Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2456

Experiment: KB with capsaicin 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with capsaicin 0.125 mg/ml
2,843,565	+		Psyr_2455	0.23	+0.7
2,843,570	+		Psyr_2455	0.23	-0.6
2,843,655	-		Psyr_2455	0.31	+0.1
2,843,788	+		Psyr_2455	0.42	+0.7
2,844,032	+		Psyr_2455	0.64	-0.1
2,844,033	-		Psyr_2455	0.64	+0.1
2,844,033	-		Psyr_2455	0.64	-0.0
2,844,033	-		Psyr_2455	0.64	-0.9
2,844,033	-		Psyr_2455	0.64	+0.6
2,844,038	+		Psyr_2455	0.64	+0.3
2,844,128	+		Psyr_2455	0.72	-1.1
2,844,208	+		Psyr_2455	0.79	+0.1
2,844,208	+		Psyr_2455	0.79	+0.7
2,844,595	+				-1.7
2,844,596	-				+0.6
2,844,597	+				+1.5
2,844,597	+				-1.1
2,844,597	+				+0.4
2,844,597	+				-0.3
2,844,598	-				+0.5
2,844,769	+		Psyr_2456	0.28	+1.1
2,845,095	-		Psyr_2456	0.71	+1.2
2,845,095	-		Psyr_2456	0.71	-2.6
2,845,302	-				-0.2
2,845,458	+		Psyr_2457	0.10	-0.2
2,845,458	+		Psyr_2457	0.10	-0.7
2,845,458	+		Psyr_2457	0.10	-0.3
2,845,458	+		Psyr_2457	0.10	-0.9
2,845,458	+		Psyr_2457	0.10	-0.6
2,845,459	+		Psyr_2457	0.11	-0.9
2,845,459	-				+1.3
2,845,459	-		Psyr_2457	0.11	-2.7
2,845,459	-		Psyr_2457	0.11	+1.1
2,845,459	-		Psyr_2457	0.11	-0.7
2,845,503	+		Psyr_2457	0.15	-0.7
2,845,503	+		Psyr_2457	0.15	+0.1
2,845,503	+		Psyr_2457	0.15	+3.3
2,845,504	-		Psyr_2457	0.15	-0.0
2,845,504	-		Psyr_2457	0.15	-1.4
2,845,504	-		Psyr_2457	0.15	-0.3
2,845,504	-		Psyr_2457	0.15	+0.2
2,845,504	-		Psyr_2457	0.15	-0.9
2,845,507	-		Psyr_2457	0.15	+1.5
2,845,507	-		Psyr_2457	0.15	+0.1
2,845,523	+		Psyr_2457	0.17	+0.3
2,845,548	+		Psyr_2457	0.19	-0.3
2,845,548	+		Psyr_2457	0.19	-0.5
2,845,548	+		Psyr_2457	0.19	-0.6
2,845,548	+		Psyr_2457	0.19	+0.5
2,845,904	+		Psyr_2457	0.52	+0.6
2,845,904	+		Psyr_2457	0.52	-2.6
2,845,904	+		Psyr_2457	0.52	+1.2
2,845,905	-		Psyr_2457	0.52	-0.6
2,845,908	+		Psyr_2457	0.53	+0.5
2,845,909	-		Psyr_2457	0.53	+0.5
2,845,970	+		Psyr_2457	0.58	-2.1
2,846,082	+		Psyr_2457	0.69	+0.7
2,846,082	+		Psyr_2457	0.69	+0.4
2,846,083	-		Psyr_2457	0.69	-0.3
2,846,124	+		Psyr_2457	0.73	-0.3
2,846,124	+		Psyr_2457	0.73	-0.9
2,846,266	-		Psyr_2457	0.86	-0.3
2,846,266	-		Psyr_2457	0.86	-0.9
2,846,266	-		Psyr_2457	0.86	-1.2