Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS17970

Experiment: R2A with lithium chloride 15.625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with lithium chloride 15.625 mM
3,921,658	+		LRK54_RS17965	0.30	-1.8
3,921,658	+		LRK54_RS17965	0.30	+0.7
3,921,658	+		LRK54_RS17965	0.30	-0.7
3,921,658	+		LRK54_RS17965	0.30	-0.8
3,921,658	+		LRK54_RS17965	0.30	-1.8
3,921,658	+		LRK54_RS17965	0.30	+0.1
3,921,659	-		LRK54_RS17965	0.30	+0.7
3,921,659	-		LRK54_RS17965	0.30	+1.4
3,921,763	+		LRK54_RS17965	0.40	+0.7
3,921,763	+		LRK54_RS17965	0.40	+2.0
3,921,763	+		LRK54_RS17965	0.40	-0.3
3,921,763	+		LRK54_RS17965	0.40	+0.7
3,921,764	-		LRK54_RS17965	0.40	-0.5
3,921,893	+		LRK54_RS17965	0.52	+0.8
3,921,893	+		LRK54_RS17965	0.52	-1.2
3,921,893	+		LRK54_RS17965	0.52	-0.1
3,921,893	+		LRK54_RS17965	0.52	-1.6
3,921,893	+		LRK54_RS17965	0.52	-0.0
3,921,893	+		LRK54_RS17965	0.52	+0.8
3,921,893	+		LRK54_RS17965	0.52	+2.0
3,921,893	+		LRK54_RS17965	0.52	+0.1
3,921,893	+		LRK54_RS17965	0.52	+2.3
3,921,894	-		LRK54_RS17965	0.52	+0.1
3,921,894	-		LRK54_RS17965	0.52	-1.3
3,921,894	-		LRK54_RS17965	0.52	+3.3
3,921,894	-		LRK54_RS17965	0.52	-0.5
3,921,894	-		LRK54_RS17965	0.52	-0.8
3,921,894	-		LRK54_RS17965	0.52	+0.6
3,921,894	-		LRK54_RS17965	0.52	+2.0
3,921,894	-		LRK54_RS17965	0.52	+1.3
3,921,894	-		LRK54_RS17965	0.52	+1.3
3,921,894	-		LRK54_RS17965	0.52	+0.4
3,921,894	-		LRK54_RS17965	0.52	+0.6
3,921,894	-		LRK54_RS17965	0.52	+0.7
3,921,931	+		LRK54_RS17965	0.56	+1.0
3,921,931	+		LRK54_RS17965	0.56	+0.3
3,921,931	+		LRK54_RS17965	0.56	+1.0
3,921,931	+		LRK54_RS17965	0.56	+0.1
3,921,931	+		LRK54_RS17965	0.56	-0.0
3,921,932	-		LRK54_RS17965	0.56	-1.3
3,921,932	-		LRK54_RS17965	0.56	+1.2
3,921,932	-		LRK54_RS17965	0.56	+0.2
3,921,932	-		LRK54_RS17965	0.56	+1.0
3,921,932	-		LRK54_RS17965	0.56	+3.1
3,921,932	-		LRK54_RS17965	0.56	+2.2
3,922,091	+		LRK54_RS17965	0.71	-0.0
3,922,091	+		LRK54_RS17965	0.71	-0.3
3,922,091	+		LRK54_RS17965	0.71	+1.7
3,922,091	+		LRK54_RS17965	0.71	-0.0
3,922,092	-		LRK54_RS17965	0.71	-0.5
3,922,092	-		LRK54_RS17965	0.71	-0.7
3,922,092	-		LRK54_RS17965	0.71	+2.0
3,922,092	-		LRK54_RS17965	0.71	+0.7
3,922,092	-		LRK54_RS17965	0.71	+0.5
3,922,092	-		LRK54_RS17965	0.71	+1.4
3,922,197	+		LRK54_RS17965	0.80	-2.0
3,922,197	+		LRK54_RS17965	0.80	+0.5
3,922,197	+		LRK54_RS17965	0.80	-0.0
3,922,197	+		LRK54_RS17965	0.80	+0.4
3,922,197	+		LRK54_RS17965	0.80	+0.8
3,922,197	+		LRK54_RS17965	0.80	-3.3
3,922,197	+		LRK54_RS17965	0.80	-0.3
3,922,197	+		LRK54_RS17965	0.80	+0.6
3,922,197	+		LRK54_RS17965	0.80	-0.8
3,922,197	+		LRK54_RS17965	0.80	-1.2
3,922,197	+		LRK54_RS17965	0.80	-1.0
3,922,197	+		LRK54_RS17965	0.80	-0.7
3,922,197	+		LRK54_RS17965	0.80	-1.0
3,922,197	+		LRK54_RS17965	0.80	-1.3
3,922,198	-		LRK54_RS17965	0.81	+1.5
3,922,198	-		LRK54_RS17965	0.81	+1.0
3,922,198	-		LRK54_RS17965	0.81	-0.0
3,922,198	-		LRK54_RS17965	0.81	+1.3
3,922,198	-		LRK54_RS17965	0.81	+1.1
3,922,198	-		LRK54_RS17965	0.81	+1.0
3,922,198	-		LRK54_RS17965	0.81	+3.0
3,922,198	-		LRK54_RS17965	0.81	+2.1
3,922,198	-		LRK54_RS17965	0.81	+0.2
3,922,198	-		LRK54_RS17965	0.81	+2.7
3,922,198	-		LRK54_RS17965	0.81	+2.3
3,922,198	-		LRK54_RS17965	0.81	+1.0
3,922,198	-		LRK54_RS17965	0.81	+1.9
3,922,198	-		LRK54_RS17965	0.81	+0.1
3,922,198	-		LRK54_RS17965	0.81	+1.5
3,922,198	-		LRK54_RS17965	0.81	-0.3
3,922,198	-		LRK54_RS17965	0.81	+0.9
3,922,198	-		LRK54_RS17965	0.81	+1.3
3,922,198	-		LRK54_RS17965	0.81	+0.1
3,922,198	-		LRK54_RS17965	0.81	+0.4
3,922,198	-		LRK54_RS17965	0.81	-0.3
3,922,198	-		LRK54_RS17965	0.81	-0.2
3,922,198	-		LRK54_RS17965	0.81	+1.3
3,922,265	+		LRK54_RS17965	0.87	+0.8
3,922,265	+		LRK54_RS17965	0.87	-2.2
3,922,265	+		LRK54_RS17965	0.87	-0.3
3,922,265	+		LRK54_RS17965	0.87	+0.3
3,922,265	+		LRK54_RS17965	0.87	-0.6
3,922,265	+		LRK54_RS17965	0.87	-1.5
3,922,265	+		LRK54_RS17965	0.87	-0.0
3,922,266	-		LRK54_RS17965	0.87	+0.4
3,922,266	-		LRK54_RS17965	0.87	+0.1
3,922,266	-		LRK54_RS17965	0.87	+1.8
3,922,266	-		LRK54_RS17965	0.87	+1.6
3,922,266	-		LRK54_RS17965	0.87	+3.3
3,922,266	-		LRK54_RS17965	0.87	+1.6
3,922,325	+				-2.8
3,922,325	+				-0.7
3,922,325	+				-1.9
3,922,325	+				-2.4
3,922,325	+				-0.0
3,922,325	+				-1.3
3,922,326	-				+1.7
3,922,326	-				+0.5
3,922,326	-				+1.4
3,922,326	-				+2.2
3,922,326	-				+1.3
3,922,326	-				+1.9
3,922,326	-				+0.1
3,922,326	-				+2.9
3,922,326	-				+2.7
3,922,326	-				+3.2
3,922,326	-				+2.9
3,922,326	-				+1.8
3,922,326	-				+0.5
3,922,326	-				+1.9
3,922,326	-				+1.7
3,922,326	-				-1.8
3,922,326	-				-0.6
3,922,326	-				+0.2
3,922,326	-				+1.0
3,922,326	-				+1.4
3,922,400	+				-0.3
3,922,401	+				-0.0
3,922,401	+				-0.3
3,922,401	+				-0.3
3,922,401	+				-1.0
3,922,401	+				+0.2
3,922,401	+				+0.4
3,922,401	+				-0.9
3,922,401	+				-0.7
3,922,401	+				+2.0
3,922,401	+				-1.0
3,922,401	+				+0.4
3,922,401	+				-2.4
3,922,401	+				+0.4
3,922,401	+				-0.7
3,922,401	+				+0.2
3,922,401	+				+0.7
3,922,401	+				-0.0
3,922,401	+				-0.9
3,922,401	+				-3.2
3,922,401	+				-0.6
3,922,401	+				-2.2
3,922,401	+				-0.1
3,922,401	+				-0.6
3,922,401	+				-0.3
3,922,401	+				-1.8
3,922,401	+				-0.0
3,922,401	+				+1.7
3,922,401	+				-2.8
3,922,401	+				+0.4
3,922,401	+				-1.2
3,922,401	+				-1.1
3,922,401	+				+0.2
3,922,401	+				-2.2
3,922,401	+				-1.5
3,922,401	+				+1.0
3,922,401	+				+1.0
3,922,401	+				-4.1
3,922,401	+				-1.0
3,922,402	-				+2.4
3,922,402	-				+1.4
3,922,402	-				+3.3
3,922,402	-				+2.5
3,922,402	-				+3.0
3,922,402	-				+2.9
3,922,402	-				+3.2
3,922,402	-				+2.4
3,922,402	-				+2.6
3,922,402	-				+1.8
3,922,402	-				+2.8
3,922,402	-				+2.6
3,922,402	-				+0.4
3,922,402	-				+2.4
3,922,402	-				+2.3
3,922,402	-				+3.5
3,922,402	-				+2.8
3,922,402	-				+2.2
3,922,402	-				+1.2
3,922,402	-				+2.1
3,922,402	-				+3.2
3,922,402	-				+2.0
3,922,402	-				+2.0
3,922,402	-				+3.8
3,922,402	-				+2.5
3,922,402	-				+2.9
3,922,402	-				+2.6
3,922,402	-				+3.3
3,922,402	-				+1.5
3,922,402	-				+2.1
3,922,402	-				+2.8
3,922,402	-				+2.4
3,922,402	-				+2.2
3,922,402	-				+2.7
3,922,402	-				+2.6
3,922,402	-				+1.3
3,922,402	-				+2.0
3,922,402	-				-0.3
3,922,402	-				+1.1
3,922,402	-				+1.2
3,922,402	-				+2.1
3,922,402	-				+2.4
3,922,402	-				+1.2
3,922,402	-				+2.1
3,922,402	-				-0.0
3,922,403	+				-0.0
3,922,403	+				-0.7
3,922,403	+				+0.4
3,922,403	+				-0.6
3,922,403	+				-0.3
3,922,403	+				-1.3
3,922,403	+				-0.0
3,922,403	+				-0.0
3,922,403	+				-1.0
3,922,403	+				-0.3
3,922,403	+				-2.4
3,922,403	+				-0.0
3,922,403	+				-0.6
3,922,403	+				-0.3
3,922,403	+				-0.5
3,922,403	+				-1.6
3,922,404	-				-0.8
3,922,404	-				+0.4
3,922,404	-				-1.5
3,922,404	-				+0.5
3,922,404	-				+0.6
3,922,404	-				-0.5
3,922,404	-				+1.4
3,922,404	-				+0.4
3,922,404	-				+0.4
3,922,404	-				+1.8
3,922,404	-				-0.1
3,922,404	-				-0.1
3,922,404	-				+0.9
3,922,404	-				-0.0
3,922,404	-				-0.0
3,922,404	-				+2.0
3,922,404	-				-2.9