Strain Fitness in Shewanella loihica PV-4 around Shew_0980

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,126,126	-		Shew_0979	0.74	-0.3
1,126,217	+		Shew_0979	0.77	+0.1
1,126,446	+		Shew_0979	0.87	+0.5
1,126,454	-		Shew_0979	0.87	+0.1
1,126,530	-				+0.3
1,126,625	+				+0.3
1,126,625	+				+0.4
1,126,698	+				+0.1
1,126,706	-				-0.9
1,126,933	+				-0.1
1,127,208	+				-0.2
1,127,216	-				+0.2
1,127,216	-				+0.4
1,127,216	-				-0.2
1,127,301	-				+0.6
1,127,324	-				+0.1
1,127,379	+		Shew_0980	0.10	+0.3
1,127,455	+		Shew_0980	0.13	+0.3
1,127,706	-		Shew_0980	0.20	-1.1
1,127,835	-		Shew_0980	0.23	+0.1
1,127,925	-		Shew_0980	0.26	-0.3
1,128,213	-		Shew_0980	0.34	+0.2
1,128,312	-		Shew_0980	0.37	+0.1
1,128,402	+		Shew_0980	0.40	+0.0
1,128,697	+		Shew_0980	0.48	-0.0
1,128,697	+		Shew_0980	0.48	+0.1
1,128,767	-		Shew_0980	0.50	+0.3
1,129,309	-		Shew_0980	0.65	-0.3
1,129,459	-		Shew_0980	0.70	-0.1
1,129,698	-		Shew_0980	0.76	+0.5
1,129,742	-		Shew_0980	0.78	+0.3
1,129,742	-		Shew_0980	0.78	-0.0
1,129,819	+		Shew_0980	0.80	+0.2
1,130,132	+		Shew_0980	0.89	+0.0
1,130,175	+		Shew_0980	0.90	+0.1
1,130,231	+				-0.1
1,130,344	+				+0.2
1,130,690	+		Shew_0981	0.28	+0.1
1,130,715	+		Shew_0981	0.33	+0.7
1,130,877	+		Shew_0981	0.68	+0.8
1,130,885	-		Shew_0981	0.69	+0.4
1,130,983	-				+0.2
1,131,025	-				-0.1
1,131,025	-				+0.2
1,131,025	-				+0.1
1,131,144	+				+0.3
1,131,144	+				+0.3
1,131,172	+				-0.1
1,131,250	+				-0.1
1,131,523	+				-0.2