Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02863

Experiment: PYE with Benzalkonium Chloride 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Benzalkonium Chloride 0.0001 mg/ml
3,015,989	-		CCNA_02862	0.44	+1.1
3,015,991	+		CCNA_02862	0.44	+0.7
3,015,997	-		CCNA_02862	0.44	-1.2
3,015,999	-		CCNA_02862	0.44	+0.1
3,016,022	+		CCNA_02862	0.46	+0.3
3,016,034	+		CCNA_02862	0.46	+0.1
3,016,034	+		CCNA_02862	0.46	-2.0
3,016,034	-		CCNA_02862	0.46	+0.1
3,016,039	+		CCNA_02862	0.47	-0.1
3,016,039	+		CCNA_02862	0.47	-0.1
3,016,047	-		CCNA_02862	0.47	-0.3
3,016,047	-		CCNA_02862	0.47	-0.5
3,016,047	-		CCNA_02862	0.47	+1.1
3,016,047	-		CCNA_02862	0.47	-2.1
3,016,047	-		CCNA_02862	0.47	+0.3
3,016,093	-		CCNA_02862	0.50	+0.9
3,016,114	-		CCNA_02862	0.52	+1.1
3,016,129	-		CCNA_02862	0.53	+0.3
3,016,136	-		CCNA_02862	0.53	-0.1
3,016,174	+		CCNA_02862	0.56	+2.7
3,016,174	+		CCNA_02862	0.56	+0.1
3,016,174	+		CCNA_02862	0.56	+1.7
3,016,181	-		CCNA_02862	0.56	+0.1
3,016,182	-		CCNA_02862	0.56	+0.7
3,016,187	-		CCNA_02862	0.56	-0.9
3,016,189	+		CCNA_02862	0.57	+0.3
3,016,189	+		CCNA_02862	0.57	+2.7
3,016,197	-		CCNA_02862	0.57	+1.1
3,016,241	-		CCNA_02862	0.60	+1.9
3,016,247	+		CCNA_02862	0.60	+2.1
3,016,247	+		CCNA_02862	0.60	+1.1
3,016,247	+		CCNA_02862	0.60	+0.1
3,016,255	-		CCNA_02862	0.61	+0.3
3,016,255	-		CCNA_02862	0.61	-0.8
3,016,255	-		CCNA_02862	0.61	-0.9
3,016,260	+		CCNA_02862	0.61	+0.7
3,016,260	+		CCNA_02862	0.61	+1.7
3,016,279	-		CCNA_02862	0.62	+0.3
3,016,294	+		CCNA_02862	0.63	-0.8
3,016,360	-		CCNA_02862	0.68	+1.3
3,016,362	+		CCNA_02862	0.68	-1.4
3,016,368	-		CCNA_02862	0.68	-0.5
3,016,370	-		CCNA_02862	0.68	+0.3
3,016,382	-		CCNA_02862	0.69	-0.5
3,016,382	-		CCNA_02862	0.69	+0.7
3,016,385	+		CCNA_02862	0.69	+0.7
3,016,434	+		CCNA_02862	0.72	+2.4
3,016,475	+		CCNA_02862	0.75	+0.1
3,016,493	+		CCNA_02862	0.76	-1.3
3,016,498	+		CCNA_02862	0.77	+1.7
3,016,581	+		CCNA_02862	0.82	-1.1
3,016,654	-		CCNA_02862	0.87	+2.7
3,016,671	-		CCNA_02862	0.88	+2.3
3,016,675	+		CCNA_02862	0.88	-2.0
3,016,678	-		CCNA_02862	0.88	+1.7
3,016,713	+				-0.5
3,016,713	+				-0.3
3,016,713	+				-1.0
3,016,713	+				+0.7
3,016,713	+				-0.3
3,016,713	+				+0.3
3,016,713	+				+0.1
3,016,713	+				+1.7
3,016,713	+				+0.7
3,016,713	+				-0.9
3,016,718	+				+2.7
3,016,721	-				+0.3
3,016,721	-				+0.7
3,016,721	-				-1.8
3,016,721	-				-1.6
3,016,721	-				-0.8
3,016,721	-				+0.1
3,016,721	-				+0.1
3,016,721	-				-0.1
3,016,721	-				+0.3
3,016,721	-				-0.1
3,016,728	+				+1.1
3,016,781	+				+0.3
3,016,845	+				+1.1
3,016,853	-				-1.3
3,016,858	+				+0.1
3,016,893	+				-0.1
3,016,902	+				-0.5
3,016,952	+				-0.3
3,016,976	-				-1.1
3,016,983	+				+0.1
3,016,987	+				-1.3
3,016,995	-				-0.8
3,016,999	+				-0.8
3,017,002	+				-0.1
3,017,010	-				+0.6
3,017,036	-				-1.2
3,017,080	+		CCNA_02863	0.15	+1.3
3,017,080	-		CCNA_02863	0.15	-1.7
3,017,088	-		CCNA_02863	0.17	-0.5
3,017,108	+		CCNA_02863	0.20	-0.1
3,017,129	+		CCNA_02863	0.23	+1.7
3,017,132	-		CCNA_02863	0.24	+0.1
3,017,144	+		CCNA_02863	0.26	+1.1
3,017,147	-		CCNA_02863	0.26	-0.3
3,017,183	+		CCNA_02863	0.32	+2.7
3,017,183	+		CCNA_02863	0.32	-0.2
3,017,234	-		CCNA_02863	0.40	+0.3
3,017,268	+		CCNA_02863	0.46	-0.3
3,017,283	+		CCNA_02863	0.48	-2.1
3,017,283	+		CCNA_02863	0.48	-0.9
3,017,311	-		CCNA_02863	0.52	+0.7
3,017,315	+		CCNA_02863	0.53	-0.7
3,017,364	+		CCNA_02863	0.61	-1.1
3,017,373	+		CCNA_02863	0.62	-0.8
3,017,378	+		CCNA_02863	0.63	+0.1
3,017,393	+		CCNA_02863	0.66	-1.6
3,017,422	+		CCNA_02863	0.70	-1.5
3,017,434	-		CCNA_02863	0.72	+0.1
3,017,506	-		CCNA_02863	0.84	+2.7
3,017,538	-		CCNA_02863	0.89	-0.8
3,017,543	-		CCNA_02863	0.90	-1.8
3,017,543	-		CCNA_02863	0.90	-0.3
3,017,560	+				-0.7
3,017,570	+				-2.4
3,017,578	-				-0.3
3,017,582	+				+2.7
3,017,608	-				+0.5
3,017,630	+				-0.1
3,017,648	+				+2.7
3,017,648	+				+1.7
3,017,697	-		CCNA_02864	0.15	+1.9
3,017,709	+		CCNA_02864	0.17	+0.1
3,017,709	+		CCNA_02864	0.17	-0.3
3,017,717	-		CCNA_02864	0.18	-0.9
3,017,717	-		CCNA_02864	0.18	+0.7
3,017,720	-		CCNA_02864	0.19	-0.1
3,017,726	-		CCNA_02864	0.20	+1.7
3,017,731	-		CCNA_02864	0.21	-1.0
3,017,773	-		CCNA_02864	0.27	-0.0
3,017,785	-		CCNA_02864	0.29	-0.1
3,017,792	+		CCNA_02864	0.30	-0.3
3,017,794	+		CCNA_02864	0.31	+0.7
3,017,837	+		CCNA_02864	0.37	-2.3
3,017,866	+		CCNA_02864	0.42	+0.2
3,017,903	+		CCNA_02864	0.48	-0.1
3,017,932	+		CCNA_02864	0.53	+0.3
3,017,951	+		CCNA_02864	0.56	+1.1
3,017,968	+		CCNA_02864	0.58	-2.0
3,017,972	-		CCNA_02864	0.59	+1.1
3,017,976	-		CCNA_02864	0.60	+1.5
3,017,979	-		CCNA_02864	0.60	+1.1
3,018,010	-		CCNA_02864	0.65	+0.5
3,018,030	-		CCNA_02864	0.68	+0.7
3,018,030	-		CCNA_02864	0.68	-1.3
3,018,034	+		CCNA_02864	0.69	-0.3
3,018,053	-		CCNA_02864	0.72	+0.3
3,018,096	+		CCNA_02864	0.79	-0.7
3,018,111	-		CCNA_02864	0.81	-1.1
3,018,153	-		CCNA_02864	0.88	+0.1
3,018,169	+				+0.1
3,018,169	+				-0.1
3,018,174	+				+0.7
3,018,174	+				-1.3
3,018,174	+				+1.7
3,018,177	-				-2.1
3,018,182	-				+0.7
3,018,182	-				+1.1
3,018,192	+				-0.8
3,018,200	-				+2.1
3,018,209	-				+1.1
3,018,226	+				-1.2
3,018,231	+				-0.7
3,018,239	-				+2.2
3,018,253	-				-1.3
3,018,273	+				-0.3
3,018,281	+				-0.3
3,018,282	+				+0.7
3,018,282	-				+0.3
3,018,296	-		CCNA_02865	0.11	-0.8
3,018,296	-		CCNA_02865	0.11	-0.5
3,018,375	+		CCNA_02865	0.23	+0.7
3,018,375	+		CCNA_02865	0.23	-0.7
3,018,383	-		CCNA_02865	0.24	+0.7
3,018,383	-		CCNA_02865	0.24	-0.0
3,018,383	-		CCNA_02865	0.24	-0.7
3,018,383	-		CCNA_02865	0.24	+0.1
3,018,383	-		CCNA_02865	0.24	+1.7
3,018,383	-		CCNA_02865	0.24	-0.5
3,018,384	+		CCNA_02865	0.25	+2.7
3,018,384	+		CCNA_02865	0.25	-0.5
3,018,486	+		CCNA_02865	0.41	+0.1
3,018,495	-		CCNA_02865	0.42	-0.8
3,018,524	+		CCNA_02865	0.47	-0.8
3,018,524	+		CCNA_02865	0.47	+2.7
3,018,526	+		CCNA_02865	0.47	+1.7
3,018,533	-		CCNA_02865	0.48	+0.9
3,018,539	-		CCNA_02865	0.49	-1.3