Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02160

Experiment: PYE with Benzalkonium Chloride 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Benzalkonium Chloride 0.0001 mg/ml
2,314,607	+		CCNA_02158	0.67	+0.4
2,314,619	-		CCNA_02158	0.68	+0.2
2,314,639	+		CCNA_02158	0.70	-0.9
2,314,639	+		CCNA_02158	0.70	-0.7
2,314,639	+		CCNA_02158	0.70	-0.9
2,314,639	+		CCNA_02158	0.70	-1.7
2,314,639	+				+0.7
2,314,647	-		CCNA_02158	0.71	+0.3
2,314,650	+		CCNA_02158	0.71	-1.7
2,314,650	+		CCNA_02158	0.71	-0.7
2,314,658	-		CCNA_02158	0.72	-0.3
2,314,670	+		CCNA_02158	0.73	-0.6
2,314,670	+		CCNA_02158	0.73	-1.3
2,314,673	-		CCNA_02158	0.74	-0.2
2,314,673	-		CCNA_02158	0.74	+2.8
2,314,673	-		CCNA_02158	0.74	-0.1
2,314,673	-		CCNA_02158	0.74	+1.2
2,314,675	+		CCNA_02158	0.74	-1.1
2,314,678	-		CCNA_02158	0.74	-0.0
2,314,678	-		CCNA_02158	0.74	-0.2
2,314,683	-		CCNA_02158	0.75	-0.6
2,314,683	-		CCNA_02158	0.75	-0.4
2,314,689	+		CCNA_02158	0.75	-0.9
2,314,693	+		CCNA_02158	0.76	-0.1
2,314,695	-		CCNA_02158	0.76	-0.3
2,314,695	-		CCNA_02158	0.76	-0.7
2,314,741	-		CCNA_02158	0.81	+0.7
2,314,744	+		CCNA_02158	0.81	+1.3
2,314,747	-		CCNA_02158	0.81	+1.3
2,314,752	-		CCNA_02158	0.82	+0.4
2,314,765	-		CCNA_02158	0.83	-1.4
2,314,771	-		CCNA_02158	0.84	-1.7
2,314,805	+		CCNA_02158	0.87	+0.3
2,314,805	+		CCNA_02158	0.87	-0.3
2,314,805	+		CCNA_02158	0.87	-0.6
2,314,806	-		CCNA_02158	0.88	-1.3
2,314,813	-		CCNA_02158	0.88	+0.7
2,314,813	-		CCNA_02158	0.88	+0.7
2,314,813	-		CCNA_02158	0.88	+0.5
2,314,852	-				+1.3
2,314,902	+				-0.1
2,314,902	+				-0.3
2,314,991	-		CCNA_02159	0.13	+0.1
2,315,011	-		CCNA_02159	0.16	-1.9
2,315,011	-		CCNA_02159	0.16	+0.7
2,315,011	-		CCNA_02159	0.16	+0.7
2,315,011	-		CCNA_02159	0.16	-0.9
2,315,016	-		CCNA_02159	0.17	-1.1
2,315,034	+		CCNA_02159	0.20	+3.3
2,315,068	-		CCNA_02159	0.26	+1.7
2,315,070	+		CCNA_02159	0.27	+2.3
2,315,091	+		CCNA_02159	0.31	+0.7
2,315,099	-		CCNA_02159	0.32	-1.2
2,315,099	-		CCNA_02159	0.32	-1.4
2,315,174	-		CCNA_02159	0.46	+1.3
2,315,190	+		CCNA_02159	0.48	-1.9
2,315,198	+		CCNA_02159	0.50	-0.7
2,315,198	+		CCNA_02159	0.50	+0.7
2,315,198	-		CCNA_02159	0.50	-1.5
2,315,206	-		CCNA_02159	0.51	-0.5
2,315,206	-		CCNA_02159	0.51	-1.3
2,315,206	-		CCNA_02159	0.51	-0.1
2,315,219	-		CCNA_02159	0.54	-0.2
2,315,221	-		CCNA_02159	0.54	-0.2
2,315,245	-		CCNA_02159	0.58	-0.7
2,315,318	-		CCNA_02159	0.72	+1.1
2,315,354	-		CCNA_02159	0.78	-1.9
2,315,383	+		CCNA_02159	0.83	-1.4
2,315,388	+		CCNA_02159	0.84	-1.3
2,315,388	+		CCNA_02159	0.84	+0.3
2,315,396	-		CCNA_02159	0.86	-1.7
2,315,396	-		CCNA_02159	0.86	-1.1
2,315,396	-		CCNA_02159	0.86	-0.6
2,315,396	-		CCNA_02159	0.86	-0.1
2,315,396	-		CCNA_02159	0.86	-0.9
2,315,396	-		CCNA_02159	0.86	-0.1
2,315,396	-		CCNA_02159	0.86	-0.3
2,315,396	-		CCNA_02159	0.86	-1.3
2,315,400	+		CCNA_02159	0.86	-0.2
2,315,425	-				+0.0
2,315,432	+				+1.7
2,315,588	+				-0.6
2,315,633	+				+0.3
2,315,641	-		CCNA_02160	0.11	+0.2
2,315,641	-		CCNA_02160	0.11	-0.9
2,315,667	-		CCNA_02160	0.16	-0.3
2,315,690	+		CCNA_02160	0.20	-1.5
2,315,744	-		CCNA_02160	0.31	-2.6
2,315,801	-		CCNA_02160	0.42	-0.4
2,315,827	-		CCNA_02160	0.47	-0.3
2,315,844	-		CCNA_02160	0.51	-0.9
2,315,948	+				+1.3
2,316,005	+		CCNA_02160	0.82	-0.5
2,316,024	+		CCNA_02160	0.86	-2.1
2,316,041	+		CCNA_02160	0.89	-0.7
2,316,046	+				+1.7
2,316,051	+				+2.3
2,316,051	-				-0.5
2,316,054	-				-0.1
2,316,054	-				-0.3
2,316,068	+				+1.3
2,316,417	+		CCNA_02161	0.28	+1.5
2,316,441	-		CCNA_02161	0.32	+0.5
2,316,449	-		CCNA_02161	0.33	+0.3
2,316,451	+		CCNA_02161	0.33	+2.4
2,316,490	+		CCNA_02161	0.39	+0.9
2,316,519	+		CCNA_02161	0.44	+1.2
2,316,553	-		CCNA_02161	0.49	-0.9
2,316,616	-		CCNA_02161	0.58	+2.3
2,316,653	+		CCNA_02161	0.64	+2.3
2,316,711	+		CCNA_02161	0.72	+1.3
2,316,711	+		CCNA_02161	0.72	+0.9
2,316,711	+		CCNA_02161	0.72	+1.4
2,316,719	-		CCNA_02161	0.74	+0.3
2,316,719	-		CCNA_02161	0.74	+2.3
2,316,741	-		CCNA_02161	0.77	+0.3
2,316,744	-		CCNA_02161	0.77	-0.1
2,316,748	+				+1.3
2,316,931	+				+0.4
2,316,944	+				-1.6
2,316,944	+				+1.2
2,316,952	-				-1.6
2,316,977	+				-0.9
2,316,977	+				+0.9
2,316,977	+				-0.1
2,316,992	+				+3.3
2,317,011	-				-1.4
2,317,011	-				-2.9
2,317,021	+				-0.1
2,317,021	+				-0.7
2,317,021	+				+0.3
2,317,021	+				-0.9
2,317,029	-				-1.5
2,317,029	-				+0.2
2,317,040	+				-1.1