Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3482

Experiment: Gentamicin 0.015 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.015 mg/ml
3,608,339	+				-1.2
3,608,339	+				-1.8
3,608,339	+				-0.6
3,608,343	+				-0.4
3,608,343	+				-1.3
3,608,343	+				-1.4
3,608,343	+				-0.8
3,608,343	+				-2.6
3,608,343	+				-1.5
3,608,343	+				-0.0
3,608,343	+				+0.2
3,608,343	+				-0.3
3,608,343	+				-1.4
3,608,343	+				-0.4
3,608,344	-				-0.8
3,608,344	-				-0.7
3,608,344	-				-1.1
3,608,344	-				-1.4
3,608,344	-				-1.3
3,608,344	-				-1.1
3,608,344	-				-0.2
3,608,344	-				-1.4
3,608,344	-				-0.8
3,608,344	-				-0.3
3,608,382	+		Ga0059261_3481	0.13	-1.2
3,608,383	-		Ga0059261_3481	0.13	-1.0
3,608,509	-		Ga0059261_3481	0.25	-0.0
3,608,522	+		Ga0059261_3481	0.27	-0.8
3,608,522	+		Ga0059261_3481	0.27	-0.6
3,608,522	+		Ga0059261_3481	0.27	-1.8
3,608,523	-				+0.4
3,608,523	-		Ga0059261_3481	0.27	-1.3
3,608,523	-		Ga0059261_3481	0.27	-1.0
3,608,523	-		Ga0059261_3481	0.27	-0.5
3,608,764	+		Ga0059261_3481	0.51	-0.2
3,608,764	+		Ga0059261_3481	0.51	-1.1
3,608,764	+		Ga0059261_3481	0.51	-0.5
3,608,764	+		Ga0059261_3481	0.51	-1.4
3,608,764	+		Ga0059261_3481	0.51	-1.2
3,608,764	+		Ga0059261_3481	0.51	-1.1
3,608,764	+		Ga0059261_3481	0.51	-1.0
3,608,764	+		Ga0059261_3481	0.51	-0.2
3,608,764	+		Ga0059261_3481	0.51	+1.8
3,608,764	+		Ga0059261_3481	0.51	-1.2
3,608,765	-		Ga0059261_3481	0.51	-2.4
3,608,765	-		Ga0059261_3481	0.51	-1.6
3,608,765	-		Ga0059261_3481	0.51	+0.3
3,608,765	-		Ga0059261_3481	0.51	-0.2
3,608,802	-		Ga0059261_3481	0.55	+0.3
3,609,470	+		Ga0059261_3482	0.18	+1.5
3,609,470	+		Ga0059261_3482	0.18	-0.1
3,609,470	+		Ga0059261_3482	0.18	+0.3
3,609,470	+		Ga0059261_3482	0.18	+0.6
3,609,471	-		Ga0059261_3482	0.18	+0.1
3,609,479	+		Ga0059261_3482	0.19	+0.3
3,609,479	+		Ga0059261_3482	0.19	-2.0
3,609,479	+		Ga0059261_3482	0.19	-1.3
3,609,479	+		Ga0059261_3482	0.19	-0.2
3,609,479	+		Ga0059261_3482	0.19	-0.9
3,609,479	+		Ga0059261_3482	0.19	+0.1
3,609,480	-		Ga0059261_3482	0.19	-1.5
3,609,480	-		Ga0059261_3482	0.19	-0.1
3,609,480	-		Ga0059261_3482	0.19	+0.4
3,609,480	-		Ga0059261_3482	0.19	-0.6
3,609,480	-		Ga0059261_3482	0.19	+0.2
3,609,480	-		Ga0059261_3482	0.19	-0.3
3,609,480	-		Ga0059261_3482	0.19	-0.2
3,609,480	-		Ga0059261_3482	0.19	-0.6
3,609,480	-		Ga0059261_3482	0.19	+0.4
3,609,480	-		Ga0059261_3482	0.19	-0.7
3,609,524	+		Ga0059261_3482	0.25	-0.6
3,609,524	+		Ga0059261_3482	0.25	-0.5
3,609,551	+		Ga0059261_3482	0.29	+0.3
3,609,551	+		Ga0059261_3482	0.29	+0.8
3,609,552	-		Ga0059261_3482	0.29	-0.7
3,609,770	+		Ga0059261_3482	0.59	-0.6
3,609,770	+		Ga0059261_3482	0.59	-0.8
3,609,770	+		Ga0059261_3482	0.59	+0.6
3,609,770	+		Ga0059261_3482	0.59	-0.2
3,609,770	+		Ga0059261_3482	0.59	+1.0
3,609,771	-		Ga0059261_3482	0.59	+1.1
3,609,771	-		Ga0059261_3482	0.59	+3.1
3,609,771	-		Ga0059261_3482	0.59	+0.6
3,609,788	+		Ga0059261_3482	0.61	+0.3
3,609,789	-		Ga0059261_3482	0.61	+0.7
3,609,789	-		Ga0059261_3482	0.61	+0.6
3,609,950	+		Ga0059261_3482	0.83	-0.5
3,610,049	+				-0.2
3,610,049	+				+0.2
3,610,049	+				+0.4
3,610,050	-				-0.1
3,610,050	-				+0.0
3,610,050	-				-0.2
3,610,050	-				+0.2
3,610,147	-		Ga0059261_3483	0.13	+0.3
3,610,156	+		Ga0059261_3483	0.15	+1.0
3,610,157	-		Ga0059261_3483	0.15	+0.1
3,610,157	-		Ga0059261_3483	0.15	+0.2
3,610,157	-		Ga0059261_3483	0.15	+0.0
3,610,157	-		Ga0059261_3483	0.15	-0.3
3,610,157	-		Ga0059261_3483	0.15	+0.5
3,610,157	-		Ga0059261_3483	0.15	-0.0
3,610,210	+		Ga0059261_3483	0.24	+0.1
3,610,210	+		Ga0059261_3483	0.24	-0.6
3,610,211	-		Ga0059261_3483	0.24	-0.1
3,610,357	+		Ga0059261_3483	0.48	+3.6
3,610,358	-		Ga0059261_3483	0.49	-0.1
3,610,358	-		Ga0059261_3483	0.49	+0.8
3,610,640	+				-2.6