Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02879

Experiment: PYE with Benzalkonium Chloride 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Benzalkonium Chloride 0.0001 mg/ml
3,025,793	+				-0.7
3,025,896	+				+1.1
3,025,910	-				+0.8
3,025,960	+		CCNA_02876	0.16	+2.7
3,025,968	-		CCNA_02876	0.18	+0.8
3,025,968	-		CCNA_02876	0.18	+1.7
3,025,968	-		CCNA_02876	0.18	-0.5
3,025,978	-		CCNA_02876	0.20	+2.7
3,025,985	+		CCNA_02876	0.22	+1.5
3,025,985	+		CCNA_02876	0.22	+1.1
3,025,985	+		CCNA_02876	0.22	-1.2
3,025,995	+		CCNA_02876	0.24	+0.7
3,026,002	+		CCNA_02876	0.26	-0.2
3,026,003	-		CCNA_02876	0.26	-0.3
3,026,036	-		CCNA_02876	0.33	-0.3
3,026,082	+		CCNA_02876	0.44	-1.7
3,026,143	+		CCNA_02876	0.58	-0.2
3,026,151	-		CCNA_02876	0.59	+0.3
3,026,152	+		CCNA_02876	0.60	-0.4
3,026,191	-		CCNA_02876	0.68	-0.3
3,026,191	-		CCNA_02876	0.68	+1.7
3,026,191	-		CCNA_02876	0.68	+1.7
3,026,218	-		CCNA_02876	0.75	+1.7
3,026,241	+		CCNA_02876	0.80	+1.7
3,026,286	-				-0.9
3,026,286	-				+1.7
3,026,288	+				+0.1
3,026,291	-				+0.1
3,026,296	-				+1.7
3,026,296	-				-0.2
3,026,296	-				+0.1
3,026,376	-				-0.3
3,026,376	-				+0.1
3,026,380	-				+0.3
3,026,394	+				-0.0
3,026,417	+				-1.9
3,026,417	+				-0.7
3,026,453	-				+0.3
3,026,473	-				-1.3
3,026,473	-				-0.2
3,026,563	-				-1.4
3,026,594	-		CCNA_02878	0.23	+1.2
3,026,596	-		CCNA_02878	0.25	-0.2
3,026,721	+				+1.5
3,026,731	+				-1.6
3,026,748	+				+0.7
3,026,788	-				-0.3
3,026,827	-		CCNA_02879	0.39	-1.5
3,026,890	-				-1.0
3,026,890	-				-0.9
3,026,908	-				+0.1
3,026,998	+				-0.7
3,027,013	+				-1.5
3,027,022	-				+0.0
3,027,031	-				-0.7
3,027,031	-				-0.8
3,027,054	+				+1.7
3,027,062	-				-2.1
3,027,071	+				-0.9
3,027,071	+				+0.1
3,027,071	+				-0.1
3,027,071	+				+0.5
3,027,071	+				+0.9
3,027,079	-				-0.7
3,027,079	-				+0.1
3,027,079	-				+0.1
3,027,079	-				-0.3
3,027,079	-				-1.7
3,027,079	-				+0.2
3,027,079	-				-1.0
3,027,079	-				-1.8
3,027,079	-				-0.3
3,027,079	-				+0.7
3,027,111	-				-0.8
3,027,128	+				-0.7
3,027,136	-				+0.1
3,027,166	+				-0.1
3,027,166	+				+0.3
3,027,166	+				+0.1
3,027,171	+				-1.3
3,027,173	+				-0.7
3,027,174	-				+1.9
3,027,174	-				+0.3
3,027,174	-				-0.5
3,027,174	-				+1.1
3,027,174	-				+0.3
3,027,195	-		CCNA_02880	0.11	+0.2
3,027,217	-		CCNA_02880	0.12	-0.8
3,027,251	-		CCNA_02880	0.14	-0.3
3,027,271	+		CCNA_02880	0.15	-1.5
3,027,274	-		CCNA_02880	0.15	+0.9
3,027,274	-		CCNA_02880	0.15	+0.4
3,027,274	-		CCNA_02880	0.15	-0.5
3,027,279	-		CCNA_02880	0.15	+2.7
3,027,279	-		CCNA_02880	0.15	-0.3
3,027,279	-		CCNA_02880	0.15	-1.1
3,027,284	-		CCNA_02880	0.16	+1.9
3,027,332	+		CCNA_02880	0.19	+2.4
3,027,340	-		CCNA_02880	0.19	-1.0
3,027,340	-		CCNA_02880	0.19	+1.1
3,027,340	-		CCNA_02880	0.19	-1.4
3,027,351	+		CCNA_02880	0.20	-0.7
3,027,408	+		CCNA_02880	0.23	-1.3
3,027,488	-		CCNA_02880	0.28	+0.3
3,027,502	+		CCNA_02880	0.29	+1.7
3,027,510	-		CCNA_02880	0.29	+0.1
3,027,510	-		CCNA_02880	0.29	-0.1
3,027,510	-		CCNA_02880	0.29	+0.1
3,027,558	+		CCNA_02880	0.32	-1.9
3,027,599	-		CCNA_02880	0.34	+1.5
3,027,622	-		CCNA_02880	0.36	-0.8
3,027,643	-				+0.3
3,027,688	+		CCNA_02880	0.39	+0.2
3,027,688	+		CCNA_02880	0.39	-1.1
3,027,688	+		CCNA_02880	0.39	-1.7
3,027,688	+		CCNA_02880	0.39	+1.3
3,027,688	+		CCNA_02880	0.39	+2.7
3,027,688	+		CCNA_02880	0.39	+0.1
3,027,688	+		CCNA_02880	0.39	-0.9
3,027,688	+		CCNA_02880	0.39	+2.3
3,027,688	+		CCNA_02880	0.39	+0.9
3,027,688	+		CCNA_02880	0.39	-0.1
3,027,696	-		CCNA_02880	0.40	-0.5
3,027,696	-		CCNA_02880	0.40	-0.4
3,027,696	-		CCNA_02880	0.40	+1.7
3,027,696	-		CCNA_02880	0.40	+1.2
3,027,696	-		CCNA_02880	0.40	-0.3
3,027,696	-		CCNA_02880	0.40	-0.7
3,027,699	+		CCNA_02880	0.40	-0.5
3,027,719	+		CCNA_02880	0.41	-0.4
3,027,727	-		CCNA_02880	0.42	-0.8
3,027,727	-				+1.7
3,027,794	-		CCNA_02880	0.46	-1.5
3,027,804	-		CCNA_02880	0.46	+0.7
3,027,830	+		CCNA_02880	0.48	+0.1
3,027,848	-				+3.3
3,027,854	+		CCNA_02880	0.49	-1.1
3,027,854	+		CCNA_02880	0.49	+1.1
3,027,862	-		CCNA_02880	0.50	-0.3
3,027,862	-		CCNA_02880	0.50	+2.7
3,027,878	+		CCNA_02880	0.51	+0.1
3,027,880	+		CCNA_02880	0.51	-0.8