Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2987

Experiment: Gentamicin 0.015 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.015 mg/ml
3,107,400	-		Ga0059261_2985	0.59	-0.7
3,107,400	-		Ga0059261_2985	0.59	-0.2
3,107,400	-		Ga0059261_2985	0.59	+1.0
3,107,400	-		Ga0059261_2985	0.59	+0.7
3,107,400	-		Ga0059261_2985	0.59	-0.6
3,107,400	-		Ga0059261_2985	0.59	+0.2
3,107,400	-		Ga0059261_2985	0.59	+0.1
3,107,400	-		Ga0059261_2985	0.59	+0.6
3,107,400	-		Ga0059261_2985	0.59	-0.8
3,107,400	-		Ga0059261_2985	0.59	+0.6
3,107,400	-		Ga0059261_2985	0.59	+0.4
3,107,461	+		Ga0059261_2985	0.65	-0.1
3,107,926	+		Ga0059261_2986	0.18	+0.4
3,107,926	+		Ga0059261_2986	0.18	+0.7
3,107,927	-		Ga0059261_2986	0.18	-0.3
3,107,930	+		Ga0059261_2986	0.18	+1.0
3,108,204	-		Ga0059261_2986	0.67	+0.6
3,108,209	+		Ga0059261_2986	0.68	+0.0
3,108,209	+		Ga0059261_2986	0.68	-0.2
3,108,209	+		Ga0059261_2986	0.68	-0.6
3,108,209	+		Ga0059261_2986	0.68	+0.1
3,108,209	+		Ga0059261_2986	0.68	+0.4
3,108,209	+		Ga0059261_2986	0.68	-0.1
3,108,209	+		Ga0059261_2986	0.68	-0.1
3,108,209	+		Ga0059261_2986	0.68	+0.6
3,108,209	+		Ga0059261_2986	0.68	+0.1
3,108,209	+		Ga0059261_2986	0.68	-0.1
3,108,209	+		Ga0059261_2986	0.68	+0.4
3,108,209	+		Ga0059261_2986	0.68	-0.8
3,108,209	+		Ga0059261_2986	0.68	-0.5
3,108,209	+		Ga0059261_2986	0.68	-0.3
3,108,209	+		Ga0059261_2986	0.68	-0.2
3,108,209	+		Ga0059261_2986	0.68	+0.3
3,108,209	+		Ga0059261_2986	0.68	-0.2
3,108,209	+		Ga0059261_2986	0.68	-0.4
3,108,209	+		Ga0059261_2986	0.68	+0.2
3,108,209	+		Ga0059261_2986	0.68	+0.2
3,108,209	+		Ga0059261_2986	0.68	+1.0
3,108,210	-		Ga0059261_2986	0.68	-0.1
3,108,210	-		Ga0059261_2986	0.68	+0.8
3,108,210	-				+0.8
3,108,210	-		Ga0059261_2986	0.68	-0.2
3,108,210	-		Ga0059261_2986	0.68	-0.7
3,108,210	-		Ga0059261_2986	0.68	+0.0
3,108,210	-		Ga0059261_2986	0.68	-0.3
3,108,210	-		Ga0059261_2986	0.68	+0.2
3,108,210	-		Ga0059261_2986	0.68	+0.4
3,108,210	-		Ga0059261_2986	0.68	-0.2
3,108,210	-		Ga0059261_2986	0.68	-0.3
3,108,210	-		Ga0059261_2986	0.68	-0.7
3,108,210	-		Ga0059261_2986	0.68	+1.8
3,108,210	-		Ga0059261_2986	0.68	+0.2
3,108,210	-		Ga0059261_2986	0.68	-0.5
3,108,210	-		Ga0059261_2986	0.68	-0.3
3,108,210	-		Ga0059261_2986	0.68	+1.1
3,108,210	-		Ga0059261_2986	0.68	+0.4
3,108,210	-		Ga0059261_2986	0.68	+0.3
3,108,210	-		Ga0059261_2986	0.68	-0.1
3,108,210	-		Ga0059261_2986	0.68	+0.1
3,108,210	-		Ga0059261_2986	0.68	-0.6
3,108,210	-		Ga0059261_2986	0.68	+0.6
3,108,210	-		Ga0059261_2986	0.68	+0.3
3,108,210	-		Ga0059261_2986	0.68	+0.0
3,108,335	+				+0.0
3,108,336	-				-0.7
3,108,336	-				+0.2
3,108,647	-		Ga0059261_2987	0.39	+0.4
3,108,917	-		Ga0059261_2987	0.80	+0.1
3,108,983	+				+0.8
3,108,983	+				-0.1
3,108,983	+				+0.3
3,108,983	+				-0.1
3,108,983	+				-0.7
3,108,983	+				-0.1
3,108,984	-				-0.2
3,108,984	-				-1.5
3,108,984	-				-0.2
3,108,984	-				-0.9
3,108,984	-				-0.1
3,108,988	+				+0.1
3,108,988	+				-1.5
3,108,988	+				+0.2
3,108,988	+				-0.1
3,108,988	+				+0.4
3,108,988	+				+0.6
3,108,989	-				+0.4
3,108,989	-				-1.2
3,108,989	-				-0.0
3,108,989	-				-0.1
3,108,989	-				-0.6
3,108,989	-				+0.2
3,108,989	-				+0.2
3,109,038	+				+0.1
3,109,059	+				-0.6
3,109,059	+				-1.2
3,109,059	+				+0.0
3,109,060	-				+0.2
3,109,060	-				-0.2
3,109,060	-				+0.7
3,109,225	-		Ga0059261_2988	0.18	+0.2
3,109,279	+		Ga0059261_2988	0.27	+0.9
3,109,280	-		Ga0059261_2988	0.27	+0.0
3,109,334	+		Ga0059261_2988	0.35	+0.5
3,109,335	-		Ga0059261_2988	0.35	-0.0
3,109,343	+		Ga0059261_2988	0.36	-0.2
3,109,376	+		Ga0059261_2988	0.41	-0.5
3,109,376	+		Ga0059261_2988	0.41	-0.6
3,109,376	+		Ga0059261_2988	0.41	-0.3
3,109,377	-		Ga0059261_2988	0.42	-0.4
3,109,495	+		Ga0059261_2988	0.60	-0.7
3,109,495	+		Ga0059261_2988	0.60	-0.1
3,109,496	-		Ga0059261_2988	0.60	+0.3
3,109,496	-		Ga0059261_2988	0.60	-0.3
3,109,678	+		Ga0059261_2988	0.88	+0.1
3,109,679	-		Ga0059261_2988	0.88	+0.5
3,109,679	-		Ga0059261_2988	0.88	+0.1
3,109,679	-		Ga0059261_2988	0.88	-0.1
3,109,679	-		Ga0059261_2988	0.88	-0.5
3,109,708	-				+0.2
3,109,818	+				-0.1
3,109,818	+				+0.0
3,109,819	-				+0.3
3,109,819	-				+0.8
3,110,036	+		Ga0059261_2989	0.15	-1.0
3,110,037	-		Ga0059261_2989	0.15	-0.1
3,110,037	-		Ga0059261_2989	0.15	+0.3
3,110,037	-		Ga0059261_2989	0.15	-0.6
3,110,037	-		Ga0059261_2989	0.15	+1.8
3,110,037	-		Ga0059261_2989	0.15	-0.8
3,110,037	-		Ga0059261_2989	0.15	-0.6