Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02240

Experiment: PYE with Benzalkonium Chloride 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Benzalkonium Chloride 0.0001 mg/ml
2,388,713	-		CCNA_02239	0.15	-1.8
2,388,748	-		CCNA_02239	0.18	+0.7
2,388,816	+		CCNA_02239	0.23	-1.8
2,388,924	+		CCNA_02239	0.33	+0.2
2,388,932	-		CCNA_02239	0.33	-1.0
2,388,932	-		CCNA_02239	0.33	+0.7
2,388,932	-		CCNA_02239	0.33	+0.5
2,388,932	-		CCNA_02239	0.33	+0.3
2,388,959	+		CCNA_02239	0.36	-1.4
2,388,967	-		CCNA_02239	0.36	-0.3
2,389,039	+		CCNA_02239	0.42	-1.8
2,389,064	+		CCNA_02239	0.45	-0.9
2,389,064	+		CCNA_02239	0.45	-1.3
2,389,064	+		CCNA_02239	0.45	-0.7
2,389,072	-		CCNA_02239	0.45	-0.5
2,389,149	+		CCNA_02239	0.52	+0.3
2,389,163	+				+1.3
2,389,173	-		CCNA_02239	0.54	-3.1
2,389,178	+		CCNA_02239	0.54	+2.3
2,389,218	-		CCNA_02239	0.58	+0.9
2,389,231	-		CCNA_02239	0.59	-0.3
2,389,252	-		CCNA_02239	0.61	-2.7
2,389,274	-		CCNA_02239	0.62	-2.0
2,389,282	+		CCNA_02239	0.63	-0.5
2,389,282	+		CCNA_02239	0.63	-1.7
2,389,282	+		CCNA_02239	0.63	+0.0
2,389,282	+		CCNA_02239	0.63	-2.1
2,389,283	+		CCNA_02239	0.63	-1.6
2,389,290	-		CCNA_02239	0.64	-2.3
2,389,290	-		CCNA_02239	0.64	-0.2
2,389,290	-		CCNA_02239	0.64	+0.3
2,389,290	-		CCNA_02239	0.64	-0.9
2,389,290	-		CCNA_02239	0.64	+1.5
2,389,290	-		CCNA_02239	0.64	-1.3
2,389,291	-		CCNA_02239	0.64	-0.1
2,389,313	+		CCNA_02239	0.66	+1.3
2,389,313	+		CCNA_02239	0.66	-0.1
2,389,313	+		CCNA_02239	0.66	-1.9
2,389,313	+		CCNA_02239	0.66	-1.8
2,389,313	+		CCNA_02239	0.66	+1.3
2,389,321	-		CCNA_02239	0.66	-0.1
2,389,321	-		CCNA_02239	0.66	+0.5
2,389,321	-		CCNA_02239	0.66	-1.8
2,389,321	-		CCNA_02239	0.66	-1.1
2,389,321	-		CCNA_02239	0.66	-1.4
2,389,321	-		CCNA_02239	0.66	+0.6
2,389,380	+		CCNA_02239	0.71	+0.7
2,389,383	-		CCNA_02239	0.72	-2.1
2,389,403	-		CCNA_02239	0.73	-2.3
2,389,431	+		CCNA_02239	0.76	-2.2
2,389,439	-		CCNA_02239	0.76	-0.2
2,389,439	-		CCNA_02239	0.76	-0.5
2,389,442	+		CCNA_02239	0.77	+0.3
2,389,509	+		CCNA_02239	0.82	-0.9
2,389,509	+		CCNA_02239	0.82	+0.5
2,389,514	+		CCNA_02239	0.83	-0.2
2,389,517	-		CCNA_02239	0.83	-0.4
2,389,524	+		CCNA_02239	0.84	-0.7
2,389,524	+		CCNA_02239	0.84	+0.2
2,389,524	+		CCNA_02239	0.84	-1.5
2,389,524	+		CCNA_02239	0.84	+0.5
2,389,527	-		CCNA_02239	0.84	-2.1
2,389,643	-				-0.5
2,389,646	-				+0.9
2,389,651	-				+0.2
2,389,681	+				+1.6
2,389,694	-				+0.5
2,389,723	+				+0.7
2,389,730	+				-2.1
2,389,760	+				-0.7
2,389,768	+				-1.1
2,389,770	+				-0.5
2,389,783	-				-1.5
2,389,792	+		CCNA_02240	0.10	-0.1
2,389,816	-		CCNA_02240	0.14	+0.0
2,389,857	-		CCNA_02240	0.19	-1.2
2,389,868	-		CCNA_02240	0.20	-0.6
2,389,893	+		CCNA_02240	0.24	+0.3
2,389,901	-				-0.3
2,389,966	+		CCNA_02240	0.33	-1.7
2,389,981	+		CCNA_02240	0.35	+0.3
2,390,045	+		CCNA_02240	0.43	-0.7
2,390,108	-		CCNA_02240	0.51	-1.3
2,390,122	+		CCNA_02240	0.53	-1.0
2,390,130	+		CCNA_02240	0.54	-2.3
2,390,160	-		CCNA_02240	0.58	-0.3
2,390,170	+		CCNA_02240	0.59	-0.4
2,390,178	-		CCNA_02240	0.60	+1.7
2,390,187	-		CCNA_02240	0.61	-0.4
2,390,222	-		CCNA_02240	0.66	+1.7
2,390,271	-		CCNA_02240	0.72	-1.2
2,390,330	+		CCNA_02240	0.80	-0.3
2,390,330	+		CCNA_02240	0.80	-1.8
2,390,400	-		CCNA_02240	0.89	+1.6
2,390,430	-				+0.9
2,390,444	+				-0.7
2,390,460	-				+0.7
2,390,490	-				+1.3
2,390,523	+				-0.5
2,390,535	+		CCNA_02241	0.11	-0.9
2,390,592	+		CCNA_02241	0.23	+1.9
2,390,605	-		CCNA_02241	0.26	+0.4
2,390,649	-		CCNA_02241	0.35	+1.8
2,390,682	-		CCNA_02241	0.42	+0.2
2,390,718	-		CCNA_02241	0.50	+0.5
2,390,737	+		CCNA_02241	0.54	+2.2
2,390,737	-		CCNA_02241	0.54	+0.3
2,390,737	-		CCNA_02241	0.54	+1.3
2,390,756	+		CCNA_02241	0.58	+1.3
2,390,762	-		CCNA_02241	0.59	-0.1
2,390,802	-		CCNA_02241	0.68	+1.1
2,390,856	-		CCNA_02241	0.79	+0.7
2,390,925	-				+1.3
2,390,928	+				-0.3
2,390,928	+				-0.3
2,390,930	+				-2.2
2,390,962	+				-2.1
2,390,980	-				-1.2
2,390,980	-				+2.3
2,391,005	+				-0.1
2,391,005	+				+0.1
2,391,013	-				+0.3
2,391,029	-				-0.5
2,391,052	+				+0.3
2,391,061	-				+2.3
2,391,081	+				-1.6
2,391,117	+				+1.7
2,391,120	-				+3.0
2,391,120	-				+3.0
2,391,122	+				-0.3
2,391,125	-				+2.9
2,391,125	-				+2.8
2,391,144	-				+3.0
2,391,164	+				-0.1
2,391,165	-				+2.8
2,391,165	-				+3.0
2,391,165	-				+3.3
2,391,197	-		CCNA_02242	0.16	+3.1
2,391,252	-		CCNA_02242	0.29	+2.9
2,391,264	-		CCNA_02242	0.32	+3.3
2,391,279	-		CCNA_02242	0.35	+3.0
2,391,286	-		CCNA_02242	0.37	+3.0
2,391,358	-		CCNA_02242	0.53	+3.0
2,391,393	-		CCNA_02242	0.61	+3.0
2,391,455	-		CCNA_02242	0.76	+3.4
2,391,462	-		CCNA_02242	0.77	+3.1