Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02506

Experiment: PYE with Benzalkonium Chloride 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Benzalkonium Chloride 0.0001 mg/ml
2,655,084	-		CCNA_02505	0.35	-0.6
2,655,131	-		CCNA_02505	0.40	-1.1
2,655,131	-		CCNA_02505	0.40	-0.0
2,655,131	-		CCNA_02505	0.40	+1.6
2,655,163	-		CCNA_02505	0.43	+2.6
2,655,183	+		CCNA_02505	0.45	-0.1
2,655,274	-		CCNA_02505	0.55	+0.2
2,655,278	+		CCNA_02505	0.55	+0.3
2,655,278	+		CCNA_02505	0.55	-0.7
2,655,278	+		CCNA_02505	0.55	-0.7
2,655,278	+		CCNA_02505	0.55	+4.2
2,655,278	+		CCNA_02505	0.55	-1.1
2,655,286	-		CCNA_02505	0.56	+0.3
2,655,286	-		CCNA_02505	0.56	-0.9
2,655,286	-		CCNA_02505	0.56	-1.3
2,655,286	-		CCNA_02505	0.56	-1.0
2,655,286	-		CCNA_02505	0.56	+1.0
2,655,286	-		CCNA_02505	0.56	+1.2
2,655,342	+		CCNA_02505	0.62	-1.2
2,655,393	+		CCNA_02505	0.67	-0.2
2,655,398	+		CCNA_02505	0.67	-0.0
2,655,406	-		CCNA_02505	0.68	+1.0
2,655,424	-		CCNA_02505	0.70	+0.3
2,655,447	-		CCNA_02505	0.72	-0.9
2,655,480	-		CCNA_02505	0.76	-1.2
2,655,482	-		CCNA_02505	0.76	-1.2
2,655,482	-		CCNA_02505	0.76	-0.2
2,655,508	-		CCNA_02505	0.79	-0.9
2,655,523	-		CCNA_02505	0.80	+0.6
2,655,537	-		CCNA_02505	0.82	-0.0
2,655,559	+		CCNA_02505	0.84	-1.2
2,655,563	+		CCNA_02505	0.84	+1.6
2,655,585	-		CCNA_02505	0.87	+1.3
2,655,593	-		CCNA_02505	0.88	-0.6
2,655,603	-		CCNA_02505	0.89	+1.0
2,655,608	-		CCNA_02505	0.89	-0.0
2,655,613	-		CCNA_02505	0.90	+0.4
2,655,618	+				-1.3
2,655,618	+				-2.1
2,655,628	+				+0.3
2,655,654	+				+0.7
2,655,715	-				+0.6
2,655,795	-				+0.3
2,655,798	+				-0.9
2,655,798	+				-1.0
2,655,806	-				+1.0
2,655,807	-				+1.6
2,655,835	+				-0.4
2,655,835	+				-1.3
2,655,835	+				-0.2
2,655,835	+				-0.0
2,655,842	-				+1.6
2,655,843	-				-1.4
2,655,863	+				+1.3
2,655,871	-				-0.2
2,655,886	+				-0.6
2,655,886	+				-1.4
2,655,910	+				-1.0
2,655,941	-				-0.6
2,655,981	+				+0.6
2,655,989	-				-0.4
2,655,989	-				-0.4
2,655,990	-				+0.6
2,656,031	-				-0.4
2,656,031	-				-0.0
2,656,038	+				+1.0
2,656,040	+				-1.1
2,656,040	+				-0.2
2,656,046	-				+1.0
2,656,058	+				+1.0
2,656,067	-				-1.2
2,656,076	+				-1.6
2,656,093	-		CCNA_02506	0.13	+1.2
2,656,113	+		CCNA_02506	0.28	-1.2
2,656,113	-		CCNA_02506	0.28	-0.4
2,656,145	+		CCNA_02506	0.50	+1.6
2,656,145	+		CCNA_02506	0.50	+0.6
2,656,145	+		CCNA_02506	0.50	-1.6
2,656,153	-		CCNA_02506	0.56	-0.8
2,656,193	-		CCNA_02506	0.84	+0.3
2,656,217	+				-1.6
2,656,259	-				-0.4
2,656,313	-				+0.3
2,656,371	+				+1.8
2,656,379	-				-0.3
2,656,379	-				+2.0
2,656,379	-				+0.9
2,656,653	+				-0.1
2,656,655	+				-2.4
2,656,663	+				-1.5
2,656,666	-				-0.9
2,656,669	+				+1.3
2,656,671	-				+0.7
2,656,677	-				+0.6
2,656,684	-				+0.3
2,656,691	-				+1.6
2,656,723	+				+2.6
2,656,793	+				+1.6
2,656,801	+		CCNA_02507	0.10	-1.3
2,656,801	+		CCNA_02507	0.10	-0.4
2,656,809	-		CCNA_02507	0.11	+1.6
2,656,809	-		CCNA_02507	0.11	-0.6
2,656,835	-		CCNA_02507	0.12	-0.6
2,656,888	-		CCNA_02507	0.16	-0.7
2,656,889	-		CCNA_02507	0.16	+0.6
2,656,902	-		CCNA_02507	0.17	-1.1
2,656,912	+		CCNA_02507	0.17	+0.9
2,656,912	+		CCNA_02507	0.17	-0.0
2,656,922	+				+1.6
2,656,949	+		CCNA_02507	0.20	+0.6
2,656,949	+		CCNA_02507	0.20	-0.4
2,656,959	+				+2.6
2,656,972	+		CCNA_02507	0.21	+1.7
2,656,972	+		CCNA_02507	0.21	-0.0
2,656,980	-		CCNA_02507	0.22	-1.1
2,656,980	-		CCNA_02507	0.22	-1.6
2,656,995	+		CCNA_02507	0.23	+0.4
2,656,995	-		CCNA_02507	0.23	-0.0
2,657,000	+		CCNA_02507	0.23	+1.1
2,657,013	+		CCNA_02507	0.24	+0.6
2,657,019	+		CCNA_02507	0.25	+1.7
2,657,021	-		CCNA_02507	0.25	+0.6
2,657,037	+		CCNA_02507	0.26	+1.7
2,657,045	-		CCNA_02507	0.26	-0.0
2,657,077	-		CCNA_02507	0.28	-1.0
2,657,125	-		CCNA_02507	0.32	+0.6
2,657,131	+		CCNA_02507	0.32	+1.6
2,657,137	+		CCNA_02507	0.32	+0.7
2,657,193	-		CCNA_02507	0.36	+0.3