Experiment: MoYLS4 with Ceftazidime 0.9 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1865 and DvMF_1866 are separated by 156 nucleotides DvMF_1866 and DvMF_1867 are separated by 136 nucleotides DvMF_1867 and DvMF_1868 are separated by 4 nucleotides
DvMF_1865: DvMF_1865 - acetate kinase (RefSeq), at 2,288,798 to 2,290,012
_1865
DvMF_1866: DvMF_1866 - DRTGG domain protein (RefSeq), at 2,290,169 to 2,291,230
_1866
DvMF_1867: DvMF_1867 - protein of unknown function DUF162 (RefSeq), at 2,291,367 to 2,291,996
_1867
DvMF_1868: DvMF_1868 - protein of unknown function DUF162 (RefSeq), at 2,292,001 to 2,294,151
_1868
Position (kb)
2290
2291
2292 Strain fitness (log2 ratio)
-2
-1
0
1 at 2290.136 kb on + strand at 2290.349 kb on - strand, within DvMF_1866 at 2290.548 kb on + strand, within DvMF_1866 at 2290.572 kb on + strand, within DvMF_1866 at 2290.697 kb on - strand, within DvMF_1866 at 2290.884 kb on - strand, within DvMF_1866 at 2291.130 kb on + strand at 2291.138 kb on - strand at 2291.149 kb on + strand at 2291.369 kb on - strand at 2291.369 kb on - strand at 2291.537 kb on + strand, within DvMF_1867 at 2291.544 kb on + strand, within DvMF_1867 at 2291.563 kb on - strand, within DvMF_1867 at 2291.950 kb on - strand at 2292.084 kb on - strand at 2292.213 kb on + strand at 2292.221 kb on - strand, within DvMF_1868 at 2292.221 kb on - strand, within DvMF_1868
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Ceftazidime 0.9 mg/ml remove 2,290,136 + -0.8 2,290,349 - DvMF_1866 0.17 -1.6 2,290,548 + DvMF_1866 0.36 -1.0 2,290,572 + DvMF_1866 0.38 -1.0 2,290,697 - DvMF_1866 0.50 -1.4 2,290,884 - DvMF_1866 0.67 -1.8 2,291,130 + -0.7 2,291,138 - -0.8 2,291,149 + -0.5 2,291,369 - -1.3 2,291,369 - +0.7 2,291,537 + DvMF_1867 0.27 -0.9 2,291,544 + DvMF_1867 0.28 -0.3 2,291,563 - DvMF_1867 0.31 -0.5 2,291,950 - -0.8 2,292,084 - +0.0 2,292,213 + -0.2 2,292,221 - DvMF_1868 0.10 -1.1 2,292,221 - DvMF_1868 0.10 -0.7
Or see this region's nucleotide sequence