Experiment: MoYLS4 with Ceftazidime 0.9 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1303 and DvMF_1304 are separated by 0 nucleotides DvMF_1304 and DvMF_1305 overlap by 4 nucleotides
DvMF_1303: DvMF_1303 - baseplate assembly protein, putative (RefSeq), at 1,592,415 to 1,593,587
_1303
DvMF_1304: DvMF_1304 - hypothetical protein (RefSeq), at 1,593,588 to 1,594,259
_1304
DvMF_1305: DvMF_1305 - tail fiber protein, putative (RefSeq), at 1,594,256 to 1,595,773
_1305
Position (kb)
1593
1594
1595 Strain fitness (log2 ratio)
-1
0
1 at 1592.727 kb on - strand, within DvMF_1303 at 1593.090 kb on + strand, within DvMF_1303 at 1593.132 kb on - strand, within DvMF_1303 at 1593.147 kb on - strand, within DvMF_1303 at 1593.346 kb on + strand, within DvMF_1303 at 1593.383 kb on + strand, within DvMF_1303 at 1593.383 kb on + strand, within DvMF_1303 at 1593.391 kb on - strand, within DvMF_1303 at 1593.391 kb on - strand, within DvMF_1303 at 1593.391 kb on - strand, within DvMF_1303 at 1593.391 kb on - strand, within DvMF_1303 at 1593.526 kb on + strand at 1593.548 kb on - strand at 1593.892 kb on + strand, within DvMF_1304 at 1593.954 kb on - strand, within DvMF_1304 at 1594.239 kb on - strand at 1594.466 kb on + strand, within DvMF_1305 at 1594.568 kb on - strand, within DvMF_1305 at 1594.667 kb on - strand, within DvMF_1305 at 1594.672 kb on - strand, within DvMF_1305 at 1594.672 kb on - strand, within DvMF_1305 at 1594.700 kb on - strand, within DvMF_1305 at 1594.745 kb on - strand, within DvMF_1305 at 1594.776 kb on + strand, within DvMF_1305 at 1594.901 kb on + strand, within DvMF_1305 at 1594.907 kb on + strand, within DvMF_1305 at 1594.956 kb on - strand, within DvMF_1305 at 1594.989 kb on - strand, within DvMF_1305
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Ceftazidime 0.9 mg/ml remove 1,592,727 - DvMF_1303 0.27 -0.7 1,593,090 + DvMF_1303 0.58 -1.7 1,593,132 - DvMF_1303 0.61 -0.8 1,593,147 - DvMF_1303 0.62 -0.4 1,593,346 + DvMF_1303 0.79 -1.1 1,593,383 + DvMF_1303 0.83 -1.0 1,593,383 + DvMF_1303 0.83 -0.4 1,593,391 - DvMF_1303 0.83 -0.8 1,593,391 - DvMF_1303 0.83 -0.4 1,593,391 - DvMF_1303 0.83 -1.0 1,593,391 - DvMF_1303 0.83 -0.3 1,593,526 + -0.2 1,593,548 - -0.8 1,593,892 + DvMF_1304 0.45 -0.9 1,593,954 - DvMF_1304 0.54 -0.5 1,594,239 - -0.7 1,594,466 + DvMF_1305 0.14 -0.7 1,594,568 - DvMF_1305 0.21 -0.4 1,594,667 - DvMF_1305 0.27 -0.5 1,594,672 - DvMF_1305 0.27 -0.8 1,594,672 - DvMF_1305 0.27 -0.9 1,594,700 - DvMF_1305 0.29 -0.7 1,594,745 - DvMF_1305 0.32 -0.6 1,594,776 + DvMF_1305 0.34 -0.6 1,594,901 + DvMF_1305 0.42 -0.4 1,594,907 + DvMF_1305 0.43 -0.4 1,594,956 - DvMF_1305 0.46 -0.1 1,594,989 - DvMF_1305 0.48 -1.1
Or see this region's nucleotide sequence