Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3627

Experiment: KB with capsaicin 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with capsaicin 0.125 mg/ml
4,309,423	+				+0.4
4,309,517	-				+2.9
4,309,517	-				+0.6
4,309,543	+				+1.9
4,309,543	+				+0.9
4,309,543	+				+0.6
4,309,544	-				+0.8
4,309,544	-				+0.6
4,309,544	-				-0.7
4,309,548	+				+1.0
4,309,549	-				-1.7
4,309,579	+				-0.4
4,309,580	-				+0.7
4,309,664	+		Psyr_3626	0.18	-1.3
4,309,665	-		Psyr_3626	0.18	-0.7
4,309,665	-		Psyr_3626	0.18	+0.9
4,309,694	+		Psyr_3626	0.24	-0.6
4,309,695	-		Psyr_3626	0.24	-0.1
4,309,695	-		Psyr_3626	0.24	-0.7
4,309,727	+		Psyr_3626	0.31	+0.0
4,309,728	-		Psyr_3626	0.31	+0.5
4,309,736	+		Psyr_3626	0.33	+0.9
4,309,950	+		Psyr_3626	0.78	+0.0
4,310,172	+				-1.1
4,310,256	+				+1.9
4,310,256	+				-0.1
4,310,404	-		Psyr_3627	0.38	-0.4
4,310,491	+		Psyr_3627	0.59	-0.7
4,310,491	+		Psyr_3627	0.59	+0.9
4,310,610	+		Psyr_3627	0.87	-2.4
4,310,653	+				+1.0
4,310,654	-				-2.8
4,310,767	+				-0.0
4,310,767	+				-0.2
4,310,767	+				+2.9
4,310,767	+				-0.7
4,310,767	+				-0.1
4,310,767	+				-0.7
4,310,767	+				-0.5
4,310,767	+				+1.0
4,310,768	-				-2.1
4,310,768	-				+0.9
4,310,768	-				+0.6
4,310,768	-				-0.1
4,310,768	-				-0.2
4,310,768	-				-0.1
4,310,768	-				-0.3
4,310,768	-				-0.9
4,311,363	-				+1.1
4,311,421	-				-0.4
4,311,421	-				-1.0
4,311,439	-				-0.7
4,311,439	-				+3.6
4,311,448	-				+0.1
4,311,448	-				-0.1
4,311,452	-				-0.1
4,311,452	-				-0.5