Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02944

Experiment: PYE with Benzalkonium Chloride 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Benzalkonium Chloride 0.0001 mg/ml
3,103,114	+		CCNA_02942	0.84	+2.2
3,103,114	+		CCNA_02942	0.84	+1.0
3,103,119	+		CCNA_02942	0.85	+1.5
3,103,124	+		CCNA_02942	0.85	+0.6
3,103,127	-		CCNA_02942	0.85	+0.3
3,103,166	-		CCNA_02942	0.89	-0.7
3,103,182	+		CCNA_02942	0.90	+2.0
3,103,190	-				-0.7
3,103,206	+				+1.7
3,103,226	-				+1.2
3,103,226	-				-1.3
3,103,264	-				+0.4
3,103,311	+				+3.8
3,103,338	-				+0.0
3,103,340	+				+1.0
3,103,340	+				+1.3
3,103,340	+				-0.2
3,103,341	+				+1.9
3,103,341	+				+0.9
3,103,341	+				+2.0
3,103,346	+				+0.1
3,103,388	+				-0.2
3,103,398	+				+0.3
3,103,406	-				+0.7
3,103,440	-				+0.4
3,103,554	+		CCNA_03981	0.30	-0.8
3,103,554	+		CCNA_03981	0.30	+0.3
3,103,554	+		CCNA_03981	0.30	+0.5
3,103,575	+		CCNA_03981	0.42	-1.1
3,103,575	+		CCNA_03981	0.42	-0.2
3,103,583	-		CCNA_03981	0.47	+1.8
3,103,602	+		CCNA_03981	0.59	+1.2
3,103,602	+		CCNA_03981	0.59	+0.6
3,103,622	-		CCNA_03981	0.71	-1.3
3,103,624	+		CCNA_03981	0.72	-2.3
3,103,646	+		CCNA_03981	0.85	-1.6
3,103,691	+				+1.5
3,103,696	+				-0.2
3,103,698	+				+0.4
3,103,722	+				-0.5
3,103,730	-				-1.3
3,103,739	-				-2.1
3,103,750	+		CCNA_03982	0.18	-2.5
3,103,750	+		CCNA_03982	0.18	+0.2
3,103,879	+				+1.7
3,103,896	+				+0.8
3,103,896	+				+0.7
3,103,898	+				+0.8
3,103,960	+				+0.3
3,103,963	-				+1.6
3,103,968	-				-0.5
3,104,010	+				+0.3
3,104,010	+				-0.1
3,104,010	+				+1.4
3,104,010	+				-0.2
3,104,010	+				+1.3
3,104,010	+				+0.9
3,104,010	+				-0.6
3,104,010	+				+0.7
3,104,015	+				-1.7
3,104,018	-				-1.1
3,104,018	-				-0.7
3,104,018	-				-1.1
3,104,018	-				-0.5
3,104,018	-				+0.6
3,104,018	-				-1.8
3,104,018	-				-0.5
3,104,018	-				-0.2
3,104,027	+		CCNA_02944	0.10	+1.6
3,104,027	+		CCNA_02944	0.10	+0.4
3,104,035	-		CCNA_02944	0.11	-1.2
3,104,079	+		CCNA_02944	0.17	-0.1
3,104,126	+		CCNA_02944	0.24	+0.4
3,104,129	-		CCNA_02944	0.24	-0.7
3,104,134	-		CCNA_02944	0.25	+0.1
3,104,146	-		CCNA_02944	0.26	-0.5
3,104,189	-		CCNA_02944	0.32	-1.3
3,104,251	+		CCNA_02944	0.41	+0.5
3,104,319	+		CCNA_02944	0.50	+0.3
3,104,479	-		CCNA_02944	0.71	+3.2
3,104,485	+		CCNA_02944	0.72	+4.4
3,104,568	+		CCNA_02944	0.83	+0.0
3,104,575	+		CCNA_02944	0.84	+0.6
3,104,589	+		CCNA_02944	0.86	+0.9
3,104,630	-				+0.2
3,104,656	+				+0.1
3,104,684	+				+1.5
3,104,684	+				+0.9
3,104,692	-				-1.3
3,104,692	-				+0.6
3,104,765	-				-1.5
3,104,768	+				-0.1
3,104,768	+				+1.6
3,104,768	+				-0.5
3,104,768	+				+0.3
3,104,768	+				+0.2
3,104,768	+				+0.2
3,104,768	+				-0.5
3,104,768	+				+0.1
3,104,768	+				+0.4
3,104,771	-				+0.3
3,104,776	-				+1.0
3,104,776	-				+0.3
3,104,776	-				+1.0
3,104,803	+				+1.2
3,104,809	-				+0.0
3,104,811	+				+0.6
3,104,811	-				+0.8
3,104,817	+				+0.0
3,104,834	+				+0.1
3,104,858	+				-1.4
3,104,917	+		CCNA_02945	0.12	-0.2
3,104,922	-		CCNA_02945	0.12	+0.5
3,104,922	-		CCNA_02945	0.12	+0.4
3,104,927	+		CCNA_02945	0.12	+0.8
3,104,938	+		CCNA_02945	0.13	-0.0
3,104,938	+		CCNA_02945	0.13	+0.5
3,104,940	+		CCNA_02945	0.13	-0.1
3,105,016	+		CCNA_02945	0.17	-0.6
3,105,031	+		CCNA_02945	0.18	-1.0
3,105,080	+		CCNA_02945	0.20	+0.6
3,105,125	+		CCNA_02945	0.22	-0.7
3,105,128	-		CCNA_02945	0.22	-0.4
3,105,146	-		CCNA_02945	0.23	-1.0
3,105,146	-		CCNA_02945	0.23	-0.4
3,105,158	+		CCNA_02945	0.24	+0.3
3,105,219	+		CCNA_02945	0.27	-2.3
3,105,227	-		CCNA_02945	0.28	-0.6
3,105,287	-		CCNA_02945	0.31	-0.6
3,105,297	-		CCNA_02945	0.31	+1.0
3,105,323	-		CCNA_02945	0.32	+2.7
3,105,323	-		CCNA_02945	0.32	+2.3
3,105,325	+		CCNA_02945	0.33	+0.1
3,105,333	-		CCNA_02945	0.33	-0.1
3,105,334	-		CCNA_02945	0.33	+1.3
3,105,344	+		CCNA_02945	0.33	-1.1
3,105,352	-		CCNA_02945	0.34	+1.3
3,105,352	-		CCNA_02945	0.34	+0.9
3,105,352	-		CCNA_02945	0.34	-0.8
3,105,400	-		CCNA_02945	0.36	-0.2
3,105,423	+		CCNA_02945	0.38	-1.9
3,105,423	+		CCNA_02945	0.38	-0.2
3,105,424	-		CCNA_02945	0.38	-1.2
3,105,454	-		CCNA_02945	0.39	-0.4
3,105,454	-		CCNA_02945	0.39	-3.0
3,105,463	-		CCNA_02945	0.40	-1.3
3,105,480	-		CCNA_02945	0.40	-0.6
3,105,485	+		CCNA_02945	0.41	+0.8
3,105,485	+		CCNA_02945	0.41	+2.6
3,105,490	+		CCNA_02945	0.41	-1.3
3,105,490	+		CCNA_02945	0.41	-0.6
3,105,490	+		CCNA_02945	0.41	+0.3
3,105,493	-		CCNA_02945	0.41	-1.8
3,105,505	-		CCNA_02945	0.42	-1.1
3,105,526	-		CCNA_02945	0.43	+1.2
3,105,555	+		CCNA_02945	0.44	+0.0
3,105,555	+		CCNA_02945	0.44	+0.8
3,105,555	+		CCNA_02945	0.44	-0.4
3,105,555	+		CCNA_02945	0.44	-0.4
3,105,555	+		CCNA_02945	0.44	+0.3
3,105,555	+		CCNA_02945	0.44	+0.0
3,105,555	+		CCNA_02945	0.44	+0.0
3,105,555	+		CCNA_02945	0.44	-0.6
3,105,563	-		CCNA_02945	0.45	-0.8
3,105,563	-		CCNA_02945	0.45	+1.0
3,105,595	+		CCNA_02945	0.46	+1.9
3,105,603	-		CCNA_02945	0.47	+0.6
3,105,603	-		CCNA_02945	0.47	-1.6
3,105,616	+		CCNA_02945	0.47	-0.8
3,105,616	+		CCNA_02945	0.47	+0.4
3,105,624	-		CCNA_02945	0.48	+1.0
3,105,624	-		CCNA_02945	0.48	-0.4
3,105,636	+		CCNA_02945	0.48	-0.2
3,105,636	+		CCNA_02945	0.48	+1.0
3,105,636	+		CCNA_02945	0.48	-1.0
3,105,636	+		CCNA_02945	0.48	-0.8
3,105,644	-		CCNA_02945	0.49	-2.0
3,105,644	-		CCNA_02945	0.49	-0.2
3,105,644	-		CCNA_02945	0.49	-0.2
3,105,646	+		CCNA_02945	0.49	+0.6
3,105,654	-		CCNA_02945	0.49	-0.6
3,105,654	-		CCNA_02945	0.49	-0.4
3,105,654	-		CCNA_02945	0.49	+1.0
3,105,662	+		CCNA_02945	0.50	+0.6