Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3350

Experiment: Gentamicin 0.015 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.015 mg/ml
3,479,727	+		Ga0059261_3349	0.51	-0.6
3,479,727	+		Ga0059261_3349	0.51	-0.3
3,479,727	+		Ga0059261_3349	0.51	+0.4
3,479,727	+		Ga0059261_3349	0.51	+0.7
3,479,727	+		Ga0059261_3349	0.51	+1.4
3,479,727	+		Ga0059261_3349	0.51	+0.6
3,479,728	-		Ga0059261_3349	0.51	-0.7
3,479,728	-		Ga0059261_3349	0.51	+0.3
3,479,728	-		Ga0059261_3349	0.51	-0.4
3,479,728	-		Ga0059261_3349	0.51	+0.3
3,479,728	-		Ga0059261_3349	0.51	-1.3
3,479,728	-		Ga0059261_3349	0.51	-0.1
3,479,800	+		Ga0059261_3349	0.55	-0.1
3,479,800	+		Ga0059261_3349	0.55	+0.0
3,479,800	+		Ga0059261_3349	0.55	-0.8
3,479,801	-		Ga0059261_3349	0.55	-0.0
3,479,859	+		Ga0059261_3349	0.58	+0.3
3,479,859	+				-0.8
3,479,859	+		Ga0059261_3349	0.58	-0.4
3,479,860	-		Ga0059261_3349	0.58	+0.6
3,479,860	-		Ga0059261_3349	0.58	-0.3
3,479,860	-		Ga0059261_3349	0.58	-0.6
3,479,860	-		Ga0059261_3349	0.58	+0.8
3,479,860	-		Ga0059261_3349	0.58	-0.0
3,479,860	-		Ga0059261_3349	0.58	-0.2
3,479,860	-		Ga0059261_3349	0.58	+0.4
3,479,860	-		Ga0059261_3349	0.58	-0.8
3,479,860	-		Ga0059261_3349	0.58	-0.2
3,479,907	+		Ga0059261_3349	0.61	+0.4
3,479,908	-		Ga0059261_3349	0.61	-0.0
3,479,908	-		Ga0059261_3349	0.61	-0.9
3,479,908	-		Ga0059261_3349	0.61	-0.1
3,479,967	+		Ga0059261_3349	0.64	-0.9
3,479,967	+		Ga0059261_3349	0.64	+1.8
3,480,254	-		Ga0059261_3349	0.81	-1.1
3,480,254	-		Ga0059261_3349	0.81	+0.0
3,480,255	+		Ga0059261_3349	0.81	+0.3
3,480,255	+		Ga0059261_3349	0.81	-0.4
3,480,255	+		Ga0059261_3349	0.81	-0.2
3,480,256	-		Ga0059261_3349	0.81	-0.6
3,480,256	-		Ga0059261_3349	0.81	-0.1
3,480,256	-		Ga0059261_3349	0.81	-0.0
3,480,285	+		Ga0059261_3349	0.83	+0.0
3,480,285	+		Ga0059261_3349	0.83	+0.6
3,480,576	-				+0.2
3,480,742	+				-0.2
3,480,742	+				+0.4
3,480,742	+				-0.3
3,480,742	+				+0.9
3,480,742	+				-0.5
3,480,742	+				-0.2
3,480,743	-				-0.8
3,480,807	-				-0.6
3,480,807	-				-0.0
3,480,807	-				-0.4
3,480,807	-				-1.2
3,480,807	-				+0.1
3,480,830	+				-0.1
3,480,830	+				-1.1
3,480,831	-				-2.0
3,480,994	+		Ga0059261_3350	0.21	+2.4
3,480,995	-		Ga0059261_3350	0.21	-0.4
3,480,995	-		Ga0059261_3350	0.21	+0.1
3,480,995	-		Ga0059261_3350	0.21	+0.6
3,481,057	+		Ga0059261_3350	0.26	+0.2
3,481,057	+		Ga0059261_3350	0.26	+0.0
3,481,057	+		Ga0059261_3350	0.26	+0.1
3,481,057	+		Ga0059261_3350	0.26	+0.4
3,481,057	+		Ga0059261_3350	0.26	+0.2
3,481,057	+		Ga0059261_3350	0.26	+0.5
3,481,057	+		Ga0059261_3350	0.26	+0.8
3,481,057	+		Ga0059261_3350	0.26	+0.8
3,481,057	+		Ga0059261_3350	0.26	+0.4
3,481,058	-		Ga0059261_3350	0.26	+0.2
3,481,058	-		Ga0059261_3350	0.26	+1.2
3,481,058	-		Ga0059261_3350	0.26	+0.2
3,481,058	-		Ga0059261_3350	0.26	+0.3
3,481,058	-		Ga0059261_3350	0.26	+0.8
3,481,058	-		Ga0059261_3350	0.26	+0.7
3,481,058	-		Ga0059261_3350	0.26	+0.2
3,481,058	-		Ga0059261_3350	0.26	-0.0
3,481,058	-		Ga0059261_3350	0.26	+0.2
3,481,123	+		Ga0059261_3350	0.31	-0.0
3,481,686	-		Ga0059261_3350	0.74	+0.5
3,481,686	-		Ga0059261_3350	0.74	+0.0
3,481,723	+		Ga0059261_3350	0.77	-1.6
3,481,723	+		Ga0059261_3350	0.77	+0.8
3,481,723	+		Ga0059261_3350	0.77	-0.4
3,481,723	+		Ga0059261_3350	0.77	-0.2
3,481,723	+		Ga0059261_3350	0.77	+0.8
3,481,723	+		Ga0059261_3350	0.77	+0.6
3,481,723	+		Ga0059261_3350	0.77	-0.7
3,481,723	+		Ga0059261_3350	0.77	+0.4
3,481,723	+		Ga0059261_3350	0.77	+0.4
3,481,723	+		Ga0059261_3350	0.77	+1.8
3,481,723	+		Ga0059261_3350	0.77	+0.0
3,481,723	+		Ga0059261_3350	0.77	+0.9
3,481,723	+		Ga0059261_3350	0.77	-0.5
3,481,724	-		Ga0059261_3350	0.77	+0.6
3,481,724	-		Ga0059261_3350	0.77	+0.8
3,481,724	-		Ga0059261_3350	0.77	-0.1
3,481,724	-		Ga0059261_3350	0.77	-0.2
3,481,724	-		Ga0059261_3350	0.77	+0.4
3,481,724	-		Ga0059261_3350	0.77	-0.7
3,481,724	-		Ga0059261_3350	0.77	+0.1
3,481,724	-		Ga0059261_3350	0.77	+0.3
3,481,724	-		Ga0059261_3350	0.77	+0.4
3,481,724	-		Ga0059261_3350	0.77	+0.6
3,481,724	-		Ga0059261_3350	0.77	+0.1
3,481,724	-		Ga0059261_3350	0.77	-0.8
3,481,724	-		Ga0059261_3350	0.77	+0.8
3,482,109	+				+0.8
3,482,109	+				+0.1
3,482,109	+				-0.4
3,482,109	+				-0.5
3,482,109	+				+1.1
3,482,110	-				+0.2
3,482,110	-				-0.5
3,482,110	-				-0.2
3,482,110	-				+0.1
3,482,110	-				+0.2
3,482,110	-				-0.2
3,482,182	-				+0.5
3,482,264	+				-1.6
3,482,264	+				+0.2
3,482,264	+				+0.4
3,482,264	+				+0.1
3,482,265	-				-0.7
3,482,265	-				-0.4
3,482,265	-				-0.3
3,482,265	-				-0.3
3,482,265	-				+0.2
3,482,265	-				+1.1
3,482,292	+				+0.4
3,482,293	-				-0.1
3,482,388	-		Ga0059261_3351	0.14	-0.5
3,482,388	-		Ga0059261_3351	0.14	+0.6
3,482,388	-		Ga0059261_3351	0.14	+1.0
3,482,388	-		Ga0059261_3351	0.14	-0.9
3,482,388	-		Ga0059261_3351	0.14	+0.1
3,482,388	-		Ga0059261_3351	0.14	-0.5
3,482,442	+		Ga0059261_3351	0.19	-0.5
3,482,461	-		Ga0059261_3351	0.20	-0.4
3,482,461	-		Ga0059261_3351	0.20	-0.6
3,482,591	+		Ga0059261_3351	0.31	+0.4
3,482,591	+		Ga0059261_3351	0.31	-0.4
3,482,591	+		Ga0059261_3351	0.31	+0.1
3,482,591	+		Ga0059261_3351	0.31	+0.6
3,482,591	+		Ga0059261_3351	0.31	-0.7
3,482,592	-		Ga0059261_3351	0.31	-0.8
3,482,618	+		Ga0059261_3351	0.33	-0.0
3,482,618	+		Ga0059261_3351	0.33	+0.4
3,482,618	+		Ga0059261_3351	0.33	+0.0
3,482,619	-		Ga0059261_3351	0.33	-0.1
3,482,619	-		Ga0059261_3351	0.33	+0.8
3,482,619	-		Ga0059261_3351	0.33	+0.0
3,482,619	-		Ga0059261_3351	0.33	+0.8
3,482,996	+				-0.8
3,482,996	+		Ga0059261_3351	0.64	+0.2
3,482,996	+		Ga0059261_3351	0.64	-0.6
3,482,996	+		Ga0059261_3351	0.64	+0.5
3,482,997	-		Ga0059261_3351	0.64	+0.2
3,482,997	-		Ga0059261_3351	0.64	+0.3
3,482,997	-		Ga0059261_3351	0.64	+0.5
3,483,000	+		Ga0059261_3351	0.65	+0.8
3,483,000	+		Ga0059261_3351	0.65	+0.8
3,483,000	+		Ga0059261_3351	0.65	-0.3
3,483,000	+		Ga0059261_3351	0.65	-0.4
3,483,000	+		Ga0059261_3351	0.65	-0.2
3,483,000	+		Ga0059261_3351	0.65	+1.0
3,483,000	+				+0.8
3,483,000	+		Ga0059261_3351	0.65	-0.1
3,483,001	-		Ga0059261_3351	0.65	+0.1
3,483,001	-		Ga0059261_3351	0.65	-0.8
3,483,001	-		Ga0059261_3351	0.65	+0.3
3,483,001	-		Ga0059261_3351	0.65	+0.4
3,483,001	-		Ga0059261_3351	0.65	-0.9
3,483,001	-		Ga0059261_3351	0.65	+0.4
3,483,001	-		Ga0059261_3351	0.65	-0.0