Experiment: m.b. Cobalt chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1381 and Dshi_1382 overlap by 1 nucleotides Dshi_1382 and Dshi_1383 overlap by 4 nucleotides Dshi_1383 and Dshi_1384 are separated by 64 nucleotides
Dshi_1381: Dshi_1381 - Amidohydrolase 3 (RefSeq), at 1,434,352 to 1,435,626
_1381
Dshi_1382: Dshi_1382 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 1,435,626 to 1,436,483
_1382
Dshi_1383: Dshi_1383 - ABC transporter related (RefSeq), at 1,436,480 to 1,437,289
_1383
Dshi_1384: Dshi_1384 - permease protein of ABC transporter (RefSeq), at 1,437,354 to 1,438,355
_1384
Position (kb)
1435
1436
1437 Strain fitness (log2 ratio)
-2
-1
0
1 at 1434.767 kb on - strand, within Dshi_1381 at 1434.808 kb on + strand, within Dshi_1381 at 1434.828 kb on + strand, within Dshi_1381 at 1434.836 kb on - strand, within Dshi_1381 at 1434.927 kb on + strand, within Dshi_1381 at 1435.074 kb on - strand, within Dshi_1381 at 1435.087 kb on + strand, within Dshi_1381 at 1435.241 kb on + strand, within Dshi_1381 at 1435.271 kb on - strand, within Dshi_1381 at 1435.293 kb on + strand, within Dshi_1381 at 1435.345 kb on + strand, within Dshi_1381 at 1435.428 kb on - strand, within Dshi_1381 at 1435.474 kb on - strand, within Dshi_1381 at 1435.489 kb on - strand, within Dshi_1381 at 1435.532 kb on + strand at 1435.542 kb on + strand at 1435.608 kb on + strand at 1435.670 kb on + strand at 1435.670 kb on + strand at 1435.699 kb on - strand at 1435.801 kb on - strand, within Dshi_1382 at 1435.897 kb on + strand, within Dshi_1382 at 1435.967 kb on + strand, within Dshi_1382 at 1435.975 kb on - strand, within Dshi_1382 at 1436.134 kb on - strand, within Dshi_1382 at 1436.318 kb on - strand, within Dshi_1382 at 1436.366 kb on - strand, within Dshi_1382 at 1436.473 kb on + strand at 1436.517 kb on - strand at 1436.562 kb on + strand, within Dshi_1383 at 1436.802 kb on + strand, within Dshi_1383 at 1436.820 kb on + strand, within Dshi_1383 at 1436.838 kb on + strand, within Dshi_1383 at 1436.961 kb on - strand, within Dshi_1383 at 1437.037 kb on + strand, within Dshi_1383 at 1437.160 kb on + strand, within Dshi_1383 at 1437.326 kb on - strand at 1437.448 kb on + strand at 1437.482 kb on + strand, within Dshi_1384
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.5 mM remove 1,434,767 - Dshi_1381 0.33 +0.4 1,434,808 + Dshi_1381 0.36 +0.2 1,434,828 + Dshi_1381 0.37 -0.4 1,434,836 - Dshi_1381 0.38 +0.0 1,434,927 + Dshi_1381 0.45 +0.7 1,435,074 - Dshi_1381 0.57 -0.8 1,435,087 + Dshi_1381 0.58 -0.7 1,435,241 + Dshi_1381 0.70 -0.3 1,435,271 - Dshi_1381 0.72 +0.7 1,435,293 + Dshi_1381 0.74 +0.6 1,435,345 + Dshi_1381 0.78 +1.3 1,435,428 - Dshi_1381 0.84 +0.3 1,435,474 - Dshi_1381 0.88 -2.0 1,435,489 - Dshi_1381 0.89 +0.9 1,435,532 + -0.4 1,435,542 + -1.6 1,435,608 + -0.6 1,435,670 + -0.7 1,435,670 + -0.5 1,435,699 - +0.0 1,435,801 - Dshi_1382 0.20 -0.8 1,435,897 + Dshi_1382 0.32 -0.4 1,435,967 + Dshi_1382 0.40 -1.9 1,435,975 - Dshi_1382 0.41 +0.0 1,436,134 - Dshi_1382 0.59 +0.0 1,436,318 - Dshi_1382 0.81 -0.8 1,436,366 - Dshi_1382 0.86 -0.5 1,436,473 + -0.7 1,436,517 - +0.8 1,436,562 + Dshi_1383 0.10 +0.7 1,436,802 + Dshi_1383 0.40 +0.0 1,436,820 + Dshi_1383 0.42 -0.3 1,436,838 + Dshi_1383 0.44 -0.1 1,436,961 - Dshi_1383 0.59 +0.6 1,437,037 + Dshi_1383 0.69 -0.6 1,437,160 + Dshi_1383 0.84 +0.0 1,437,326 - +1.0 1,437,448 + +0.9 1,437,482 + Dshi_1384 0.13 +0.5
Or see this region's nucleotide sequence