238 | - | DvMF_2566 | 0.77 | -0.5 | |
3,244,351 | + | DvMF_2566 | 0.86 | -0.7 | |
3,244,466 | + | +0.2 | |||
3,244,730 | + | DvMF_2567 | 0.17 | -0.7 | |
3,244,735 | + | DvMF_2567 | 0.18 | -0.7 | |
3,244,749 | - | DvMF_2567 | 0.19 | -0.5 | |
3,244,834 | + | DvMF_2567 | 0.26 | -0.9 | |
3,244,869 | + | DvMF_2567 | 0.29 | -0.4 | |
3,244,909 | + | DvMF_2567 | 0.32 | -0.6 | |
3,244,941 | - | DvMF_2567 | 0.35 | -0.2 | |
3,244,970 | + | DvMF_2567 | 0.38 | -0.3 | |
3,245,001 | + | DvMF_2567 | 0.40 | -0.7 | |
3,245,268 | + | DvMF_2567 | 0.63 | -1.4 | |
3,245,460 | - | DvMF_2567 | 0.80 | -0.5 | |
3,245,653 | + | -0.9 | |||
3,245,791 | + | -0.2 | |||
3,245,855 | + | -1.4 | |||
3,245,855 | + | -0.8 | |||
3,245,878 | - | -0.1 | |||
3,245,915 | - | -0.5 | |||
3,245,977 | - | DvMF_2568 | 0.15 | -1.3 | |
3,246,247 | + | DvMF_2568 | 0.37 | +0.9 | |
3,246,516 | + | DvMF_2568 | 0.58 | +0.2 | |
3,246,630 | - | DvMF_2568 | 0.68 | -0.4 |
Or see this region's nucleotide sequence