Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02787

Experiment: PYE with Benzalkonium Chloride 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Benzalkonium Chloride 0.0001 mg/ml
2,943,769	-		CCNA_02785	0.72	-1.1
2,943,783	+		CCNA_02785	0.74	+0.5
2,943,791	-		CCNA_02785	0.75	+1.1
2,943,791	-		CCNA_02785	0.75	+1.6
2,943,823	+		CCNA_02785	0.78	+0.2
2,943,823	+		CCNA_02785	0.78	+0.2
2,943,823	+		CCNA_02785	0.78	-0.1
2,943,839	+		CCNA_02785	0.80	+2.6
2,943,854	+		CCNA_02785	0.82	+0.2
2,943,858	+		CCNA_02785	0.82	-0.5
2,943,862	-		CCNA_02785	0.83	+0.3
2,943,866	-		CCNA_02785	0.83	-1.2
2,943,880	+		CCNA_02785	0.84	-0.2
2,943,886	+		CCNA_02785	0.85	+1.6
2,943,889	+		CCNA_02785	0.85	+0.3
2,943,889	-		CCNA_02785	0.85	+0.7
2,943,928	+		CCNA_02785	0.90	-0.9
2,943,941	-				+0.9
2,943,948	+				+0.2
2,943,976	-				-0.7
2,943,980	-				+0.3
2,943,980	-				+1.9
2,943,980	-				-1.5
2,943,980	-				-0.2
2,943,985	-				+1.1
2,943,995	+				-0.4
2,944,005	+				+0.6
2,944,013	-				+1.6
2,944,016	+				-0.2
2,944,030	+				-0.4
2,944,039	+				-1.1
2,944,073	+				-0.2
2,944,091	+				+1.1
2,944,099	-		CCNA_02786	0.11	+0.6
2,944,144	+		CCNA_02786	0.17	+0.6
2,944,172	+		CCNA_02786	0.21	+0.6
2,944,172	+		CCNA_02786	0.21	+1.6
2,944,185	+		CCNA_02786	0.23	-1.4
2,944,190	-		CCNA_02786	0.24	+1.6
2,944,195	+		CCNA_02786	0.25	-0.2
2,944,207	+		CCNA_02786	0.26	-1.2
2,944,215	-		CCNA_02786	0.27	+1.9
2,944,215	-		CCNA_02786	0.27	+1.6
2,944,216	-		CCNA_02786	0.28	+2.6
2,944,231	+		CCNA_02786	0.30	+0.6
2,944,270	+		CCNA_02786	0.35	+0.3
2,944,309	+		CCNA_02786	0.41	+0.1
2,944,309	+		CCNA_02786	0.41	-0.5
2,944,309	+		CCNA_02786	0.41	+0.6
2,944,309	+		CCNA_02786	0.41	+0.6
2,944,317	-		CCNA_02786	0.42	+1.1
2,944,317	-		CCNA_02786	0.42	-0.9
2,944,333	+		CCNA_02786	0.44	+0.8
2,944,341	-				+1.6
2,944,341	-		CCNA_02786	0.45	+2.6
2,944,361	+		CCNA_02786	0.48	+0.1
2,944,372	+		CCNA_02786	0.50	-2.2
2,944,372	+		CCNA_02786	0.50	-0.5
2,944,380	-		CCNA_02786	0.51	+1.1
2,944,382	+		CCNA_02786	0.51	-0.7
2,944,382	+		CCNA_02786	0.51	-1.8
2,944,382	+		CCNA_02786	0.51	+1.6
2,944,388	-		CCNA_02786	0.52	+0.3
2,944,390	-		CCNA_02786	0.52	-0.2
2,944,391	+				+1.6
2,944,401	-		CCNA_02786	0.54	-0.9
2,944,405	+		CCNA_02786	0.55	+0.1
2,944,420	-		CCNA_02786	0.57	-1.8
2,944,431	+		CCNA_02786	0.58	-0.8
2,944,431	-		CCNA_02786	0.58	-0.3
2,944,480	+				+1.1
2,944,513	+		CCNA_02786	0.70	-0.2
2,944,519	+		CCNA_02786	0.71	+0.5
2,944,521	-		CCNA_02786	0.71	+1.6
2,944,521	-		CCNA_02786	0.71	+1.1
2,944,526	-		CCNA_02786	0.72	+1.1
2,944,527	-		CCNA_02786	0.72	-0.4
2,944,537	-		CCNA_02786	0.73	-0.5
2,944,558	+		CCNA_02786	0.76	-0.8
2,944,600	+		CCNA_02786	0.82	-0.5
2,944,603	-		CCNA_02786	0.83	+0.3
2,944,603	-		CCNA_02786	0.83	-0.7
2,944,603	-		CCNA_02786	0.83	-0.7
2,944,617	+		CCNA_02786	0.85	-0.8
2,944,641	-		CCNA_02786	0.88	+1.6
2,944,644	-		CCNA_02786	0.89	-0.5
2,944,703	+				-1.2
2,944,713	+				-2.8
2,944,713	+				+2.1
2,944,713	+				-2.1
2,944,721	-				+0.3
2,944,721	-				+1.1
2,944,721	-				+1.6
2,944,721	-				-0.5
2,944,749	+				+2.1
2,944,750	+				+2.6
2,944,751	+				+0.3
2,944,784	+				+1.6
2,944,816	+		CCNA_02787	0.16	-0.9
2,944,825	-		CCNA_02787	0.17	+1.1
2,944,847	-		CCNA_02787	0.22	+2.6
2,944,847	-		CCNA_02787	0.22	-0.2
2,944,847	-		CCNA_02787	0.22	-0.4
2,944,849	+		CCNA_02787	0.22	+0.1
2,944,870	-		CCNA_02787	0.26	-1.8
2,944,893	+		CCNA_02787	0.31	+0.6
2,944,893	+		CCNA_02787	0.31	-0.4
2,944,895	+		CCNA_02787	0.31	-0.7
2,944,895	+		CCNA_02787	0.31	-0.4
2,944,901	-		CCNA_02787	0.32	+0.3
2,944,910	+		CCNA_02787	0.34	-1.9
2,944,910	+		CCNA_02787	0.34	+1.1
2,944,910	+		CCNA_02787	0.34	-0.3
2,944,951	+		CCNA_02787	0.42	-0.7
2,944,988	+		CCNA_02787	0.49	-0.9
2,944,993	-		CCNA_02787	0.50	-1.6
2,945,024	+		CCNA_02787	0.56	+0.5
2,945,027	-		CCNA_02787	0.57	-1.2
2,945,095	-		CCNA_02787	0.70	-2.1
2,945,095	-		CCNA_02787	0.70	-2.8
2,945,128	+		CCNA_02787	0.77	+1.6
2,945,136	-		CCNA_02787	0.78	+0.1
2,945,136	-		CCNA_02787	0.78	-0.8
2,945,139	+		CCNA_02787	0.79	+0.1
2,945,139	+		CCNA_02787	0.79	-1.3
2,945,141	-		CCNA_02787	0.79	+0.6
2,945,161	-		CCNA_02787	0.83	+2.6
2,945,182	-		CCNA_02787	0.87	+0.3
2,945,187	+		CCNA_02787	0.88	+1.6
2,945,197	+				+0.4
2,945,197	+				-0.7
2,945,197	+				-0.1
2,945,234	+				+1.6
2,945,238	+				-0.8
2,945,238	+				+0.1
2,945,238	+				-0.1
2,945,240	-				+1.6
2,945,246	-				-0.4
2,945,254	+				+0.2
2,945,285	+				+1.2
2,945,294	+				+1.0
2,945,296	+				+2.6
2,945,339	-				+0.3
2,945,352	+				-1.4
2,945,360	-				+0.3
2,945,362	+				+1.6
2,945,370	-				-0.5
2,945,370	-				-0.7
2,945,405	+				+0.1
2,945,405	+				-0.7
2,945,413	-				+1.1
2,945,532	-		CCNA_02788	0.11	+1.1
2,945,537	-		CCNA_02788	0.13	+0.6
2,945,537	-		CCNA_02788	0.13	+0.1
2,945,560	-		CCNA_02788	0.23	+1.1
2,945,574	-		CCNA_02788	0.29	-0.8
2,945,628	-		CCNA_02788	0.53	+0.6
2,945,725	-				+1.1
2,945,795	+				-0.4
2,945,803	-				+0.8
2,945,807	+				-1.9
2,945,807	+				+1.1
2,945,815	-				+1.5
2,945,815	-				+0.4
2,945,815	-				-0.5
2,945,815	-				+1.0
2,945,815	-				+2.6
2,945,815	-				+0.0
2,945,885	-		CCNA_02789	0.34	+0.6
2,945,918	+		CCNA_02789	0.50	-0.4
2,945,918	+		CCNA_02789	0.50	+0.1
2,945,937	+		CCNA_02789	0.59	-0.2
2,945,950	+		CCNA_02789	0.65	-0.8
2,946,026	+				+0.1
2,946,034	-				-0.9
2,946,051	+				-0.5
2,946,052	-				+1.1
2,946,052	-				-0.3
2,946,101	+				-0.2
2,946,114	-				-1.4
2,946,126	-				+0.8
2,946,144	-				+1.1
2,946,147	+				-0.9
2,946,207	-				-0.9
2,946,222	-		CCNA_02790	0.13	+1.1