Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3115

Experiment: KB with capsaicin 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with capsaicin 0.125 mg/ml
3,732,666	-		Psyr_3114	0.57	-0.5
3,732,792	-		Psyr_3114	0.64	+0.1
3,732,862	+		Psyr_3114	0.69	-0.6
3,732,862	+		Psyr_3114	0.69	-0.2
3,732,862	+		Psyr_3114	0.69	-0.3
3,732,862	+		Psyr_3114	0.69	-0.0
3,732,863	-		Psyr_3114	0.69	+2.1
3,732,863	-		Psyr_3114	0.69	+0.7
3,732,863	-		Psyr_3114	0.69	-0.8
3,732,863	-		Psyr_3114	0.69	-1.1
3,732,863	-		Psyr_3114	0.69	-0.5
3,732,863	-		Psyr_3114	0.69	+0.7
3,732,863	-		Psyr_3114	0.69	+0.7
3,733,120	+		Psyr_3114	0.85	-0.5
3,733,316	+				-1.9
3,733,316	+				+0.1
3,733,316	+				-0.1
3,733,362	+				-0.1
3,733,384	+				-0.2
3,733,386	+				-0.8
3,733,453	-				-0.3
3,733,488	+				-1.1
3,733,488	+				+0.5
3,733,492	+				+0.7
3,733,493	-				-0.9
3,733,682	+		Psyr_3115	0.12	-0.6
3,733,682	+		Psyr_3115	0.12	-1.0
3,733,682	+		Psyr_3115	0.12	+1.1
3,733,682	+		Psyr_3115	0.12	-0.9
3,733,682	+		Psyr_3115	0.12	-0.6
3,733,683	-		Psyr_3115	0.12	-1.1
3,733,683	-		Psyr_3115	0.12	-1.3
3,733,683	-		Psyr_3115	0.12	-0.5
3,733,683	-		Psyr_3115	0.12	-1.4
3,733,683	-		Psyr_3115	0.12	+0.4
3,733,683	-		Psyr_3115	0.12	-1.3
3,733,904	+		Psyr_3115	0.32	+0.5
3,734,674	+				-0.9
3,734,675	-				-0.3
3,734,675	-				+2.5
3,734,828	+				-1.1
3,734,829	-				-0.1
3,734,855	+				-0.3
3,734,856	-				+1.1
3,734,856	-				+1.0
3,734,856	-				+1.2
3,734,856	-				+0.5
3,734,856	-				+0.1
3,734,856	-				+0.9
3,734,856	-				+1.3
3,734,958	-		Psyr_3116	0.15	-0.6
3,735,287	+		Psyr_3116	0.45	-1.3
3,735,288	-		Psyr_3116	0.45	-1.6
3,735,288	-		Psyr_3116	0.45	-1.3
3,735,395	-		Psyr_3116	0.55	-1.1
3,735,582	-		Psyr_3116	0.72	-0.7
3,735,652	+		Psyr_3116	0.79	-1.2
3,735,653	-		Psyr_3116	0.79	-0.1