Experiment: Gentamicin 0.015 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0450 and Ga0059261_0451 are separated by 184 nucleotides Ga0059261_0451 and Ga0059261_0452 are separated by 37 nucleotides Ga0059261_0452 and Ga0059261_0453 are separated by 23 nucleotides
Ga0059261_0450: Ga0059261_0450 - Putative copper export protein, at 435,221 to 436,143
_0450
Ga0059261_0451: Ga0059261_0451 - hypothetical protein, at 436,328 to 436,636
_0451
Ga0059261_0452: Ga0059261_0452 - Predicted membrane protein, at 436,674 to 437,354
_0452
Ga0059261_0453: Ga0059261_0453 - hypothetical protein, at 437,378 to 437,506
_0453
Position (kb) 436
437 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 435.543 kb on + strand, within Ga0059261_0450 at 435.543 kb on + strand, within Ga0059261_0450 at 435.544 kb on - strand, within Ga0059261_0450 at 435.569 kb on + strand, within Ga0059261_0450 at 435.569 kb on + strand, within Ga0059261_0450 at 435.570 kb on - strand, within Ga0059261_0450 at 435.570 kb on - strand, within Ga0059261_0450 at 435.649 kb on + strand, within Ga0059261_0450 at 435.650 kb on - strand, within Ga0059261_0450 at 435.740 kb on + strand, within Ga0059261_0450 at 435.882 kb on + strand, within Ga0059261_0450 at 436.038 kb on - strand, within Ga0059261_0450 at 436.118 kb on + strand at 436.118 kb on + strand at 436.141 kb on + strand at 436.141 kb on + strand at 436.141 kb on + strand at 436.142 kb on - strand at 436.142 kb on - strand at 436.142 kb on - strand at 436.142 kb on - strand at 436.142 kb on - strand at 436.142 kb on - strand at 436.186 kb on + strand at 436.186 kb on + strand at 436.187 kb on - strand at 436.329 kb on + strand at 436.329 kb on + strand at 436.329 kb on + strand at 436.329 kb on + strand at 436.330 kb on - strand at 436.330 kb on - strand at 436.330 kb on - strand at 436.330 kb on - strand at 436.330 kb on - strand at 436.330 kb on - strand at 436.330 kb on - strand at 436.489 kb on + strand, within Ga0059261_0451 at 436.490 kb on - strand, within Ga0059261_0451 at 436.540 kb on + strand, within Ga0059261_0451 at 436.540 kb on + strand, within Ga0059261_0451 at 436.540 kb on + strand, within Ga0059261_0451 at 436.540 kb on + strand, within Ga0059261_0451 at 436.577 kb on - strand, within Ga0059261_0451 at 436.636 kb on + strand at 436.636 kb on + strand at 436.636 kb on + strand at 436.636 kb on + strand at 436.636 kb on + strand at 436.636 kb on + strand at 436.636 kb on + strand at 436.636 kb on + strand at 436.637 kb on - strand at 436.637 kb on - strand at 436.637 kb on - strand at 436.637 kb on - strand at 436.771 kb on + strand, within Ga0059261_0452 at 436.771 kb on + strand, within Ga0059261_0452 at 436.772 kb on - strand, within Ga0059261_0452 at 436.772 kb on - strand, within Ga0059261_0452 at 436.772 kb on - strand, within Ga0059261_0452 at 436.772 kb on - strand, within Ga0059261_0452 at 436.772 kb on - strand, within Ga0059261_0452 at 436.797 kb on - strand, within Ga0059261_0452 at 436.900 kb on + strand, within Ga0059261_0452 at 436.900 kb on + strand, within Ga0059261_0452 at 436.900 kb on + strand, within Ga0059261_0452 at 436.900 kb on + strand, within Ga0059261_0452 at 436.901 kb on - strand, within Ga0059261_0452 at 437.330 kb on + strand at 437.330 kb on + strand at 437.330 kb on + strand at 437.330 kb on + strand at 437.330 kb on + strand at 437.330 kb on + strand at 437.330 kb on + strand at 437.330 kb on + strand at 437.330 kb on + strand at 437.330 kb on + strand at 437.331 kb on - strand at 437.331 kb on - strand at 437.331 kb on - strand at 437.331 kb on - strand at 437.331 kb on - strand at 437.331 kb on - strand at 437.333 kb on - strand at 437.342 kb on + strand at 437.342 kb on + strand at 437.342 kb on + strand at 437.343 kb on - strand at 437.343 kb on - strand at 437.343 kb on - strand at 437.358 kb on + strand at 437.358 kb on + strand at 437.358 kb on + strand at 437.358 kb on + strand at 437.359 kb on - strand at 437.359 kb on - strand at 437.359 kb on - strand at 437.380 kb on - strand at 437.390 kb on - strand at 437.519 kb on + strand at 437.519 kb on + strand at 437.519 kb on + strand at 437.519 kb on + strand at 437.520 kb on - strand at 437.520 kb on - strand at 437.520 kb on - strand at 437.520 kb on - strand at 437.520 kb on - strand at 437.520 kb on - strand at 437.522 kb on + strand at 437.522 kb on + strand at 437.522 kb on + strand at 437.522 kb on + strand at 437.523 kb on - strand at 437.548 kb on - strand at 437.627 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Gentamicin 0.015 mg/ml remove 435,543 + Ga0059261_0450 0.35 -0.5 435,543 + Ga0059261_0450 0.35 -0.4 435,544 - Ga0059261_0450 0.35 -0.1 435,569 + Ga0059261_0450 0.38 -0.9 435,569 + Ga0059261_0450 0.38 -0.4 435,570 - Ga0059261_0450 0.38 -1.5 435,570 - Ga0059261_0450 0.38 +0.4 435,649 + Ga0059261_0450 0.46 +1.7 435,650 - Ga0059261_0450 0.46 -1.1 435,740 + Ga0059261_0450 0.56 -0.6 435,882 + Ga0059261_0450 0.72 +0.3 436,038 - Ga0059261_0450 0.89 +0.8 436,118 + +0.5 436,118 + -0.4 436,141 + +0.6 436,141 + +1.4 436,141 + -1.3 436,142 - -0.7 436,142 - -0.3 436,142 - +0.3 436,142 - +0.5 436,142 - +0.4 436,142 - +0.7 436,186 + -0.0 436,186 + -0.1 436,187 - +0.0 436,329 + -0.3 436,329 + -0.3 436,329 + -0.5 436,329 + +0.1 436,330 - +1.3 436,330 - +0.7 436,330 - +0.1 436,330 - +0.2 436,330 - -0.6 436,330 - -0.7 436,330 - -0.2 436,489 + Ga0059261_0451 0.52 +0.2 436,490 - Ga0059261_0451 0.52 +0.7 436,540 + Ga0059261_0451 0.69 +0.7 436,540 + Ga0059261_0451 0.69 -0.7 436,540 + Ga0059261_0451 0.69 +0.1 436,540 + Ga0059261_0451 0.69 +0.6 436,577 - Ga0059261_0451 0.81 +0.0 436,636 + -0.2 436,636 + -1.1 436,636 + +0.5 436,636 + +0.5 436,636 + -0.6 436,636 + +0.1 436,636 + -0.3 436,636 + +0.5 436,637 - +0.7 436,637 - -0.2 436,637 - -0.3 436,637 - -1.3 436,771 + Ga0059261_0452 0.14 +0.3 436,771 + Ga0059261_0452 0.14 +0.7 436,772 - Ga0059261_0452 0.14 +0.0 436,772 - Ga0059261_0452 0.14 -0.0 436,772 - Ga0059261_0452 0.14 +0.2 436,772 - Ga0059261_0452 0.14 +0.3 436,772 - Ga0059261_0452 0.14 +0.7 436,797 - Ga0059261_0452 0.18 -1.3 436,900 + Ga0059261_0452 0.33 -0.3 436,900 + Ga0059261_0452 0.33 -0.3 436,900 + Ga0059261_0452 0.33 +0.2 436,900 + Ga0059261_0452 0.33 -0.3 436,901 - Ga0059261_0452 0.33 -0.4 437,330 + -0.4 437,330 + -0.3 437,330 + -1.0 437,330 + +0.5 437,330 + -0.4 437,330 + +0.6 437,330 + +0.4 437,330 + +0.5 437,330 + -0.1 437,330 + -1.1 437,331 - -2.4 437,331 - +0.2 437,331 - +0.1 437,331 - -0.6 437,331 - -0.2 437,331 - +0.2 437,333 - -0.1 437,342 + +1.2 437,342 + -0.9 437,342 + -0.2 437,343 - -0.4 437,343 - -3.4 437,343 - -0.2 437,358 + +0.7 437,358 + +0.1 437,358 + -0.9 437,358 + +0.6 437,359 - -0.9 437,359 - -0.2 437,359 - +0.1 437,380 - +0.3 437,390 - -0.2 437,519 + -0.3 437,519 + -0.0 437,519 + +0.7 437,519 + -0.5 437,520 - +0.2 437,520 - +0.1 437,520 - +0.9 437,520 - -0.3 437,520 - -1.1 437,520 - -0.3 437,522 + +0.0 437,522 + -0.5 437,522 + -0.4 437,522 + +1.3 437,523 - -0.4 437,548 - -0.2 437,627 + -0.0
Or see this region's nucleotide sequence