Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3992

Experiment: Gentamicin 0.015 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.015 mg/ml
4,104,513	+		Ga0059261_3990	0.39	+0.3
4,104,513	+		Ga0059261_3990	0.39	-0.2
4,104,514	-		Ga0059261_3990	0.39	+0.5
4,104,514	-		Ga0059261_3990	0.39	-0.3
4,104,514	-		Ga0059261_3990	0.39	-0.3
4,104,514	-		Ga0059261_3990	0.39	+1.4
4,104,578	+		Ga0059261_3990	0.65	-0.4
4,104,578	+		Ga0059261_3990	0.65	+0.8
4,104,578	+		Ga0059261_3990	0.65	-0.2
4,104,578	+		Ga0059261_3990	0.65	-0.3
4,104,579	-				+0.1
4,104,583	+		Ga0059261_3990	0.67	+0.3
4,104,584	-		Ga0059261_3990	0.67	-0.4
4,104,623	-		Ga0059261_3990	0.83	-0.0
4,104,761	+		Ga0059261_3991	0.12	-0.6
4,104,761	+		Ga0059261_3991	0.12	+0.0
4,104,761	+		Ga0059261_3991	0.12	+0.8
4,104,761	+		Ga0059261_3991	0.12	-0.7
4,104,761	+		Ga0059261_3991	0.12	+0.1
4,104,761	+		Ga0059261_3991	0.12	+0.0
4,104,762	-		Ga0059261_3991	0.12	+0.6
4,104,762	-		Ga0059261_3991	0.12	+0.1
4,104,762	-		Ga0059261_3991	0.12	-0.3
4,104,762	-		Ga0059261_3991	0.12	-1.0
4,104,762	-		Ga0059261_3991	0.12	+0.4
4,104,762	-		Ga0059261_3991	0.12	+0.4
4,104,855	+		Ga0059261_3991	0.24	+0.3
4,104,855	+		Ga0059261_3991	0.24	-0.2
4,104,855	+		Ga0059261_3991	0.24	+0.1
4,104,855	+		Ga0059261_3991	0.24	-0.1
4,104,855	+		Ga0059261_3991	0.24	+0.5
4,104,855	+		Ga0059261_3991	0.24	+0.2
4,104,856	-		Ga0059261_3991	0.24	-0.2
4,104,856	-		Ga0059261_3991	0.24	-1.3
4,104,856	-		Ga0059261_3991	0.24	+0.3
4,104,856	-		Ga0059261_3991	0.24	-1.7
4,104,893	+		Ga0059261_3991	0.28	+0.3
4,104,893	+		Ga0059261_3991	0.28	+0.5
4,104,893	+		Ga0059261_3991	0.28	-0.4
4,104,894	-		Ga0059261_3991	0.28	+2.6
4,104,894	-		Ga0059261_3991	0.28	+0.2
4,104,894	-		Ga0059261_3991	0.28	-0.9
4,105,026	+		Ga0059261_3991	0.44	-0.0
4,105,027	-		Ga0059261_3991	0.45	-0.2
4,105,377	+		Ga0059261_3991	0.88	-0.2
4,105,377	+		Ga0059261_3991	0.88	+0.8
4,105,377	+		Ga0059261_3991	0.88	+0.5
4,105,377	+		Ga0059261_3991	0.88	-0.3
4,105,377	+		Ga0059261_3991	0.88	+0.2
4,105,377	+		Ga0059261_3991	0.88	+0.7
4,105,377	+		Ga0059261_3991	0.88	+0.1
4,105,378	-		Ga0059261_3991	0.88	+1.3
4,105,378	-		Ga0059261_3991	0.88	-0.2
4,105,378	-		Ga0059261_3991	0.88	-0.5
4,105,378	-		Ga0059261_3991	0.88	-1.2
4,105,378	-		Ga0059261_3991	0.88	+2.5
4,105,378	-		Ga0059261_3991	0.88	-0.5
4,105,378	-		Ga0059261_3991	0.88	+0.4
4,105,378	-		Ga0059261_3991	0.88	+0.5
4,105,413	+				-0.2
4,105,413	+				+0.3
4,105,413	+				+0.9
4,105,414	-				-0.1
4,105,414	-				+0.1
4,105,414	-				+1.0
4,105,414	-				+0.5
4,105,414	-				-1.2
4,105,414	-				+0.6
4,105,612	+		Ga0059261_3992	0.34	-0.0
4,105,613	-		Ga0059261_3992	0.34	+1.5
4,105,690	+		Ga0059261_3992	0.54	-0.6
4,105,763	-		Ga0059261_3992	0.73	+0.6
4,105,978	+				+0.1
4,105,978	+				+1.3
4,105,979	-				-0.3
4,106,062	+				-1.2
4,106,062	+				-0.3
4,106,062	+				-1.1
4,106,062	+				-1.4
4,106,062	+				+0.5
4,106,063	-				+0.5
4,106,063	-				+0.7
4,106,128	+		Ga0059261_3993	0.12	+0.1
4,106,128	+		Ga0059261_3993	0.12	+0.7
4,106,398	+		Ga0059261_3993	0.26	-0.8
4,106,398	+		Ga0059261_3993	0.26	+0.5
4,106,398	+		Ga0059261_3993	0.26	-0.1
4,106,399	-		Ga0059261_3993	0.26	-1.3
4,106,399	-		Ga0059261_3993	0.26	+0.0
4,106,399	-		Ga0059261_3993	0.26	+1.0
4,106,399	-		Ga0059261_3993	0.26	+0.2
4,106,399	-		Ga0059261_3993	0.26	-0.1
4,106,400	+		Ga0059261_3993	0.26	-0.2
4,106,401	-		Ga0059261_3993	0.26	+0.3
4,106,401	-		Ga0059261_3993	0.26	+0.6
4,106,551	+		Ga0059261_3993	0.33	+0.9
4,106,552	-		Ga0059261_3993	0.33	-0.1
4,106,552	-		Ga0059261_3993	0.33	+0.4
4,106,686	+		Ga0059261_3993	0.40	+0.7
4,106,686	+		Ga0059261_3993	0.40	+0.1
4,106,687	-		Ga0059261_3993	0.40	+0.1
4,106,687	-		Ga0059261_3993	0.40	+0.6
4,106,687	-		Ga0059261_3993	0.40	-1.1
4,106,687	-		Ga0059261_3993	0.40	+0.7
4,106,689	+		Ga0059261_3993	0.40	+0.2
4,106,689	+		Ga0059261_3993	0.40	-0.5
4,106,690	-		Ga0059261_3993	0.40	+0.6
4,106,690	-		Ga0059261_3993	0.40	+1.3
4,106,690	-		Ga0059261_3993	0.40	-0.3
4,106,749	+		Ga0059261_3993	0.43	+1.0
4,106,749	+		Ga0059261_3993	0.43	-0.1
4,106,749	+		Ga0059261_3993	0.43	+1.0
4,106,749	+		Ga0059261_3993	0.43	-1.9
4,106,749	+		Ga0059261_3993	0.43	-0.5
4,106,749	+		Ga0059261_3993	0.43	+0.4
4,106,749	+		Ga0059261_3993	0.43	-0.7
4,106,750	-		Ga0059261_3993	0.43	-1.0
4,106,750	-		Ga0059261_3993	0.43	+0.6
4,106,750	-		Ga0059261_3993	0.43	-0.1
4,106,750	-		Ga0059261_3993	0.43	+0.6