Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02229

Experiment: PYE with Benzalkonium Chloride 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Benzalkonium Chloride 0.0001 mg/ml
2,375,612	+		CCNA_02227	0.58	-1.2
2,375,612	+		CCNA_02227	0.58	+0.3
2,375,661	+		CCNA_02227	0.63	+0.3
2,375,663	+		CCNA_02227	0.63	-1.5
2,375,688	-		CCNA_02227	0.66	+0.5
2,375,703	+		CCNA_02227	0.68	-0.7
2,375,703	+		CCNA_02227	0.68	-0.5
2,375,711	-		CCNA_02227	0.69	+0.1
2,375,771	-		CCNA_02227	0.76	-0.1
2,375,784	+		CCNA_02227	0.77	-1.1
2,375,789	+		CCNA_02227	0.78	+0.7
2,375,797	-		CCNA_02227	0.79	+0.5
2,375,797	-		CCNA_02227	0.79	+0.1
2,375,820	-		CCNA_02227	0.81	+0.1
2,375,825	-		CCNA_02227	0.82	-0.6
2,375,825	-		CCNA_02227	0.82	+0.4
2,375,837	+		CCNA_02227	0.83	-0.3
2,375,847	+		CCNA_02227	0.84	-0.1
2,375,889	-		CCNA_02227	0.89	-0.2
2,375,889	-		CCNA_02227	0.89	+1.0
2,375,889	-		CCNA_02227	0.89	-0.7
2,375,917	+				-0.9
2,375,925	-				+0.7
2,376,038	+				-1.1
2,376,046	-				+0.7
2,376,100	+		CCNA_02228	0.10	-0.1
2,376,105	+		CCNA_02228	0.11	+1.3
2,376,114	+		CCNA_02228	0.14	-0.7
2,376,120	+		CCNA_02228	0.15	+1.0
2,376,145	-		CCNA_02228	0.21	-0.3
2,376,208	+		CCNA_02228	0.35	-0.3
2,376,215	+		CCNA_02228	0.37	-1.1
2,376,216	-		CCNA_02228	0.37	+2.3
2,376,237	+		CCNA_02228	0.42	-0.1
2,376,240	-		CCNA_02228	0.43	+0.7
2,376,255	+		CCNA_02228	0.46	-1.1
2,376,255	+		CCNA_02228	0.46	+0.7
2,376,257	+		CCNA_02228	0.46	-1.5
2,376,272	+		CCNA_02228	0.50	-0.5
2,376,280	-		CCNA_02228	0.52	+0.7
2,376,305	+		CCNA_02228	0.57	+0.1
2,376,313	-		CCNA_02228	0.59	+0.3
2,376,325	+				+1.3
2,376,330	+		CCNA_02228	0.63	-0.5
2,376,330	+		CCNA_02228	0.63	+0.2
2,376,333	-		CCNA_02228	0.64	+0.2
2,376,333	-		CCNA_02228	0.64	-0.5
2,376,345	+		CCNA_02228	0.67	-2.7
2,376,357	+		CCNA_02228	0.69	-0.7
2,376,358	+		CCNA_02228	0.70	+0.7
2,376,366	-		CCNA_02228	0.71	-1.4
2,376,419	+		CCNA_02228	0.84	+0.7
2,376,425	+		CCNA_02228	0.85	-1.5
2,376,427	-		CCNA_02228	0.86	-1.2
2,376,506	+				-0.6
2,376,514	-				-1.4
2,376,519	-				+2.3
2,376,551	-				-0.9
2,376,568	+				-1.3
2,376,574	-				+0.7
2,376,612	-				-0.3
2,376,715	+		CCNA_02229	0.40	+0.1
2,376,728	+		CCNA_02229	0.45	-2.0
2,376,736	-		CCNA_02229	0.48	-0.6
2,376,750	+		CCNA_02229	0.53	+0.4
2,376,833	-		CCNA_02229	0.85	-1.2
2,376,932	+				-2.3
2,376,953	-				+1.5
2,376,953	-				+2.1
2,376,960	+				+1.7
2,376,963	-				+2.3
2,376,963	-				-1.9
2,377,001	+		CCNA_02230	0.14	-0.2
2,377,015	-		CCNA_02230	0.15	-0.7
2,377,032	-		CCNA_02230	0.17	+0.7
2,377,060	+		CCNA_02230	0.20	+2.3
2,377,090	-		CCNA_02230	0.23	-0.1
2,377,090	-		CCNA_02230	0.23	-1.3
2,377,226	-		CCNA_02230	0.37	-0.7
2,377,236	-		CCNA_02230	0.38	-0.3
2,377,295	-		CCNA_02230	0.44	+0.6
2,377,317	+		CCNA_02230	0.47	-0.1
2,377,324	-		CCNA_02230	0.47	-1.5
2,377,324	-		CCNA_02230	0.47	-0.1
2,377,364	+		CCNA_02230	0.52	+0.4
2,377,437	+		CCNA_02230	0.59	-0.3
2,377,437	+		CCNA_02230	0.59	-1.1
2,377,482	+		CCNA_02230	0.64	-0.2
2,377,521	-		CCNA_02230	0.68	+0.0
2,377,521	-		CCNA_02230	0.68	+0.3
2,377,530	+		CCNA_02230	0.69	-0.7
2,377,551	-		CCNA_02230	0.71	+0.3
2,377,551	-		CCNA_02230	0.71	+2.3
2,377,551	-		CCNA_02230	0.71	-0.5
2,377,551	-		CCNA_02230	0.71	-0.7
2,377,584	-		CCNA_02230	0.75	-0.2
2,377,639	+		CCNA_02230	0.80	+0.7
2,377,647	-		CCNA_02230	0.81	+0.0
2,377,647	-		CCNA_02230	0.81	+1.7
2,377,648	+		CCNA_02230	0.81	+0.7
2,377,678	+		CCNA_02230	0.84	+1.3
2,377,683	+		CCNA_02230	0.85	-2.1
2,377,686	-		CCNA_02230	0.85	-1.1
2,377,691	-		CCNA_02230	0.86	-1.4
2,377,691	-		CCNA_02230	0.86	+0.1
2,377,691	-		CCNA_02230	0.86	-1.8
2,377,710	+		CCNA_02230	0.88	-1.3
2,377,710	+		CCNA_02230	0.88	-0.3
2,377,718	-		CCNA_02230	0.89	-0.2
2,377,718	-		CCNA_02230	0.89	+1.5
2,377,756	-				-0.5
2,377,756	-				+0.9
2,377,795	+				-0.3
2,377,830	+				+1.3
2,377,834	+				+1.7
2,377,843	-				+0.3
2,377,843	-				+1.3
2,377,854	+				+0.7