Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03255

Experiment: PYE with Benzalkonium Chloride 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Benzalkonium Chloride 0.0001 mg/ml
3,425,650	+		CCNA_03254	0.38	-0.7
3,425,658	-		CCNA_03254	0.39	+0.2
3,425,718	+		CCNA_03254	0.43	-1.6
3,425,726	-		CCNA_03254	0.44	-1.4
3,425,726	-		CCNA_03254	0.44	-1.6
3,425,742	-		CCNA_03254	0.45	+0.5
3,425,758	+		CCNA_03254	0.46	-1.0
3,425,763	+		CCNA_03254	0.47	-1.0
3,425,763	+		CCNA_03254	0.47	+0.2
3,425,831	+		CCNA_03254	0.52	-1.3
3,425,831	+		CCNA_03254	0.52	-0.5
3,425,839	-		CCNA_03254	0.52	-2.1
3,425,839	-		CCNA_03254	0.52	-1.5
3,425,850	+		CCNA_03254	0.53	-0.4
3,425,901	+		CCNA_03254	0.57	+0.5
3,425,915	-		CCNA_03254	0.58	-0.8
3,425,936	-		CCNA_03254	0.59	+1.5
3,425,941	-		CCNA_03254	0.60	-0.7
3,425,947	+		CCNA_03254	0.60	+0.6
3,425,947	+		CCNA_03254	0.60	-1.0
3,425,947	+		CCNA_03254	0.60	-1.0
3,425,947	+		CCNA_03254	0.60	+1.9
3,425,947	+		CCNA_03254	0.60	+4.5
3,425,949	+		CCNA_03254	0.60	-0.7
3,425,955	-		CCNA_03254	0.61	+0.2
3,425,955	-		CCNA_03254	0.61	+1.5
3,425,955	-		CCNA_03254	0.61	-1.3
3,425,955	-		CCNA_03254	0.61	-1.8
3,425,955	-		CCNA_03254	0.61	+0.7
3,425,955	-		CCNA_03254	0.61	+0.2
3,425,955	-		CCNA_03254	0.61	+0.7
3,425,977	-		CCNA_03254	0.62	-1.3
3,426,013	-		CCNA_03254	0.65	+0.4
3,426,013	-		CCNA_03254	0.65	+1.5
3,426,013	-		CCNA_03254	0.65	-0.5
3,426,027	+		CCNA_03254	0.66	-0.8
3,426,027	+		CCNA_03254	0.66	-0.5
3,426,033	+		CCNA_03254	0.67	+0.2
3,426,035	-		CCNA_03254	0.67	+0.3
3,426,062	+		CCNA_03254	0.69	+0.6
3,426,062	+		CCNA_03254	0.69	+1.1
3,426,074	-		CCNA_03254	0.70	+1.9
3,426,096	-		CCNA_03254	0.71	+0.2
3,426,124	+		CCNA_03254	0.73	-0.7
3,426,127	-		CCNA_03254	0.73	-1.4
3,426,146	-		CCNA_03254	0.75	-0.5
3,426,172	+		CCNA_03254	0.77	+0.3
3,426,178	+		CCNA_03254	0.77	-2.2
3,426,186	-		CCNA_03254	0.78	-0.1
3,426,190	+		CCNA_03254	0.78	-1.1
3,426,239	+		CCNA_03254	0.82	-1.3
3,426,250	+		CCNA_03254	0.83	+0.2
3,426,251	+		CCNA_03254	0.83	-0.0
3,426,262	+		CCNA_03254	0.83	-0.3
3,426,262	+		CCNA_03254	0.83	-0.6
3,426,262	+		CCNA_03254	0.83	+0.5
3,426,265	-		CCNA_03254	0.84	+1.5
3,426,270	-		CCNA_03254	0.84	-0.1
3,426,290	-		CCNA_03254	0.85	+0.5
3,426,303	-		CCNA_03254	0.86	+0.9
3,426,305	+		CCNA_03254	0.87	-1.3
3,426,305	+		CCNA_03254	0.87	+0.5
3,426,313	-		CCNA_03254	0.87	-0.4
3,426,313	-		CCNA_03254	0.87	-0.5
3,426,313	-		CCNA_03254	0.87	-2.0
3,426,365	+				-0.3
3,426,391	-				+0.4
3,426,417	+				+0.5
3,426,433	+				+0.2
3,426,441	-				+3.1
3,426,441	-				+0.5
3,426,443	+				-0.5
3,426,443	+				+0.8
3,426,443	+				-0.2
3,426,451	-				+1.5
3,426,451	-				-0.5
3,426,475	+				-0.2
3,426,483	-				+1.5
3,426,510	-				-0.7
3,426,576	+				+1.5
3,426,584	-				+0.2
3,426,584	-				+2.7
3,426,641	-				+0.2
3,426,648	-				-1.4
3,426,654	+		CCNA_03255	0.11	+0.5
3,426,659	+		CCNA_03255	0.12	-1.2
3,426,678	-		CCNA_03255	0.16	-0.0
3,426,727	+		CCNA_03255	0.27	-0.7
3,426,727	+		CCNA_03255	0.27	+1.5
3,426,727	+		CCNA_03255	0.27	+1.5
3,426,735	-		CCNA_03255	0.29	-1.6
3,426,735	-		CCNA_03255	0.29	-1.1
3,426,779	+		CCNA_03255	0.38	-1.0
3,426,779	+		CCNA_03255	0.38	-0.7
3,426,779	+		CCNA_03255	0.38	-0.1
3,426,787	-		CCNA_03255	0.40	-0.7
3,426,787	-		CCNA_03255	0.40	-0.1
3,426,787	-		CCNA_03255	0.40	-0.8
3,426,787	-		CCNA_03255	0.40	-2.4
3,426,787	-		CCNA_03255	0.40	-0.1
3,426,853	+		CCNA_03255	0.55	+0.2
3,426,861	-		CCNA_03255	0.57	-1.1
3,426,862	-		CCNA_03255	0.57	-1.1
3,426,881	-		CCNA_03255	0.61	-0.7
3,426,881	-		CCNA_03255	0.61	+0.9
3,426,881	-		CCNA_03255	0.61	+0.5
3,426,908	-		CCNA_03255	0.67	-0.1
3,426,934	-		CCNA_03255	0.73	+0.5
3,427,004	+		CCNA_03255	0.89	+2.5
3,427,022	+				+0.2
3,427,022	+				+0.5
3,427,022	+				-0.1
3,427,022	+				+1.5
3,427,030	-				-0.1
3,427,030	-				-1.6
3,427,068	-				+0.9
3,427,153	-				-0.3
3,427,451	-		CCNA_03256	0.25	-1.1
3,427,532	-		CCNA_03256	0.33	+0.9
3,427,612	+		CCNA_03256	0.40	+2.5
3,427,660	+		CCNA_03256	0.44	-0.3