Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02631

Experiment: PYE with Benzalkonium Chloride 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Benzalkonium Chloride 0.0001 mg/ml
2,781,021	+				-0.3
2,781,072	+		CCNA_02630	0.13	+3.5
2,781,080	-		CCNA_02630	0.14	+2.5
2,781,091	-		CCNA_02630	0.16	-1.4
2,781,118	+		CCNA_02630	0.21	+0.7
2,781,126	-		CCNA_02630	0.23	+0.5
2,781,126	-		CCNA_02630	0.23	-2.8
2,781,183	-		CCNA_02630	0.34	-0.7
2,781,183	-		CCNA_02630	0.34	-1.4
2,781,196	+		CCNA_02630	0.36	-0.0
2,781,204	-		CCNA_02630	0.38	-0.3
2,781,252	-		CCNA_02630	0.47	-1.0
2,781,254	+		CCNA_02630	0.48	-0.7
2,781,287	-		CCNA_02630	0.54	-2.8
2,781,315	+		CCNA_02630	0.59	-0.5
2,781,433	+		CCNA_02630	0.82	+0.7
2,781,529	-				+0.9
2,781,529	-				+2.5
2,781,529	-				+2.5
2,781,529	-				-1.3
2,781,613	+				-0.3
2,781,623	+		CCNA_02631	0.15	+0.9
2,781,640	-		CCNA_02631	0.25	-1.3
2,781,724	+		CCNA_02631	0.73	+0.1
2,781,732	-		CCNA_02631	0.78	-0.7
2,781,733	+		CCNA_02631	0.78	-0.5
2,781,751	+		CCNA_02631	0.89	+1.5
2,781,841	-				+1.5
2,781,854	-				+0.1
2,781,865	-				-1.4
2,781,884	-				-1.7
2,781,922	+				-0.5
2,781,930	+				-0.5
2,781,961	+				-0.1
2,781,979	+				-1.3
2,781,996	+				-0.7
2,781,996	+				+0.5
2,781,996	+				+0.1
2,781,996	+				+1.5
2,781,996	+				-1.7
2,781,996	+				-1.5
2,782,004	-				-1.1
2,782,004	-				-0.5
2,782,004	-				+2.5
2,782,004	-				+0.4
2,782,004	-				-0.4
2,782,004	-				-1.2
2,782,004	-				+0.5
2,782,037	+				+0.0
2,782,040	-				-1.1
2,782,060	+				+1.5
2,782,060	+				+1.5
2,782,068	-				-2.3
2,782,070	+				-0.7
2,782,078	-				+0.1
2,782,078	-				+0.5
2,782,080	+				-0.5
2,782,083	-				+0.7
2,782,083	-				-2.1
2,782,088	-				+0.5
2,782,111	+				-0.3
2,782,125	-				+1.5
2,782,130	-				+0.1
2,782,137	-				+0.5
2,782,152	-				-0.9
2,782,181	+				-0.1
2,782,209	-		CCNA_02632	0.14	-1.4
2,782,216	+		CCNA_02632	0.15	-1.2
2,782,216	-		CCNA_02632	0.15	-0.3
2,782,224	+		CCNA_02632	0.17	+1.5
2,782,235	+		CCNA_02632	0.18	+0.1
2,782,235	+		CCNA_02632	0.18	-0.1
2,782,235	+		CCNA_02632	0.18	-0.7
2,782,243	-		CCNA_02632	0.20	+2.5
2,782,243	-		CCNA_02632	0.20	+0.9
2,782,243	-		CCNA_02632	0.20	-0.7
2,782,253	+		CCNA_02632	0.21	-0.4
2,782,276	-		CCNA_02632	0.25	-0.3
2,782,360	+		CCNA_02632	0.38	+0.9
2,782,368	-		CCNA_02632	0.40	-0.1
2,782,368	-		CCNA_02632	0.40	-1.9
2,782,371	+		CCNA_02632	0.40	-0.1
2,782,405	+		CCNA_02632	0.45	-0.9
2,782,410	+		CCNA_02632	0.46	+0.1
2,782,413	-		CCNA_02632	0.47	-1.1
2,782,413	-		CCNA_02632	0.47	-0.9
2,782,442	-		CCNA_02632	0.51	-0.2
2,782,448	+		CCNA_02632	0.52	-1.0
2,782,461	-		CCNA_02632	0.54	+0.5
2,782,470	+		CCNA_02632	0.56	-0.1
2,782,470	-		CCNA_02632	0.56	-1.8
2,782,470	-		CCNA_02632	0.56	-0.1
2,782,493	+		CCNA_02632	0.59	+0.5
2,782,505	+		CCNA_02632	0.61	+0.9
2,782,510	-		CCNA_02632	0.62	+0.2
2,782,564	+		CCNA_02632	0.71	-0.3
2,782,574	+		CCNA_02632	0.72	-1.4
2,782,574	+		CCNA_02632	0.72	-1.0
2,782,574	+		CCNA_02632	0.72	-0.3
2,782,579	+		CCNA_02632	0.73	+0.5
2,782,582	-		CCNA_02632	0.74	+0.1
2,782,582	-		CCNA_02632	0.74	-1.3
2,782,587	-		CCNA_02632	0.74	-0.1
2,782,608	-		CCNA_02632	0.78	+1.2
2,782,608	-		CCNA_02632	0.78	+1.1
2,782,621	-		CCNA_02632	0.80	-2.5
2,782,634	+		CCNA_02632	0.82	-0.7
2,782,680	+		CCNA_02632	0.89	-0.3
2,782,680	+		CCNA_02632	0.89	+0.9
2,782,688	-				-0.1
2,782,688	-				+0.9
2,782,688	-				+1.5
2,782,688	-				-0.7
2,782,689	+				-0.1
2,782,690	+				-0.1
2,782,731	-				-0.1
2,782,749	+				-1.0
2,782,757	-				+1.5
2,782,757	-				+0.6