Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_0148

Experiment: KB with capsaicin 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with capsaicin 0.125 mg/ml
159,908	+				-0.2
159,908	+				+0.3
160,020	-		Psyr_0147	0.14	-0.6
160,020	-		Psyr_0147	0.14	+0.1
160,333	+		Psyr_0147	0.47	-0.2
160,333	+		Psyr_0147	0.47	-0.5
160,334	-		Psyr_0147	0.47	+0.9
160,334	-		Psyr_0147	0.47	-0.3
160,415	+		Psyr_0147	0.56	+1.0
160,416	-		Psyr_0147	0.56	-0.0
160,416	-		Psyr_0147	0.56	+0.1
160,416	-		Psyr_0147	0.56	-0.8
160,556	-		Psyr_0147	0.71	+0.5
160,556	-		Psyr_0147	0.71	-0.3
160,817	+				+1.2
160,820	+				+0.1
160,821	-				-0.3
160,821	-				-0.1
160,821	-				+0.9
160,821	-				-0.7
160,821	-				-1.5
160,857	+				+0.9
160,857	+				-0.2
160,857	+				+0.7
160,857	+				-0.1
160,858	-				+0.5
161,013	+		Psyr_0148	0.59	-0.5
161,013	+		Psyr_0148	0.59	+1.0
161,013	+		Psyr_0148	0.59	+0.2
161,013	+		Psyr_0148	0.59	+1.3
161,013	+		Psyr_0148	0.59	-0.9
161,014	-		Psyr_0148	0.59	+2.0
161,067	+		Psyr_0148	0.81	-0.6
161,067	+		Psyr_0148	0.81	+1.2
161,128	+				-0.7
161,190	+				-0.2
161,190	+				-1.4
161,191	-				-0.4
161,227	-				+0.1
161,227	-				+0.6
161,388	+		Psyr_0149	0.14	-2.3
161,388	+		Psyr_0149	0.14	-0.5
161,389	-		Psyr_0149	0.14	-0.8
161,389	-		Psyr_0149	0.14	-0.3
161,389	-		Psyr_0149	0.14	+0.5
161,389	-		Psyr_0149	0.14	+0.5
161,392	-		Psyr_0149	0.14	+0.9
161,392	-		Psyr_0149	0.14	+1.9
161,526	-		Psyr_0149	0.23	-0.4
161,733	+		Psyr_0149	0.37	+0.3
161,734	-		Psyr_0149	0.37	-1.4
161,734	-		Psyr_0149	0.37	-0.4
162,037	+		Psyr_0149	0.58	+0.7