Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02381

Experiment: PYE with Benzalkonium Chloride 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Benzalkonium Chloride 0.0001 mg/ml
2,522,600	-		CCNA_02379	0.19	+2.5
2,522,606	-		CCNA_02379	0.20	+2.7
2,522,615	+		CCNA_02379	0.22	-1.5
2,522,623	-		CCNA_02379	0.24	+2.4
2,522,629	+		CCNA_02379	0.25	-0.5
2,522,661	-		CCNA_02379	0.32	+2.1
2,522,678	-		CCNA_02379	0.35	+2.1
2,522,792	-		CCNA_02379	0.59	+1.7
2,522,845	+		CCNA_02379	0.70	+1.1
2,522,845	+		CCNA_02379	0.70	-0.4
2,522,845	+		CCNA_02379	0.70	-0.3
2,522,853	-		CCNA_02379	0.72	+2.1
2,522,853	-		CCNA_02379	0.72	+2.1
2,522,853	-		CCNA_02379	0.72	+2.3
2,522,853	-		CCNA_02379	0.72	+2.3
2,522,853	-		CCNA_02379	0.72	+1.2
2,522,853	-		CCNA_02379	0.72	+1.5
2,522,853	-		CCNA_02379	0.72	+1.9
2,522,868	-		CCNA_02379	0.75	+2.2
2,522,878	-		CCNA_02379	0.77	+2.0
2,522,881	+		CCNA_02379	0.78	-0.4
2,522,884	-		CCNA_02379	0.78	+1.9
2,522,903	-		CCNA_02379	0.82	+2.0
2,522,978	-				+1.7
2,523,155	-		CCNA_02380	0.46	+1.4
2,523,551	-				-0.2
2,523,629	-		CCNA_02381	0.16	+0.1
2,523,739	-		CCNA_02381	0.33	-2.4
2,523,772	+		CCNA_02381	0.38	-1.8
2,523,772	+		CCNA_02381	0.38	+0.3
2,523,847	-		CCNA_02381	0.49	+1.5
2,523,852	+		CCNA_02381	0.50	+1.5
2,523,858	-		CCNA_02381	0.51	-2.0
2,523,892	+		CCNA_02381	0.56	+0.2
2,523,907	+		CCNA_02381	0.59	+2.5
2,524,011	+		CCNA_02381	0.75	-0.2
2,524,019	-		CCNA_02381	0.76	-2.3
2,524,035	+		CCNA_02381	0.78	-0.1
2,524,035	+		CCNA_02381	0.78	+1.5
2,524,035	+		CCNA_02381	0.78	+0.5
2,524,035	+		CCNA_02381	0.78	+1.5
2,524,035	+		CCNA_02381	0.78	-0.1
2,524,043	-		CCNA_02381	0.79	+0.1
2,524,043	-		CCNA_02381	0.79	-0.2
2,524,043	-		CCNA_02381	0.79	+1.1
2,524,043	-		CCNA_02381	0.79	-1.8
2,524,043	-		CCNA_02381	0.79	-1.0
2,524,043	-		CCNA_02381	0.79	-1.4
2,524,043	-		CCNA_02381	0.79	-1.1
2,524,045	+		CCNA_02381	0.80	-0.2
2,524,045	+		CCNA_02381	0.80	+0.1
2,524,082	+		CCNA_02381	0.85	-2.1
2,524,145	-				-0.3
2,524,145	-				-0.3
2,524,145	-				-1.1
2,524,170	-				+0.5
2,524,188	-				-0.6
2,524,253	-				-1.9
2,524,287	-		CCNA_02382	0.12	-1.0
2,524,290	+		CCNA_02382	0.12	+0.1
2,524,298	-		CCNA_02382	0.13	+0.5
2,524,299	-		CCNA_02382	0.13	-1.5
2,524,332	+		CCNA_02382	0.17	+1.5
2,524,342	+		CCNA_02382	0.18	+0.8
2,524,376	-		CCNA_02382	0.22	+1.1
2,524,419	+		CCNA_02382	0.27	+0.9
2,524,444	+		CCNA_02382	0.30	+0.5
2,524,509	-		CCNA_02382	0.37	-2.7
2,524,586	-		CCNA_02382	0.45	-1.3
2,524,600	+		CCNA_02382	0.47	-0.9
2,524,602	+		CCNA_02382	0.47	+0.9
2,524,604	-		CCNA_02382	0.47	+0.7
2,524,607	+		CCNA_02382	0.48	-0.1
2,524,610	-		CCNA_02382	0.48	+0.5
2,524,635	-		CCNA_02382	0.51	+1.5
2,524,652	+		CCNA_02382	0.53	+2.5
2,524,656	-		CCNA_02382	0.53	-0.6
2,524,688	+		CCNA_02382	0.57	+1.9
2,524,688	+		CCNA_02382	0.57	+0.1
2,524,688	+		CCNA_02382	0.57	-1.7
2,524,689	-		CCNA_02382	0.57	+2.5
2,524,695	+		CCNA_02382	0.58	-0.2
2,524,696	-		CCNA_02382	0.58	-1.1
2,524,726	+		CCNA_02382	0.61	+0.1
2,524,726	+		CCNA_02382	0.61	+0.9
2,524,734	-		CCNA_02382	0.62	-0.2
2,524,773	-		CCNA_02382	0.66	-0.1
2,524,774	+		CCNA_02382	0.66	-1.8
2,524,777	-		CCNA_02382	0.67	-1.8
2,524,807	+		CCNA_02382	0.70	+1.5
2,524,807	+		CCNA_02382	0.70	-0.1
2,524,815	-		CCNA_02382	0.71	-1.4
2,524,815	-		CCNA_02382	0.71	-0.5
2,524,815	-		CCNA_02382	0.71	+0.1
2,524,839	+		CCNA_02382	0.74	-1.1
2,524,891	+		CCNA_02382	0.79	+2.5
2,524,896	-		CCNA_02382	0.80	-0.1
2,524,958	+		CCNA_02382	0.87	-0.1
2,524,972	-		CCNA_02382	0.89	+1.5
2,524,981	+		CCNA_02382	0.90	-1.5
2,524,981	+		CCNA_02382	0.90	-1.9
2,525,004	+				-1.3
2,525,004	-				+0.5
2,525,012	-				-0.1
2,525,019	+				-0.3
2,525,019	+				-1.0
2,525,019	+				-1.3
2,525,019	+				-1.0
2,525,027	-				+0.5
2,525,027	-				-0.0
2,525,027	-				+1.9
2,525,027	-				-0.7
2,525,027	-				+1.1
2,525,027	-				-1.1
2,525,027	-				-0.2
2,525,029	+				+0.9
2,525,037	-				-1.1
2,525,042	-				+2.0
2,525,069	+				-1.5
2,525,070	-				+0.6
2,525,070	-				-0.7
2,525,075	+				-0.1
2,525,084	+				-0.7
2,525,127	+				+1.9
2,525,146	+				+1.5
2,525,146	+				-1.7
2,525,149	-				+0.6
2,525,154	-				-0.1
2,525,175	-		CCNA_02383	0.12	+0.8