Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02267

Experiment: PYE with Benzalkonium Chloride 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Benzalkonium Chloride 0.0001 mg/ml
2,419,368	+		CCNA_02266	0.17	+0.4
2,419,409	+		CCNA_02266	0.21	+0.9
2,419,527	-		CCNA_02266	0.32	-1.3
2,419,537	-		CCNA_02266	0.33	-1.8
2,419,553	-		CCNA_02266	0.34	-1.3
2,419,553	-		CCNA_02266	0.34	-0.3
2,419,619	-		CCNA_02266	0.40	+0.7
2,419,619	-		CCNA_02266	0.40	-1.5
2,419,625	+		CCNA_02266	0.41	-1.2
2,419,625	+		CCNA_02266	0.41	-0.1
2,419,625	+		CCNA_02266	0.41	+0.3
2,419,630	+		CCNA_02266	0.41	+0.7
2,419,630	+		CCNA_02266	0.41	+2.3
2,419,630	+		CCNA_02266	0.41	-2.0
2,419,633	-		CCNA_02266	0.42	-0.7
2,419,638	-		CCNA_02266	0.42	+0.5
2,419,638	-		CCNA_02266	0.42	-1.3
2,419,700	-		CCNA_02266	0.48	+0.0
2,419,700	-		CCNA_02266	0.48	+0.3
2,419,700	-		CCNA_02266	0.48	-0.9
2,419,700	-		CCNA_02266	0.48	-2.7
2,419,700	-		CCNA_02266	0.48	-0.6
2,419,706	+		CCNA_02266	0.49	-1.9
2,419,706	+		CCNA_02266	0.49	+1.2
2,419,790	+		CCNA_02266	0.56	-0.1
2,419,790	+		CCNA_02266	0.56	-1.6
2,419,798	-		CCNA_02266	0.57	+0.5
2,419,798	-		CCNA_02266	0.57	+0.0
2,419,798	-		CCNA_02266	0.57	+2.3
2,419,811	+		CCNA_02266	0.58	+1.3
2,419,817	-		CCNA_02266	0.59	-0.7
2,419,913	-		CCNA_02266	0.68	-0.3
2,419,945	-		CCNA_02266	0.71	+0.9
2,419,945	-		CCNA_02266	0.71	+0.3
2,419,962	+		CCNA_02266	0.73	-0.5
2,420,046	+		CCNA_02266	0.80	+0.7
2,420,052	+		CCNA_02266	0.81	-0.7
2,420,060	-		CCNA_02266	0.82	+0.7
2,420,072	+		CCNA_02266	0.83	-0.5
2,420,080	-		CCNA_02266	0.84	+0.3
2,420,090	-		CCNA_02266	0.85	+0.9
2,420,106	+		CCNA_02266	0.86	-1.7
2,420,106	+		CCNA_02266	0.86	+0.6
2,420,114	-		CCNA_02266	0.87	+0.3
2,420,114	-		CCNA_02266	0.87	-0.3
2,420,114	-		CCNA_02266	0.87	+2.8
2,420,152	+				+0.5
2,420,153	+				-1.7
2,420,153	+				-0.1
2,420,161	-				-1.2
2,420,161	-				+0.3
2,420,171	-				-1.1
2,420,171	-				-1.5
2,420,171	-				-1.5
2,420,171	-				-1.2
2,420,171	-				-1.1
2,420,178	+				-0.3
2,420,178	+				-0.2
2,420,186	-				-0.3
2,420,186	-				-0.9
2,420,217	-				+0.5
2,420,238	+				-2.1
2,420,241	-				+0.7
2,420,243	+				-0.0
2,420,310	+				-0.1
2,420,320	+				+0.7
2,420,328	-				-1.3
2,420,361	+				-0.1
2,420,361	+				-0.7
2,420,367	-				-0.9
2,420,372	+				-2.2
2,420,372	+				-2.1
2,420,393	+				+0.3
2,420,407	+				+2.3
2,420,415	-				-0.1
2,420,417	+				+0.1
2,420,428	-		CCNA_02267	0.10	+0.3
2,420,454	+		CCNA_02267	0.14	-0.4
2,420,460	+		CCNA_02267	0.15	+1.2
2,420,462	-		CCNA_02267	0.16	-0.9
2,420,462	-		CCNA_02267	0.16	+0.8
2,420,465	+		CCNA_02267	0.16	-2.2
2,420,465	+		CCNA_02267	0.16	+1.0
2,420,473	-		CCNA_02267	0.17	-1.5
2,420,503	+		CCNA_02267	0.22	-0.6
2,420,516	-		CCNA_02267	0.24	-0.3
2,420,516	-		CCNA_02267	0.24	-0.4
2,420,534	+		CCNA_02267	0.27	-2.2
2,420,542	-		CCNA_02267	0.29	-0.9
2,420,542	-		CCNA_02267	0.29	-1.1
2,420,575	+		CCNA_02267	0.34	+1.3
2,420,579	+		CCNA_02267	0.34	+2.3
2,420,598	-		CCNA_02267	0.38	-2.2
2,420,735	-		CCNA_02267	0.59	-1.5
2,420,745	-		CCNA_02267	0.61	-2.3
2,420,809	+		CCNA_02267	0.71	-1.5
2,420,857	-		CCNA_02267	0.79	+0.7
2,420,857	-		CCNA_02267	0.79	+0.3
2,420,886	-		CCNA_02267	0.84	-0.9
2,420,895	+		CCNA_02267	0.85	-1.2
2,420,895	+				+2.3
2,420,903	-		CCNA_02267	0.86	-1.4
2,420,944	-				-1.4
2,420,969	-				+0.5
2,421,008	+		CCNA_02268	0.11	-1.8
2,421,055	+		CCNA_02268	0.18	-0.3
2,421,077	-		CCNA_02268	0.21	+0.7
2,421,091	+		CCNA_02268	0.24	-2.3
2,421,092	+		CCNA_02268	0.24	+1.3
2,421,094	-		CCNA_02268	0.24	-1.1
2,421,100	-		CCNA_02268	0.25	+0.7
2,421,125	+		CCNA_02268	0.29	+0.7
2,421,132	-		CCNA_02268	0.30	-2.5
2,421,139	+		CCNA_02268	0.31	-2.4
2,421,147	-		CCNA_02268	0.32	+1.3
2,421,147	-		CCNA_02268	0.32	-0.5
2,421,147	-		CCNA_02268	0.32	-2.4
2,421,147	-		CCNA_02268	0.32	-0.4
2,421,147	-		CCNA_02268	0.32	+0.5
2,421,147	-		CCNA_02268	0.32	-0.1
2,421,149	+		CCNA_02268	0.33	-0.3
2,421,150	+		CCNA_02268	0.33	-0.3
2,421,157	-		CCNA_02268	0.34	+0.5
2,421,160	+		CCNA_02268	0.34	-2.5
2,421,210	-		CCNA_02268	0.42	+1.3
2,421,221	-		CCNA_02268	0.44	-2.1
2,421,226	-		CCNA_02268	0.44	+1.6
2,421,229	+		CCNA_02268	0.45	-0.3
2,421,236	+		CCNA_02268	0.46	-2.1
2,421,236	+		CCNA_02268	0.46	-0.1
2,421,236	+		CCNA_02268	0.46	-3.1
2,421,236	+		CCNA_02268	0.46	+1.3
2,421,236	+		CCNA_02268	0.46	-1.5
2,421,236	+				+1.3
2,421,236	+		CCNA_02268	0.46	-2.1
2,421,237	-		CCNA_02268	0.46	-0.5
2,421,249	-		CCNA_02268	0.48	-0.7
2,421,249	-		CCNA_02268	0.48	-1.3
2,421,249	-		CCNA_02268	0.48	-1.3
2,421,278	-		CCNA_02268	0.52	+0.7
2,421,321	+		CCNA_02268	0.59	-2.3
2,421,384	+		CCNA_02268	0.69	+0.3
2,421,410	-		CCNA_02268	0.73	-0.8
2,421,447	-		CCNA_02268	0.79	+0.3
2,421,454	+		CCNA_02268	0.80	+0.4
2,421,454	+		CCNA_02268	0.80	-0.8
2,421,462	-		CCNA_02268	0.81	-0.7
2,421,474	+		CCNA_02268	0.83	-0.8
2,421,499	-		CCNA_02268	0.87	+0.1
2,421,505	-		CCNA_02268	0.88	-0.5
2,421,541	-				-1.1
2,421,549	-				+0.3
2,421,554	-				+1.3
2,421,565	-				-0.1
2,421,586	+				-0.9
2,421,586	+				+1.3
2,421,652	+				-0.8
2,421,660	-				-1.6
2,421,660	-				+0.3
2,421,660	-				+0.9
2,421,681	-				-0.7
2,421,703	-				-0.8
2,421,895	-				+1.6
2,421,956	+				-1.8
2,421,956	+				-0.4
2,421,956	+				-1.4
2,421,956	+				-1.7
2,421,956	+				-0.3
2,421,956	+				+0.1
2,421,964	-				-1.4
2,421,964	-				-1.4