Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03027

Experiment: PYE with Benzalkonium Chloride 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Benzalkonium Chloride 0.0001 mg/ml
3,180,678	-		CCNA_03025	0.79	+0.9
3,180,684	-		CCNA_03025	0.80	-0.1
3,180,752	+				-0.3
3,180,752	+				-0.3
3,180,785	+				+0.7
3,180,793	-				-0.6
3,180,793	-				-1.2
3,180,793	-				-0.3
3,180,793	-				-0.9
3,180,793	-				+0.2
3,180,848	-				-2.4
3,180,967	-		CCNA_03026	0.26	-0.1
3,181,082	-		CCNA_03026	0.43	-0.4
3,181,086	+		CCNA_03026	0.43	-0.5
3,181,092	-		CCNA_03026	0.44	+0.9
3,181,094	-		CCNA_03026	0.45	-1.3
3,181,164	-		CCNA_03026	0.55	+2.5
3,181,195	-		CCNA_03026	0.59	-1.7
3,181,196	+		CCNA_03026	0.59	-3.0
3,181,202	+		CCNA_03026	0.60	-0.1
3,181,203	-		CCNA_03026	0.60	-0.9
3,181,203	-		CCNA_03026	0.60	+0.9
3,181,210	-		CCNA_03026	0.61	+0.5
3,181,218	+		CCNA_03026	0.62	-0.9
3,181,231	-		CCNA_03026	0.64	+0.2
3,181,245	-		CCNA_03026	0.66	+0.2
3,181,274	+		CCNA_03026	0.70	+0.5
3,181,320	-		CCNA_03026	0.77	+0.2
3,181,349	-		CCNA_03026	0.81	+0.9
3,181,388	+		CCNA_03026	0.86	-1.8
3,181,391	+		CCNA_03026	0.87	-0.9
3,181,444	-				-0.2
3,181,452	+				-1.6
3,181,460	-				-0.8
3,181,498	+				-1.7
3,181,506	-				+0.9
3,181,529	-				+0.2
3,181,544	+				+0.4
3,181,550	-				+0.9
3,181,592	+				+1.8
3,181,600	-				+0.9
3,181,635	+				+0.9
3,181,643	-				-2.2
3,181,648	+				-1.2
3,181,648	+				-0.8
3,181,648	+				-0.9
3,181,651	-				-2.1
3,181,667	-				+1.5
3,181,675	+				+0.9
3,181,675	+				+0.9
3,181,756	+				+0.9
3,181,756	+				-1.1
3,181,764	-				-0.7
3,181,770	-				-0.1
3,181,781	+		CCNA_03027	0.10	+0.2
3,181,781	+		CCNA_03027	0.10	-0.1
3,181,781	+		CCNA_03027	0.10	+0.9
3,181,783	+		CCNA_03027	0.10	-0.3
3,181,787	+		CCNA_03027	0.11	-0.9
3,181,787	+		CCNA_03027	0.11	-1.5
3,181,792	+		CCNA_03027	0.11	-0.7
3,181,802	+		CCNA_03027	0.12	+0.2
3,181,816	+		CCNA_03027	0.13	+0.5
3,181,819	-		CCNA_03027	0.13	-0.4
3,181,824	-		CCNA_03027	0.13	-1.5
3,181,838	+		CCNA_03027	0.14	+1.9
3,181,841	-		CCNA_03027	0.15	-1.4
3,181,851	-		CCNA_03027	0.15	+0.1
3,181,851	-		CCNA_03027	0.15	+0.3
3,181,851	-		CCNA_03027	0.15	+0.5
3,181,851	-		CCNA_03027	0.15	-0.3
3,181,851	-		CCNA_03027	0.15	-1.4
3,181,851	-		CCNA_03027	0.15	-0.3
3,181,856	-		CCNA_03027	0.16	-2.7
3,181,866	-		CCNA_03027	0.17	-0.1
3,181,879	+		CCNA_03027	0.17	-1.7
3,181,887	-		CCNA_03027	0.18	-1.8
3,181,925	-		CCNA_03027	0.21	+0.3
3,181,931	+		CCNA_03027	0.21	-2.0
3,181,939	+		CCNA_03027	0.22	+0.7
3,181,981	+		CCNA_03027	0.25	+0.3
3,181,981	+		CCNA_03027	0.25	-0.1
3,181,981	+		CCNA_03027	0.25	-1.6
3,181,981	+		CCNA_03027	0.25	-2.0
3,181,981	+		CCNA_03027	0.25	-1.9
3,181,981	+		CCNA_03027	0.25	-0.1
3,181,981	+		CCNA_03027	0.25	-0.7
3,181,981	+		CCNA_03027	0.25	-2.0
3,181,989	-		CCNA_03027	0.26	+0.9
3,181,989	-		CCNA_03027	0.26	-0.5
3,181,989	-		CCNA_03027	0.26	+0.8
3,181,989	-		CCNA_03027	0.26	+1.5
3,181,989	-		CCNA_03027	0.26	+0.5
3,181,989	-		CCNA_03027	0.26	-0.9
3,181,989	-		CCNA_03027	0.26	-0.1
3,182,012	+		CCNA_03027	0.27	-0.5
3,182,105	+		CCNA_03027	0.34	-1.3
3,182,105	+		CCNA_03027	0.34	-1.7
3,182,106	-		CCNA_03027	0.34	-0.1
3,182,113	-		CCNA_03027	0.35	-0.3
3,182,113	-		CCNA_03027	0.35	-2.3
3,182,147	+		CCNA_03027	0.38	-0.3
3,182,155	-		CCNA_03027	0.38	+0.5
3,182,167	-		CCNA_03027	0.39	+1.5
3,182,174	-		CCNA_03027	0.40	-1.4
3,182,189	-		CCNA_03027	0.41	-1.7
3,182,225	-		CCNA_03027	0.43	-0.1
3,182,272	+		CCNA_03027	0.47	-0.8
3,182,317	+		CCNA_03027	0.50	-0.8
3,182,317	+		CCNA_03027	0.50	-0.0
3,182,317	+		CCNA_03027	0.50	-1.5
3,182,317	+		CCNA_03027	0.50	+0.5
3,182,325	-		CCNA_03027	0.51	+0.2
3,182,325	-		CCNA_03027	0.51	-1.5
3,182,352	+		CCNA_03027	0.53	-0.7
3,182,377	+		CCNA_03027	0.55	-1.7
3,182,382	+		CCNA_03027	0.55	+0.9
3,182,385	-		CCNA_03027	0.55	+0.2
3,182,385	-		CCNA_03027	0.55	-2.7
3,182,393	+		CCNA_03027	0.56	-0.1
3,182,393	+		CCNA_03027	0.56	+3.5
3,182,393	+		CCNA_03027	0.56	-0.3
3,182,393	+		CCNA_03027	0.56	-0.5
3,182,393	+		CCNA_03027	0.56	-0.5
3,182,401	-		CCNA_03027	0.57	+0.2
3,182,401	-		CCNA_03027	0.57	-1.1
3,182,401	-		CCNA_03027	0.57	-2.5
3,182,401	-		CCNA_03027	0.57	-1.4
3,182,401	-		CCNA_03027	0.57	-0.7
3,182,401	-		CCNA_03027	0.57	-1.5
3,182,401	-		CCNA_03027	0.57	-0.4
3,182,401	-		CCNA_03027	0.57	+0.5
3,182,410	+		CCNA_03027	0.57	-0.6
3,182,410	+		CCNA_03027	0.57	+1.9
3,182,418	-		CCNA_03027	0.58	+0.5
3,182,418	-		CCNA_03027	0.58	-0.1
3,182,418	-		CCNA_03027	0.58	-1.1
3,182,418	-		CCNA_03027	0.58	+0.9
3,182,451	-		CCNA_03027	0.60	-1.3
3,182,460	+		CCNA_03027	0.61	-1.5
3,182,509	-		CCNA_03027	0.65	-0.7
3,182,511	-		CCNA_03027	0.65	+0.9
3,182,511	-		CCNA_03027	0.65	-0.7
3,182,512	+		CCNA_03027	0.65	-0.7
3,182,520	-		CCNA_03027	0.65	+1.5
3,182,554	+		CCNA_03027	0.68	-0.3
3,182,564	+		CCNA_03027	0.69	-1.4
3,182,572	-		CCNA_03027	0.69	-1.1
3,182,572	-		CCNA_03027	0.69	+1.2
3,182,582	-		CCNA_03027	0.70	-1.4
3,182,589	+		CCNA_03027	0.71	+2.5
3,182,616	+				+2.5
3,182,658	+		CCNA_03027	0.76	-0.3
3,182,667	-		CCNA_03027	0.76	+1.5
3,182,714	-		CCNA_03027	0.80	-1.9
3,182,738	+		CCNA_03027	0.82	-2.2
3,182,756	+		CCNA_03027	0.83	-1.0
3,182,761	+		CCNA_03027	0.83	-1.4
3,182,813	-		CCNA_03027	0.87	-0.6
3,182,817	+		CCNA_03027	0.88	-1.7
3,182,825	-		CCNA_03027	0.88	+0.2
3,182,867	-				-1.6
3,182,872	+				-1.8
3,182,873	+				-0.1
3,182,881	-				+0.7
3,182,926	+				-1.4
3,182,929	-				-0.5
3,182,941	+				-0.4
3,182,944	-				+0.9
3,182,949	-				-0.9
3,182,949	-				-1.7
3,182,949	-				-0.9
3,182,964	+				-1.1
3,182,972	-				-0.5
3,183,013	+				-0.8
3,183,024	+				-0.2
3,183,032	+				+1.8
3,183,102	+				+0.5
3,183,110	-				+0.8
3,183,110	-				+0.2
3,183,115	-				+1.8
3,183,115	-				+1.3
3,183,141	-				+1.5
3,183,154	+				-0.1
3,183,187	-				+1.9
3,183,196	-		CCNA_03028	0.10	+1.3
3,183,214	+		CCNA_03028	0.12	+1.5
3,183,214	-		CCNA_03028	0.12	+2.1
3,183,232	-		CCNA_03028	0.14	+2.3
3,183,232	-		CCNA_03028	0.14	+1.3
3,183,237	+		CCNA_03028	0.15	+1.5
3,183,313	-		CCNA_03028	0.24	+1.5
3,183,327	+		CCNA_03028	0.25	+1.5
3,183,327	+		CCNA_03028	0.25	+0.5
3,183,327	+		CCNA_03028	0.25	+1.5
3,183,327	+		CCNA_03028	0.25	+0.9
3,183,327	+		CCNA_03028	0.25	-1.9
3,183,335	-		CCNA_03028	0.26	+0.0
3,183,335	-		CCNA_03028	0.26	+0.3
3,183,335	-		CCNA_03028	0.26	-0.9
3,183,335	-		CCNA_03028	0.26	+2.5
3,183,335	-		CCNA_03028	0.26	+0.0
3,183,335	-		CCNA_03028	0.26	+1.1
3,183,335	-		CCNA_03028	0.26	+0.8
3,183,405	+		CCNA_03028	0.35	-0.7
3,183,452	-		CCNA_03028	0.40	+1.7
3,183,454	-		CCNA_03028	0.40	+0.4
3,183,490	-		CCNA_03028	0.45	+1.2
3,183,516	-		CCNA_03028	0.48	+2.5
3,183,516	-		CCNA_03028	0.48	-1.2
3,183,542	-		CCNA_03028	0.51	+1.7
3,183,543	-		CCNA_03028	0.51	+0.9
3,183,547	+		CCNA_03028	0.51	+0.9
3,183,547	+		CCNA_03028	0.51	-0.1
3,183,554	+		CCNA_03028	0.52	+0.2
3,183,555	-		CCNA_03028	0.52	-1.0
3,183,555	-		CCNA_03028	0.52	-1.3
3,183,555	-		CCNA_03028	0.52	-0.7
3,183,583	-		CCNA_03028	0.56	+0.2
3,183,648	+		CCNA_03028	0.63	+0.2
3,183,656	-		CCNA_03028	0.64	+1.8
3,183,657	+		CCNA_03028	0.64	+0.5
3,183,665	-		CCNA_03028	0.65	+0.1
3,183,665	-		CCNA_03028	0.65	+0.5
3,183,665	-		CCNA_03028	0.65	+0.6
3,183,665	-		CCNA_03028	0.65	+0.3
3,183,665	-		CCNA_03028	0.65	+1.1
3,183,674	-		CCNA_03028	0.66	+0.6
3,183,830	-		CCNA_03028	0.85	-1.5
3,183,831	-		CCNA_03028	0.85	+0.7
3,183,838	+		CCNA_03028	0.85	-0.4
3,183,838	-		CCNA_03028	0.85	-0.4
3,183,850	+		CCNA_03028	0.87	-0.3
3,183,850	+		CCNA_03028	0.87	+1.5
3,183,850	+		CCNA_03028	0.87	-0.8
3,183,858	-		CCNA_03028	0.88	+1.5
3,183,858	-		CCNA_03028	0.88	+1.4
3,183,874	-		CCNA_03028	0.90	-0.9
3,183,912	-				+1.5
3,183,912	-				-1.1
3,183,953	-				-0.9
3,183,964	+				-1.2
3,183,967	-				+0.3