Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02480

Experiment: PYE with Benzalkonium Chloride 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Benzalkonium Chloride 0.0001 mg/ml
2,624,044	+		CCNA_02479	0.12	-0.0
2,624,052	-		CCNA_02479	0.13	-2.8
2,624,052	-		CCNA_02479	0.13	-0.0
2,624,077	-		CCNA_02479	0.15	-0.5
2,624,145	-		CCNA_02479	0.21	+0.5
2,624,148	+		CCNA_02479	0.22	-0.9
2,624,165	-		CCNA_02479	0.23	-0.8
2,624,165	-		CCNA_02479	0.23	-0.9
2,624,168	+		CCNA_02479	0.23	-1.5
2,624,215	-		CCNA_02479	0.28	-0.5
2,624,238	+		CCNA_02479	0.30	+2.5
2,624,246	-		CCNA_02479	0.31	-0.3
2,624,246	-		CCNA_02479	0.31	-1.2
2,624,246	-		CCNA_02479	0.31	-0.5
2,624,246	-		CCNA_02479	0.31	-2.0
2,624,276	-		CCNA_02479	0.33	-1.3
2,624,303	+		CCNA_02479	0.36	-0.0
2,624,303	+		CCNA_02479	0.36	-1.8
2,624,303	+		CCNA_02479	0.36	+2.5
2,624,311	-		CCNA_02479	0.36	-0.0
2,624,318	-		CCNA_02479	0.37	-0.5
2,624,326	+		CCNA_02479	0.38	-0.6
2,624,361	-		CCNA_02479	0.41	+0.2
2,624,380	-				+2.5
2,624,385	-		CCNA_02479	0.43	+0.5
2,624,385	-		CCNA_02479	0.43	+0.5
2,624,399	-		CCNA_02479	0.44	-0.8
2,624,417	-		CCNA_02479	0.46	+0.2
2,624,464	+		CCNA_02479	0.50	+1.5
2,624,464	+		CCNA_02479	0.50	-0.5
2,624,464	+		CCNA_02479	0.50	-1.8
2,624,472	-		CCNA_02479	0.51	+0.2
2,624,518	-		CCNA_02479	0.55	-1.3
2,624,526	-		CCNA_02479	0.56	+0.2
2,624,541	+		CCNA_02479	0.57	-0.3
2,624,549	-		CCNA_02479	0.58	-0.8
2,624,566	+		CCNA_02479	0.60	+2.5
2,624,578	+		CCNA_02479	0.61	+1.0
2,624,592	+		CCNA_02479	0.62	+1.0
2,624,626	+		CCNA_02479	0.65	-0.8
2,624,626	+		CCNA_02479	0.65	+1.5
2,624,629	-		CCNA_02479	0.65	+0.8
2,624,634	-		CCNA_02479	0.66	-2.0
2,624,678	-		CCNA_02479	0.70	+0.5
2,624,686	-		CCNA_02479	0.70	+0.2
2,624,726	+		CCNA_02479	0.74	-0.6
2,624,754	-		CCNA_02479	0.77	+0.2
2,624,791	+		CCNA_02479	0.80	+1.0
2,624,799	-		CCNA_02479	0.81	-1.0
2,624,799	-		CCNA_02479	0.81	+1.2
2,624,831	+		CCNA_02479	0.84	+2.0
2,624,839	-		CCNA_02479	0.84	-1.5
2,624,868	-		CCNA_02479	0.87	-0.5
2,624,878	+		CCNA_02479	0.88	+0.2
2,624,894	-		CCNA_02479	0.89	-1.5
2,624,904	-				+2.5
2,624,964	-				-0.3
2,624,964	-				-1.6
2,625,012	+				-0.5
2,625,030	+				+0.7
2,625,030	-				+1.0
2,625,056	-				-1.0
2,625,119	+				+0.5
2,625,214	+		CCNA_02480	0.13	-0.8
2,625,260	+		CCNA_02480	0.16	-0.3
2,625,260	+		CCNA_02480	0.16	-0.8
2,625,260	+		CCNA_02480	0.16	-1.3
2,625,261	+		CCNA_02480	0.16	+0.5
2,625,268	-		CCNA_02480	0.17	-2.1
2,625,291	+		CCNA_02480	0.18	+0.5
2,625,291	+		CCNA_02480	0.18	-0.9
2,625,299	-		CCNA_02480	0.19	-0.0
2,625,299	-		CCNA_02480	0.19	-0.8
2,625,330	+		CCNA_02480	0.21	-0.6
2,625,388	-		CCNA_02480	0.25	-2.3
2,625,391	+		CCNA_02480	0.25	+0.1
2,625,391	+		CCNA_02480	0.25	-0.0
2,625,391	+		CCNA_02480	0.25	-0.9
2,625,399	-		CCNA_02480	0.26	+0.5
2,625,401	-				+2.5
2,625,403	+		CCNA_02480	0.26	-1.9
2,625,406	-		CCNA_02480	0.26	-0.6
2,625,406	-		CCNA_02480	0.26	-1.5
2,625,431	-		CCNA_02480	0.28	+1.0
2,625,440	+		CCNA_02480	0.28	+0.4
2,625,476	+		CCNA_02480	0.31	-0.6
2,625,476	+		CCNA_02480	0.31	+1.0
2,625,476	+		CCNA_02480	0.31	+2.5
2,625,476	+		CCNA_02480	0.31	+0.5
2,625,511	-		CCNA_02480	0.33	-0.3
2,625,611	+		CCNA_02480	0.40	+1.0
2,625,691	+		CCNA_02480	0.46	+2.5
2,625,722	-		CCNA_02480	0.48	+0.7
2,625,738	+		CCNA_02480	0.49	+0.2
2,625,738	+		CCNA_02480	0.49	+1.5
2,625,740	+		CCNA_02480	0.49	+1.0
2,625,745	+		CCNA_02480	0.49	-1.2
2,625,746	-		CCNA_02480	0.49	-0.3
2,625,746	-		CCNA_02480	0.49	-1.2
2,625,746	-		CCNA_02480	0.49	-0.6
2,625,771	-		CCNA_02480	0.51	+2.1
2,625,813	+		CCNA_02480	0.54	-2.2
2,625,827	+		CCNA_02480	0.55	-0.8
2,625,948	+		CCNA_02480	0.63	-1.5
2,625,948	+		CCNA_02480	0.63	-0.2
2,625,948	+		CCNA_02480	0.63	+0.2
2,625,956	-		CCNA_02480	0.64	+1.0
2,625,956	-		CCNA_02480	0.64	-1.0
2,625,966	-		CCNA_02480	0.64	-0.9
2,626,002	+		CCNA_02480	0.67	+0.2
2,626,002	+		CCNA_02480	0.67	+0.2
2,626,002	+		CCNA_02480	0.67	-0.3
2,626,073	+		CCNA_02480	0.72	-0.3
2,626,081	-		CCNA_02480	0.72	-0.3
2,626,086	-		CCNA_02480	0.73	-1.5
2,626,091	+		CCNA_02480	0.73	+0.5
2,626,091	+		CCNA_02480	0.73	+0.7
2,626,092	+		CCNA_02480	0.73	+2.5
2,626,099	-		CCNA_02480	0.73	-1.2
2,626,100	-		CCNA_02480	0.74	-1.5
2,626,120	+		CCNA_02480	0.75	-0.5
2,626,125	+		CCNA_02480	0.75	-1.2
2,626,133	-		CCNA_02480	0.76	+0.3
2,626,146	-		CCNA_02480	0.77	+1.4
2,626,181	-		CCNA_02480	0.79	-0.7
2,626,219	+		CCNA_02480	0.82	+0.2
2,626,219	+		CCNA_02480	0.82	-0.6
2,626,219	+		CCNA_02480	0.82	-0.5
2,626,220	+		CCNA_02480	0.82	-0.5
2,626,238	-		CCNA_02480	0.83	+2.1
2,626,273	-		CCNA_02480	0.85	-1.0
2,626,288	+		CCNA_02480	0.86	+1.2
2,626,367	+				-0.3
2,626,375	-				-0.4
2,626,380	-				+0.8
2,626,410	-				+0.4
2,626,471	-				+2.5
2,626,497	+				+1.0
2,626,506	-				+1.1
2,626,523	+				-0.6
2,626,527	+				-0.0
2,626,534	+				-0.0
2,626,542	-				-1.4
2,626,566	-				-0.0
2,626,578	+				+1.5
2,626,595	-				-0.8
2,626,595	-				-2.3
2,626,619	-				+1.5
2,626,643	-				+1.5
2,626,652	-				-0.3
2,626,657	-				+1.0
2,626,739	+				+0.5
2,626,742	-				+0.2
2,626,742	-				-0.3
2,626,742	-				+0.5
2,626,747	-				+1.5
2,626,747	-				-0.0
2,626,777	+				+0.2
2,626,841	+		CCNA_02481	0.12	+1.5
2,626,867	+		CCNA_02481	0.13	-0.1
2,626,882	+		CCNA_02481	0.13	-1.3
2,626,909	+		CCNA_02481	0.14	+1.5
2,626,917	-		CCNA_02481	0.15	+0.2
2,626,918	-		CCNA_02481	0.15	+0.2
2,626,938	+		CCNA_02481	0.16	-0.1
2,626,938	+		CCNA_02481	0.16	-0.3
2,626,979	-		CCNA_02481	0.17	+0.2
2,626,984	+		CCNA_02481	0.17	-1.6
2,626,989	+		CCNA_02481	0.18	+0.9
2,626,992	-		CCNA_02481	0.18	-1.1
2,627,017	+		CCNA_02481	0.19	+0.5
2,627,032	+		CCNA_02481	0.19	+0.2
2,627,032	+		CCNA_02481	0.19	+0.9
2,627,032	+		CCNA_02481	0.19	-0.8
2,627,040	-		CCNA_02481	0.20	+0.9
2,627,053	+		CCNA_02481	0.20	+1.9
2,627,093	+		CCNA_02481	0.22	+0.5
2,627,113	+		CCNA_02481	0.22	-0.1
2,627,115	+		CCNA_02481	0.22	-0.8
2,627,121	-		CCNA_02481	0.23	-0.7
2,627,121	-		CCNA_02481	0.23	-1.8
2,627,121	-		CCNA_02481	0.23	-0.3
2,627,121	-		CCNA_02481	0.23	+0.9
2,627,121	-		CCNA_02481	0.23	-1.1
2,627,121	-		CCNA_02481	0.23	+0.2
2,627,212	+		CCNA_02481	0.26	-0.8
2,627,213	-		CCNA_02481	0.26	+2.5
2,627,229	+		CCNA_02481	0.27	+1.5
2,627,237	-		CCNA_02481	0.27	+0.2
2,627,256	+		CCNA_02481	0.28	+0.5
2,627,263	+		CCNA_02481	0.28	-1.0
2,627,264	+		CCNA_02481	0.28	+1.8
2,627,265	-		CCNA_02481	0.28	-0.8
2,627,284	-		CCNA_02481	0.29	+0.9
2,627,303	+		CCNA_02481	0.30	-1.4
2,627,315	-		CCNA_02481	0.30	-0.5
2,627,365	+		CCNA_02481	0.32	+0.2
2,627,365	+		CCNA_02481	0.32	-0.5
2,627,365	+		CCNA_02481	0.32	-0.1
2,627,371	+		CCNA_02481	0.32	-1.5
2,627,371	-		CCNA_02481	0.32	+0.5
2,627,373	-				+0.2
2,627,373	-		CCNA_02481	0.33	+1.5
2,627,400	+		CCNA_02481	0.34	-0.7
2,627,403	-		CCNA_02481	0.34	+0.5
2,627,403	-		CCNA_02481	0.34	-0.3
2,627,422	-		CCNA_02481	0.34	+2.5
2,627,441	-				+0.9
2,627,449	+		CCNA_02481	0.35	+0.9
2,627,468	+		CCNA_02481	0.36	-0.1
2,627,468	+		CCNA_02481	0.36	-1.3
2,627,476	+		CCNA_02481	0.37	+0.9
2,627,476	-		CCNA_02481	0.37	+2.5
2,627,478	+		CCNA_02481	0.37	-0.8
2,627,478	+		CCNA_02481	0.37	-0.5
2,627,484	-		CCNA_02481	0.37	+0.0
2,627,486	-		CCNA_02481	0.37	+1.5
2,627,486	-		CCNA_02481	0.37	-1.0
2,627,486	-		CCNA_02481	0.37	-1.0
2,627,486	-		CCNA_02481	0.37	+0.0