Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2441

Experiment: KB with capsaicin 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with capsaicin 0.125 mg/ml
2,825,587	-		Psyr_2440	0.47	+0.2
2,825,595	-		Psyr_2440	0.48	-0.2
2,825,595	-		Psyr_2440	0.48	-2.3
2,825,595	-		Psyr_2440	0.48	-1.9
2,825,669	+		Psyr_2440	0.54	+0.3
2,825,741	+		Psyr_2440	0.59	-0.6
2,825,799	+		Psyr_2440	0.63	+1.0
2,825,852	+		Psyr_2440	0.67	+1.5
2,825,852	+		Psyr_2440	0.67	-3.4
2,825,852	+		Psyr_2440	0.67	+0.7
2,825,852	+		Psyr_2440	0.67	+1.7
2,825,853	-		Psyr_2440	0.67	+2.0
2,825,874	-		Psyr_2440	0.69	-0.8
2,825,874	-		Psyr_2440	0.69	-0.0
2,825,874	-		Psyr_2440	0.69	-0.4
2,825,921	-		Psyr_2440	0.73	-0.3
2,825,948	+		Psyr_2440	0.75	+0.1
2,825,948	+		Psyr_2440	0.75	-1.4
2,825,949	-		Psyr_2440	0.75	+0.1
2,825,949	-		Psyr_2440	0.75	-2.3
2,826,011	+		Psyr_2440	0.79	-0.6
2,826,011	+		Psyr_2440	0.79	-0.2
2,826,011	+		Psyr_2440	0.79	+0.9
2,826,011	+		Psyr_2440	0.79	-0.7
2,826,011	+		Psyr_2440	0.79	+2.3
2,826,011	+		Psyr_2440	0.79	-0.1
2,826,011	+		Psyr_2440	0.79	+0.3
2,826,011	+		Psyr_2440	0.79	-0.3
2,826,012	-		Psyr_2440	0.80	+0.1
2,826,012	-		Psyr_2440	0.80	-1.4
2,826,012	-		Psyr_2440	0.80	+0.4
2,826,012	-		Psyr_2440	0.80	-1.1
2,826,012	-		Psyr_2440	0.80	-1.3
2,826,012	-		Psyr_2440	0.80	+0.4
2,826,012	-		Psyr_2440	0.80	-1.1
2,826,326	+				-0.7
2,826,370	+				-0.4
2,826,370	+				+0.4
2,826,371	-				+0.0
2,826,625	-		Psyr_2441	0.11	-0.4
2,826,703	-		Psyr_2441	0.19	+0.7
2,826,767	+		Psyr_2441	0.26	+0.6
2,826,768	-		Psyr_2441	0.27	+0.7
2,826,837	+		Psyr_2441	0.34	-0.2
2,826,838	-		Psyr_2441	0.34	-0.4
2,827,194	+		Psyr_2441	0.73	+0.4
2,827,194	+		Psyr_2441	0.73	+0.9
2,827,194	+		Psyr_2441	0.73	-0.4
2,827,250	+		Psyr_2441	0.79	+0.8
2,827,250	+		Psyr_2441	0.79	+1.3
2,827,302	-		Psyr_2441	0.84	+1.7
2,827,302	-		Psyr_2441	0.84	+0.5
2,827,356	-				-1.4
2,827,356	-				-1.3
2,827,422	+				+0.5
2,827,423	-				-0.9
2,827,423	-				-1.2
2,827,462	+				-0.8
2,827,660	-		Psyr_2442	0.15	+1.3
2,827,707	+		Psyr_2442	0.21	+2.1
2,827,707	+		Psyr_2442	0.21	+0.7
2,827,707	+		Psyr_2442	0.21	+1.2
2,827,709	+		Psyr_2442	0.21	-0.5
2,827,709	+		Psyr_2442	0.21	+0.7
2,827,709	+		Psyr_2442	0.21	+0.1
2,827,709	+		Psyr_2442	0.21	+0.3
2,827,710	-		Psyr_2442	0.21	-1.1
2,827,710	-		Psyr_2442	0.21	-0.0
2,827,896	+		Psyr_2442	0.46	+0.5
2,827,904	+		Psyr_2442	0.47	-1.0
2,827,905	-		Psyr_2442	0.47	+0.1
2,827,905	-		Psyr_2442	0.47	-0.9
2,828,136	-		Psyr_2442	0.77	-0.0
2,828,157	+		Psyr_2442	0.80	+0.2
2,828,158	-		Psyr_2442	0.80	+1.6
2,828,158	-		Psyr_2442	0.80	+0.7
2,828,158	-		Psyr_2442	0.80	-0.6
2,828,158	-		Psyr_2442	0.80	-0.9
2,828,169	+		Psyr_2442	0.82	+0.3
2,828,280	-				-1.7
2,828,283	+				+2.0
2,828,283	+				+0.9
2,828,283	+				+0.1
2,828,283	+				-0.5
2,828,283	+				+0.1
2,828,283	+				-0.6
2,828,283	+				+1.1
2,828,283	+				+0.5
2,828,283	+				-1.0
2,828,284	-				-0.7
2,828,284	-				+0.4
2,828,284	-				+0.0
2,828,284	-				+1.1
2,828,358	+				+0.3
2,828,358	+				-1.2
2,828,358	+				+0.9
2,828,358	+				-1.6
2,828,358	+				+3.0
2,828,358	+				+0.3
2,828,358	+				-0.4
2,828,358	+				-1.0
2,828,359	-				+0.1
2,828,359	-				+0.5
2,828,359	-				+2.0
2,828,359	-				-0.9
2,828,359	-				-0.1
2,828,359	-				+0.7