Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02117

Experiment: PYE with Benzalkonium Chloride 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Benzalkonium Chloride 0.0001 mg/ml
2,265,708	+				-1.6
2,265,715	-				+0.6
2,265,726	+				+0.6
2,265,732	-				-0.4
2,265,739	+				+1.8
2,265,739	+				-0.7
2,265,741	+				+0.4
2,265,747	-				+2.2
2,265,753	+				-0.1
2,265,761	-				-0.7
2,265,855	+		CCNA_02116	0.16	-0.8
2,265,867	+		CCNA_02116	0.17	-0.6
2,265,892	-		CCNA_02116	0.21	-0.8
2,265,892	-		CCNA_02116	0.21	-1.2
2,265,922	-		CCNA_02116	0.24	+2.2
2,265,972	-		CCNA_02116	0.31	-0.1
2,265,976	-		CCNA_02116	0.31	-1.9
2,266,010	+		CCNA_02116	0.35	-0.1
2,266,018	-		CCNA_02116	0.36	-1.5
2,266,032	-		CCNA_02116	0.38	-0.1
2,266,032	-		CCNA_02116	0.38	-2.2
2,266,032	-		CCNA_02116	0.38	-2.0
2,266,041	-		CCNA_02116	0.39	+0.6
2,266,079	-		CCNA_02116	0.44	+0.2
2,266,084	-		CCNA_02116	0.45	-1.7
2,266,143	+		CCNA_02116	0.52	-0.6
2,266,151	-		CCNA_02116	0.53	-1.5
2,266,151	-		CCNA_02116	0.53	-0.2
2,266,151	-		CCNA_02116	0.53	-1.7
2,266,151	-		CCNA_02116	0.53	-1.6
2,266,166	-		CCNA_02116	0.55	-1.2
2,266,266	-		CCNA_02116	0.67	-0.1
2,266,344	+		CCNA_02116	0.77	+2.2
2,266,348	+		CCNA_02116	0.78	-0.6
2,266,352	-		CCNA_02116	0.78	-1.7
2,266,382	-		CCNA_02116	0.82	-1.0
2,266,388	-		CCNA_02116	0.83	+2.2
2,266,430	+		CCNA_02116	0.88	-1.5
2,266,711	-		CCNA_02117	0.12	+0.6
2,266,717	+		CCNA_02117	0.13	-1.2
2,266,720	-		CCNA_02117	0.13	-1.2
2,266,725	-		CCNA_02117	0.14	-0.4
2,266,790	-		CCNA_02117	0.25	-1.0
2,266,847	+		CCNA_02117	0.35	+1.5
2,266,847	+		CCNA_02117	0.35	-2.1
2,266,855	-		CCNA_02117	0.36	-2.2
2,266,910	+		CCNA_02117	0.45	-0.1
2,266,934	+				+2.2
2,266,942	-		CCNA_02117	0.51	-1.0
2,267,027	-		CCNA_02117	0.65	-0.6
2,267,111	-		CCNA_02117	0.79	+0.2
2,267,113	+		CCNA_02117	0.79	+0.6
2,267,130	+		CCNA_02117	0.82	+0.6
2,267,130	+		CCNA_02117	0.82	-3.1
2,267,130	+		CCNA_02117	0.82	-0.4
2,267,138	-		CCNA_02117	0.83	-0.4
2,267,138	-		CCNA_02117	0.83	-1.7
2,267,138	-		CCNA_02117	0.83	+1.0
2,267,149	+		CCNA_02117	0.85	-2.0
2,267,157	-		CCNA_02117	0.87	-1.2
2,267,157	-		CCNA_02117	0.87	-0.2
2,267,162	+		CCNA_02117	0.87	+0.6
2,267,163	+		CCNA_02117	0.88	-1.0
2,267,164	-		CCNA_02117	0.88	-1.4
2,267,165	-		CCNA_02117	0.88	-0.1
2,267,165	-		CCNA_02117	0.88	-1.4
2,267,170	-		CCNA_02117	0.89	-1.0
2,267,206	-				-1.5
2,267,236	-				-0.1
2,267,324	-				+0.4
2,267,381	+				+0.2
2,267,522	+				-0.4
2,267,537	-				+0.2
2,267,557	+		CCNA_02118	0.11	-2.4
2,267,565	-		CCNA_02118	0.11	-0.1
2,267,565	-		CCNA_02118	0.11	+0.2
2,267,578	-		CCNA_02118	0.12	-1.4
2,267,601	-		CCNA_02118	0.13	-0.1
2,267,630	+		CCNA_02118	0.14	-0.4
2,267,639	-		CCNA_02118	0.15	+0.4
2,267,666	+		CCNA_02118	0.16	-0.1
2,267,712	-		CCNA_02118	0.18	+1.7
2,267,712	-		CCNA_02118	0.18	-0.5
2,267,760	-		CCNA_02118	0.20	+1.2
2,267,778	-		CCNA_02118	0.21	-0.8
2,267,788	+		CCNA_02118	0.21	+2.2
2,267,796	-		CCNA_02118	0.22	+0.6
2,267,796	-		CCNA_02118	0.22	+0.0
2,267,796	-		CCNA_02118	0.22	+0.6
2,267,806	+		CCNA_02118	0.22	+0.6
2,267,806	-		CCNA_02118	0.22	+0.2
2,267,809	+		CCNA_02118	0.22	-2.3
2,267,879	+		CCNA_02118	0.26	-1.0
2,267,887	-		CCNA_02118	0.26	-0.4
2,267,939	-		CCNA_02118	0.28	+0.2
2,267,970	+		CCNA_02118	0.30	-0.1
2,267,996	+		CCNA_02118	0.31	+0.2
2,268,041	-		CCNA_02118	0.33	+0.9
2,268,041	-		CCNA_02118	0.33	-0.8
2,268,041	-		CCNA_02118	0.33	+1.6
2,268,046	-		CCNA_02118	0.33	-0.3
2,268,061	-		CCNA_02118	0.34	+0.9
2,268,104	+		CCNA_02118	0.36	-0.4
2,268,124	-		CCNA_02118	0.37	+1.0
2,268,140	-		CCNA_02118	0.38	-0.2
2,268,188	-		CCNA_02118	0.40	+1.4
2,268,231	-		CCNA_02118	0.42	+0.6
2,268,231	-		CCNA_02118	0.42	-0.3
2,268,231	-		CCNA_02118	0.42	-0.2