Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03189

Experiment: PYE with Benzalkonium Chloride 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Benzalkonium Chloride 0.0001 mg/ml
3,348,982	-		CCNA_03188	0.15	-1.2
3,348,982	-		CCNA_03188	0.15	+0.2
3,348,991	+		CCNA_03188	0.16	+1.0
3,348,991	+		CCNA_03188	0.16	+2.5
3,348,991	+		CCNA_03188	0.16	-0.3
3,348,999	-		CCNA_03188	0.16	+0.5
3,348,999	-		CCNA_03188	0.16	-2.0
3,349,041	+		CCNA_03188	0.20	-1.2
3,349,095	+		CCNA_03188	0.25	-1.2
3,349,095	+		CCNA_03188	0.25	+1.5
3,349,120	-		CCNA_03188	0.27	+0.0
3,349,125	-		CCNA_03188	0.27	-2.1
3,349,150	+		CCNA_03188	0.29	-0.6
3,349,158	-		CCNA_03188	0.30	-0.8
3,349,158	-		CCNA_03188	0.30	-1.6
3,349,160	+		CCNA_03188	0.30	+1.6
3,349,164	-		CCNA_03188	0.31	+1.0
3,349,230	-		CCNA_03188	0.36	-0.3
3,349,281	+		CCNA_03188	0.41	+1.5
3,349,284	-		CCNA_03188	0.41	-0.0
3,349,289	+		CCNA_03188	0.42	-0.5
3,349,289	-		CCNA_03188	0.42	-0.5
3,349,289	-		CCNA_03188	0.42	+0.5
3,349,325	-		CCNA_03188	0.45	+0.7
3,349,327	+		CCNA_03188	0.45	+1.0
3,349,358	+		CCNA_03188	0.48	-0.5
3,349,358	+		CCNA_03188	0.48	+0.2
3,349,366	-		CCNA_03188	0.48	-0.9
3,349,374	+		CCNA_03188	0.49	+0.2
3,349,378	-		CCNA_03188	0.49	+0.2
3,349,382	-		CCNA_03188	0.50	+1.0
3,349,395	+		CCNA_03188	0.51	-1.2
3,349,410	-		CCNA_03188	0.52	+0.4
3,349,430	-		CCNA_03188	0.54	-1.6
3,349,435	-		CCNA_03188	0.54	-0.6
3,349,453	+		CCNA_03188	0.56	+1.1
3,349,484	+		CCNA_03188	0.59	+1.0
3,349,489	+		CCNA_03188	0.59	-0.3
3,349,489	+		CCNA_03188	0.59	-0.3
3,349,576	+		CCNA_03188	0.67	+1.0
3,349,607	-		CCNA_03188	0.70	-1.6
3,349,625	-		CCNA_03188	0.71	-0.6
3,349,633	-		CCNA_03188	0.72	+0.2
3,349,636	+		CCNA_03188	0.72	-0.6
3,349,673	+		CCNA_03188	0.75	+0.5
3,349,729	-		CCNA_03188	0.80	+0.2
3,349,742	-		CCNA_03188	0.81	-0.9
3,349,814	-		CCNA_03188	0.88	+0.8
3,349,816	+		CCNA_03188	0.88	-0.0
3,349,816	+		CCNA_03188	0.88	-0.7
3,349,824	-		CCNA_03188	0.89	-1.6
3,349,843	+				+0.5
3,349,850	-				-0.3
3,349,888	-				+0.3
3,349,890	-				+1.2
3,349,904	+				-0.0
3,349,905	-				-0.9
3,349,947	+				-0.5
3,349,955	-				+0.4
3,350,068	+		CCNA_03189	0.22	+0.5
3,350,076	-		CCNA_03189	0.24	-1.9
3,350,090	+		CCNA_03189	0.28	+0.2
3,350,090	+		CCNA_03189	0.28	-1.4
3,350,102	-		CCNA_03189	0.31	+1.0
3,350,125	-		CCNA_03189	0.36	-0.8
3,350,136	-		CCNA_03189	0.39	+0.2
3,350,141	-		CCNA_03189	0.40	-0.6
3,350,177	+		CCNA_03189	0.49	-1.3
3,350,214	-		CCNA_03189	0.58	-0.0
3,350,218	+		CCNA_03189	0.59	+2.5
3,350,218	+		CCNA_03189	0.59	-0.5
3,350,218	+		CCNA_03189	0.59	-0.3
3,350,218	+		CCNA_03189	0.59	-1.2
3,350,218	+		CCNA_03189	0.59	+2.1
3,350,218	+		CCNA_03189	0.59	-0.6
3,350,218	+		CCNA_03189	0.59	+1.0
3,350,226	-		CCNA_03189	0.61	+0.2
3,350,226	-		CCNA_03189	0.61	-1.4
3,350,226	-		CCNA_03189	0.61	+0.2
3,350,226	-		CCNA_03189	0.61	+1.0
3,350,226	-		CCNA_03189	0.61	-0.9
3,350,226	-		CCNA_03189	0.61	+0.5
3,350,226	-		CCNA_03189	0.61	-0.3
3,350,226	-		CCNA_03189	0.61	-1.5
3,350,232	-		CCNA_03189	0.63	-1.0
3,350,244	-		CCNA_03189	0.66	+0.2
3,350,267	+		CCNA_03189	0.71	-0.0
3,350,271	+		CCNA_03189	0.72	-0.0
3,350,305	+		CCNA_03189	0.81	+1.5
3,350,318	+		CCNA_03189	0.84	+0.5
3,350,344	-				-0.6
3,350,350	+				-1.8
3,350,437	+				-0.1
3,350,470	+				+1.0
3,350,481	+				-1.0
3,350,489	-		CCNA_03190	0.11	+2.5
3,350,502	+		CCNA_03190	0.12	+2.5
3,350,507	+		CCNA_03190	0.12	+0.1
3,350,536	-		CCNA_03190	0.15	-0.6
3,350,538	+		CCNA_03190	0.15	-0.8
3,350,546	-		CCNA_03190	0.16	-0.8
3,350,546	-		CCNA_03190	0.16	+1.1
3,350,546	-		CCNA_03190	0.16	+0.2
3,350,546	-		CCNA_03190	0.16	+1.0
3,350,558	+		CCNA_03190	0.17	+0.5
3,350,564	+		CCNA_03190	0.18	-0.3
3,350,567	-		CCNA_03190	0.18	+0.1
3,350,593	-		CCNA_03190	0.21	-0.0
3,350,598	+		CCNA_03190	0.21	-0.1
3,350,606	-		CCNA_03190	0.22	+0.2
3,350,626	-		CCNA_03190	0.24	-1.0
3,350,649	+		CCNA_03190	0.26	+0.3
3,350,654	+		CCNA_03190	0.27	-0.5
3,350,657	-		CCNA_03190	0.27	-0.0
3,350,662	-		CCNA_03190	0.27	+1.2
3,350,686	+		CCNA_03190	0.30	-1.2
3,350,686	+		CCNA_03190	0.30	-0.9
3,350,694	-		CCNA_03190	0.30	-2.3
3,350,694	-		CCNA_03190	0.30	+1.5
3,350,756	-		CCNA_03190	0.36	+0.1
3,350,828	+		CCNA_03190	0.43	-0.5
3,350,842	+		CCNA_03190	0.45	+0.2
3,350,861	+		CCNA_03190	0.47	-2.0
3,350,863	-		CCNA_03190	0.47	-0.3
3,350,882	+		CCNA_03190	0.49	-0.2
3,350,884	-		CCNA_03190	0.49	+2.5
3,350,884	-		CCNA_03190	0.49	-0.5
3,350,888	+		CCNA_03190	0.49	-0.0
3,350,888	+		CCNA_03190	0.49	+0.3
3,350,896	-		CCNA_03190	0.50	-0.4
3,350,896	-		CCNA_03190	0.50	+2.5
3,350,896	-		CCNA_03190	0.50	-1.6
3,350,896	-		CCNA_03190	0.50	+3.0
3,350,896	-		CCNA_03190	0.50	-0.4
3,350,896	-		CCNA_03190	0.50	+2.5
3,350,909	-		CCNA_03190	0.51	-0.0
3,350,909	-		CCNA_03190	0.51	-0.0
3,350,909	-		CCNA_03190	0.51	-2.2
3,350,909	-		CCNA_03190	0.51	-0.8
3,350,941	+		CCNA_03190	0.54	+0.7
3,350,969	-		CCNA_03190	0.57	+0.2
3,350,978	-		CCNA_03190	0.58	-0.9
3,350,984	+		CCNA_03190	0.58	-1.5
3,351,035	+		CCNA_03190	0.63	+0.0
3,351,040	+		CCNA_03190	0.64	-0.0
3,351,043	-		CCNA_03190	0.64	+1.5
3,351,115	-		CCNA_03190	0.71	+1.5
3,351,115	-		CCNA_03190	0.71	+0.2
3,351,118	+		CCNA_03190	0.71	+0.1
3,351,146	-		CCNA_03190	0.74	+1.0
3,351,147	+		CCNA_03190	0.74	-0.6
3,351,158	+		CCNA_03190	0.75	-0.0
3,351,166	-		CCNA_03190	0.76	+4.9
3,351,177	+		CCNA_03190	0.77	+0.0
3,351,177	+		CCNA_03190	0.77	+0.2
3,351,182	+		CCNA_03190	0.78	+0.5
3,351,182	+		CCNA_03190	0.78	+1.3
3,351,185	-		CCNA_03190	0.78	+0.7
3,351,203	-		CCNA_03190	0.80	+3.1
3,351,212	+		CCNA_03190	0.80	+0.7
3,351,217	+		CCNA_03190	0.81	-1.2
3,351,248	-		CCNA_03190	0.84	+0.5
3,351,254	-		CCNA_03190	0.85	-0.6
3,351,341	+				+0.1
3,351,356	+				+0.5