Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03549

Experiment: PYE with Benzalkonium Chloride 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Benzalkonium Chloride 0.0001 mg/ml
3,704,944	+		CCNA_03548	0.49	+1.2
3,704,961	+		CCNA_03548	0.50	+1.2
3,705,013	+		CCNA_03548	0.54	-0.4
3,705,023	+		CCNA_03548	0.54	-1.5
3,705,023	+		CCNA_03548	0.54	-0.4
3,705,023	+		CCNA_03548	0.54	-0.5
3,705,070	-		CCNA_03548	0.58	+0.6
3,705,169	+		CCNA_03548	0.65	-0.1
3,705,199	+		CCNA_03548	0.67	+0.2
3,705,207	-		CCNA_03548	0.68	-0.1
3,705,221	+		CCNA_03548	0.69	-0.8
3,705,290	+		CCNA_03548	0.74	-2.6
3,705,298	+		CCNA_03548	0.74	-0.4
3,705,313	+		CCNA_03548	0.75	-0.6
3,705,331	+		CCNA_03548	0.77	+0.6
3,705,365	+		CCNA_03548	0.79	+0.0
3,705,367	+		CCNA_03548	0.79	-1.9
3,705,407	+		CCNA_03548	0.82	-1.5
3,705,430	+		CCNA_03548	0.84	+2.2
3,705,436	+		CCNA_03548	0.84	-2.3
3,705,484	+		CCNA_03548	0.88	-1.9
3,705,485	-		CCNA_03548	0.88	+1.2
3,705,532	+				-1.3
3,705,534	+				-1.1
3,705,648	+				+2.0
3,705,656	-				+1.2
3,705,687	+				+2.5
3,705,695	-				+0.0
3,705,706	+				+0.8
3,705,748	-				-0.1
3,705,771	-				+0.0
3,705,773	+				-1.6
3,705,773	+				-0.6
3,705,773	+				+0.2
3,705,773	+				-0.7
3,705,773	+				-1.0
3,705,781	-				-0.5
3,705,806	+				+0.6
3,705,808	+				+0.7
3,705,814	-				+0.4
3,705,816	-				+0.2
3,705,816	-				-0.5
3,705,816	-				+0.9
3,705,818	+				-1.8
3,705,833	+				-0.6
3,705,842	+				-1.1
3,705,852	+				-0.1
3,705,860	-				-0.3
3,705,861	-				-0.9
3,705,872	+				-1.9
3,705,944	+				+1.2
3,705,962	-				+2.2
3,706,029	-		CCNA_03549	0.12	-1.1
3,706,092	+		CCNA_03549	0.15	+0.2
3,706,101	-		CCNA_03549	0.15	+0.6
3,706,101	-		CCNA_03549	0.15	-0.1
3,706,101	-		CCNA_03549	0.15	-1.7
3,706,101	-		CCNA_03549	0.15	-1.0
3,706,101	-		CCNA_03549	0.15	+0.2
3,706,132	+		CCNA_03549	0.16	+0.2
3,706,132	+		CCNA_03549	0.16	-1.3
3,706,132	+		CCNA_03549	0.16	+0.4
3,706,140	-		CCNA_03549	0.17	+2.8
3,706,140	-		CCNA_03549	0.17	-1.9
3,706,147	-		CCNA_03549	0.17	+0.6
3,706,153	-		CCNA_03549	0.17	-0.1
3,706,153	-		CCNA_03549	0.17	+0.2
3,706,162	+		CCNA_03549	0.17	-2.1
3,706,162	+		CCNA_03549	0.17	+0.6
3,706,170	-		CCNA_03549	0.18	-0.5
3,706,170	-		CCNA_03549	0.18	-0.8
3,706,170	-		CCNA_03549	0.18	-0.6
3,706,184	+		CCNA_03549	0.18	+0.6
3,706,191	-		CCNA_03549	0.19	-2.5
3,706,211	+		CCNA_03549	0.20	-0.8
3,706,211	+		CCNA_03549	0.20	-0.1
3,706,238	+		CCNA_03549	0.21	-0.8
3,706,238	+		CCNA_03549	0.21	-1.8
3,706,238	+		CCNA_03549	0.21	+0.1
3,706,238	+		CCNA_03549	0.21	-2.8
3,706,238	+		CCNA_03549	0.21	+1.2
3,706,238	+		CCNA_03549	0.21	+0.6
3,706,238	+		CCNA_03549	0.21	+0.4
3,706,238	+		CCNA_03549	0.21	+0.0
3,706,238	+				+2.2
3,706,238	+		CCNA_03549	0.21	-1.6
3,706,238	+		CCNA_03549	0.21	-0.1
3,706,243	+		CCNA_03549	0.21	-2.4
3,706,243	+		CCNA_03549	0.21	-0.6
3,706,243	+		CCNA_03549	0.21	+0.1
3,706,246	-		CCNA_03549	0.21	-0.8
3,706,246	-		CCNA_03549	0.21	+0.6
3,706,246	-		CCNA_03549	0.21	+1.2
3,706,246	-		CCNA_03549	0.21	-1.3
3,706,246	-		CCNA_03549	0.21	-0.1
3,706,246	-		CCNA_03549	0.21	-0.5
3,706,246	-		CCNA_03549	0.21	-0.1
3,706,246	-		CCNA_03549	0.21	+1.2
3,706,246	-		CCNA_03549	0.21	-1.0
3,706,246	-		CCNA_03549	0.21	-0.8
3,706,246	-		CCNA_03549	0.21	+1.2
3,706,246	-		CCNA_03549	0.21	-0.4
3,706,273	+		CCNA_03549	0.22	-0.8
3,706,273	+		CCNA_03549	0.22	-0.1
3,706,290	-		CCNA_03549	0.23	-0.6
3,706,357	-		CCNA_03549	0.26	+2.2
3,706,378	-		CCNA_03549	0.26	-0.1
3,706,403	-		CCNA_03549	0.28	-2.1
3,706,418	+		CCNA_03549	0.28	-0.6
3,706,481	+		CCNA_03549	0.31	+1.2
3,706,502	+		CCNA_03549	0.32	+0.2
3,706,528	+		CCNA_03549	0.33	-0.4
3,706,528	+		CCNA_03549	0.33	+0.2
3,706,536	-		CCNA_03549	0.33	-0.4
3,706,571	-		CCNA_03549	0.34	+0.6
3,706,574	+		CCNA_03549	0.35	-0.4
3,706,574	+		CCNA_03549	0.35	-1.8
3,706,616	-		CCNA_03549	0.36	-1.7
3,706,653	+		CCNA_03549	0.38	+0.3
3,706,668	-		CCNA_03549	0.39	-0.8
3,706,682	+		CCNA_03549	0.39	+1.6
3,706,692	+		CCNA_03549	0.40	-2.6
3,706,692	+		CCNA_03549	0.40	-0.1
3,706,698	+		CCNA_03549	0.40	-0.1
3,706,707	-				+2.2
3,706,744	-		CCNA_03549	0.42	-2.3
3,706,744	-		CCNA_03549	0.42	-2.1
3,706,767	+		CCNA_03549	0.43	-0.9
3,706,798	-		CCNA_03549	0.44	-0.8
3,706,824	-		CCNA_03549	0.45	-2.2
3,706,859	+		CCNA_03549	0.46	+0.6
3,706,859	+		CCNA_03549	0.46	-0.1
3,706,870	+		CCNA_03549	0.47	+0.7
3,706,891	-		CCNA_03549	0.48	-0.6
3,706,900	+		CCNA_03549	0.48	-2.1
3,706,925	+		CCNA_03549	0.49	-0.7
3,706,930	+		CCNA_03549	0.49	-1.0
3,706,938	-		CCNA_03549	0.50	-0.1
3,706,947	-		CCNA_03549	0.50	+0.0
3,706,963	-		CCNA_03549	0.51	+0.2
3,706,965	+		CCNA_03549	0.51	-1.5
3,706,984	-		CCNA_03549	0.52	-2.6
3,706,984	-		CCNA_03549	0.52	-1.5
3,706,984	-		CCNA_03549	0.52	-0.4
3,707,007	-		CCNA_03549	0.53	-0.6
3,707,007	-		CCNA_03549	0.53	+3.5
3,707,093	+		CCNA_03549	0.56	-0.6
3,707,111	+		CCNA_03549	0.57	-1.8
3,707,146	+		CCNA_03549	0.58	-1.3
3,707,147	+		CCNA_03549	0.58	+0.2
3,707,147	+		CCNA_03549	0.58	-1.1
3,707,152	+		CCNA_03549	0.59	-0.1
3,707,160	-		CCNA_03549	0.59	-0.5
3,707,168	+		CCNA_03549	0.59	+0.6
3,707,173	+		CCNA_03549	0.60	-0.8
3,707,176	-		CCNA_03549	0.60	-0.3
3,707,176	-		CCNA_03549	0.60	-0.1
3,707,195	+		CCNA_03549	0.60	+2.2
3,707,249	-		CCNA_03549	0.63	+0.2
3,707,325	-		CCNA_03549	0.66	-2.8
3,707,372	+		CCNA_03549	0.68	+0.6
3,707,380	-		CCNA_03549	0.68	+1.6
3,707,408	+		CCNA_03549	0.69	+0.6
3,707,411	-		CCNA_03549	0.69	-1.7
3,707,416	-		CCNA_03549	0.70	-1.0
3,707,422	-		CCNA_03549	0.70	+0.2
3,707,428	-		CCNA_03549	0.70	+0.9
3,707,428	-		CCNA_03549	0.70	+0.2
3,707,445	+		CCNA_03549	0.71	-1.0
3,707,445	+		CCNA_03549	0.71	+1.2
3,707,449	-		CCNA_03549	0.71	+0.6
3,707,453	-		CCNA_03549	0.71	-1.6
3,707,453	-		CCNA_03549	0.71	-0.7
3,707,453	-		CCNA_03549	0.71	+0.6
3,707,468	+		CCNA_03549	0.72	-1.7
3,707,468	+		CCNA_03549	0.72	-1.5
3,707,545	-		CCNA_03549	0.75	-1.1
3,707,643	-		CCNA_03549	0.79	-0.8
3,707,650	+		CCNA_03549	0.79	-0.4
3,707,658	-		CCNA_03549	0.80	-1.2
3,707,683	-		CCNA_03549	0.81	+1.2
3,707,725	+		CCNA_03549	0.83	-0.4
3,707,726	+		CCNA_03549	0.83	-1.7
3,707,726	+		CCNA_03549	0.83	-0.1
3,707,726	+		CCNA_03549	0.83	-0.1
3,707,726	+		CCNA_03549	0.83	-1.0
3,707,726	+		CCNA_03549	0.83	-0.4
3,707,781	+		CCNA_03549	0.85	+0.5
3,707,840	+		CCNA_03549	0.87	-0.6
3,707,840	+		CCNA_03549	0.87	-0.6
3,707,848	-		CCNA_03549	0.88	-1.6
3,707,974	+				+0.6
3,707,976	+				+0.4
3,708,011	-				+0.6
3,708,020	+				+0.2
3,708,061	+				+0.4
3,708,061	+				-2.0
3,708,066	+				-0.1
3,708,066	+				+2.2
3,708,066	+				+0.0
3,708,066	+				+0.5
3,708,074	-				-0.5
3,708,097	-				-1.3
3,708,099	+				-0.7
3,708,125	-				+0.2
3,708,128	+				-1.1
3,708,135	-				+1.5
3,708,135	-				-1.1
3,708,136	-				-0.1
3,708,382	+				-0.1
3,708,390	-				+2.2
3,708,390	-				+0.6
3,708,390	-				+0.2
3,708,392	+				-0.5
3,708,392	+				+0.8
3,708,430	-				-0.8
3,708,468	+				-1.4
3,708,468	+				-1.4
3,708,484	-				-1.6
3,708,502	+				-0.8
3,708,506	-				-1.4
3,708,510	+				+2.2
3,708,510	-				+2.2
3,708,531	+				-0.0
3,708,537	+				-1.8
3,708,537	+				+1.2
3,708,577	-				+0.4
3,708,580	+				+0.6
3,708,580	+				-1.6
3,708,603	+				-0.4
3,708,604	-				+0.6
3,708,630	-				+2.7
3,708,652	+				+1.8
3,708,652	+				+0.4
3,708,668	+				-0.3
3,708,671	-				-1.4
3,708,671	-				-2.0
3,708,671	-				-0.8
3,708,671	-				-1.5
3,708,755	-				-1.2
3,708,763	+				-0.6
3,708,788	+				-2.1
3,708,788	+				+0.5
3,708,789	+				-1.2
3,708,797	+				-0.4
3,708,797	+				+0.8
3,708,797	+				+0.6
3,708,805	-				+0.2
3,708,805	-				+0.0
3,708,805	-				-1.1
3,708,805	-				+0.6
3,708,848	+				+1.1
3,708,859	+				+1.4
3,708,881	+				+1.1
3,708,881	+				-1.1
3,708,881	+				+1.1
3,708,889	-				-0.6
3,708,903	+				+0.6
3,708,903	+				+1.7
3,708,903	+				+0.3
3,708,903	+				+3.2
3,708,903	+				+0.9
3,708,903	+				+0.1
3,708,903	+				-0.0
3,708,903	+				+0.6
3,708,903	+				+1.1
3,708,911	-				+0.2
3,708,911	-				+0.4
3,708,911	-				+0.7
3,708,911	-				-0.5
3,708,911	-				+0.2
3,708,927	+		CCNA_03552	0.11	+1.0
3,708,927	+		CCNA_03552	0.11	-0.3
3,708,927	+		CCNA_03552	0.11	+0.2
3,708,927	+		CCNA_03552	0.11	+0.7
3,708,935	-		CCNA_03552	0.11	-0.3
3,708,935	-		CCNA_03552	0.11	+0.2
3,708,935	-		CCNA_03552	0.11	-2.3
3,708,935	-		CCNA_03552	0.11	-0.9
3,709,003	+		CCNA_03552	0.17	+1.0
3,709,013	+		CCNA_03552	0.18	+1.2
3,709,013	+		CCNA_03552	0.18	+0.9
3,709,047	-		CCNA_03552	0.21	+0.2
3,709,049	-		CCNA_03552	0.21	-0.6
3,709,083	-		CCNA_03552	0.24	-0.8
3,709,140	-		CCNA_03552	0.29	+1.2