Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02115

Experiment: PYE with Benzalkonium Chloride 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Benzalkonium Chloride 0.0001 mg/ml
2,262,988	+		CCNA_02113	0.65	-2.0
2,262,994	+		CCNA_02113	0.66	-0.2
2,263,051	-		CCNA_02113	0.75	+0.2
2,263,087	-		CCNA_02113	0.80	-1.1
2,263,172	+				-1.7
2,263,202	-				-0.1
2,263,222	+				+0.4
2,263,236	+				-0.5
2,263,236	+				+2.5
2,263,237	+				-0.1
2,263,237	+				-1.4
2,263,244	-				-0.4
2,263,244	-				-0.4
2,263,247	+				+0.0
2,263,255	-				+0.6
2,263,309	-				+0.8
2,263,309	-				-0.5
2,263,314	+				-0.8
2,263,324	-				+0.4
2,263,349	+				+1.2
2,263,423	+		CCNA_02114	0.49	-0.8
2,263,423	+		CCNA_02114	0.49	-1.4
2,263,431	-		CCNA_02114	0.54	-0.1
2,263,500	+				-3.0
2,263,517	+				+0.2
2,263,524	+				-2.4
2,263,525	-				+2.2
2,263,538	+				-0.9
2,263,541	-				+0.6
2,263,593	-				-0.9
2,263,645	+				-0.2
2,263,653	+				-0.8
2,263,666	-				+1.7
2,263,749	+				-0.2
2,263,749	+				-2.1
2,263,749	+				-1.1
2,263,749	+				+0.6
2,263,749	+				+1.2
2,263,757	-				+0.8
2,263,757	-				-0.7
2,263,757	-				-0.2
2,263,757	-				-2.3
2,263,769	-				-1.4
2,263,780	+				-0.9
2,263,903	+				-1.2
2,263,944	+				+0.2
2,263,962	-				-1.2
2,263,992	-				+0.9
2,264,159	-		CCNA_02115	0.12	+0.8
2,264,178	+		CCNA_02115	0.13	-1.1
2,264,223	+		CCNA_02115	0.16	-1.1
2,264,253	-		CCNA_02115	0.17	-0.8
2,264,277	+		CCNA_02115	0.19	-0.4
2,264,403	+		CCNA_02115	0.27	-1.0
2,264,446	-		CCNA_02115	0.29	-1.1
2,264,553	+		CCNA_02115	0.36	-0.2
2,264,556	-		CCNA_02115	0.36	+2.2
2,264,560	+		CCNA_02115	0.36	-0.1
2,264,560	+		CCNA_02115	0.36	+0.6
2,264,561	-		CCNA_02115	0.36	+2.2
2,264,561	-		CCNA_02115	0.36	-0.6
2,264,619	+		CCNA_02115	0.40	-0.4
2,264,672	-		CCNA_02115	0.43	-0.6
2,264,720	-		CCNA_02115	0.46	+1.2
2,264,727	+		CCNA_02115	0.46	+1.2
2,264,728	+		CCNA_02115	0.47	-0.7
2,264,731	-		CCNA_02115	0.47	-1.2
2,264,731	-		CCNA_02115	0.47	-0.6
2,264,736	-		CCNA_02115	0.47	-1.0
2,264,768	-		CCNA_02115	0.49	+0.6
2,264,880	-		CCNA_02115	0.56	+1.2
2,264,945	+		CCNA_02115	0.60	-1.1
2,264,975	-		CCNA_02115	0.62	-2.3
2,264,982	-		CCNA_02115	0.62	-1.0
2,264,982	-		CCNA_02115	0.62	-0.6
2,264,982	-		CCNA_02115	0.62	+1.2
2,264,992	-		CCNA_02115	0.63	-0.1
2,265,001	-		CCNA_02115	0.63	-1.7
2,265,001	-		CCNA_02115	0.63	+0.2
2,265,031	+		CCNA_02115	0.65	+0.2
2,265,052	+		CCNA_02115	0.66	+2.2
2,265,071	+		CCNA_02115	0.68	+2.2
2,265,134	+		CCNA_02115	0.71	-2.2
2,265,134	+		CCNA_02115	0.71	-2.1
2,265,134	-		CCNA_02115	0.71	-0.7
2,265,201	+		CCNA_02115	0.75	-0.1
2,265,201	+		CCNA_02115	0.75	+0.9
2,265,209	-		CCNA_02115	0.76	-0.8
2,265,243	+		CCNA_02115	0.78	-2.0
2,265,254	+		CCNA_02115	0.79	-0.6
2,265,254	+		CCNA_02115	0.79	+2.2
2,265,299	+		CCNA_02115	0.81	-0.1
2,265,307	-		CCNA_02115	0.82	+2.2
2,265,321	+		CCNA_02115	0.83	-0.6
2,265,328	-		CCNA_02115	0.83	-0.1
2,265,329	-		CCNA_02115	0.83	-1.7
2,265,332	+		CCNA_02115	0.84	-1.8
2,265,337	+		CCNA_02115	0.84	+1.2
2,265,337	+		CCNA_02115	0.84	+0.8
2,265,337	+		CCNA_02115	0.84	+1.2
2,265,345	-		CCNA_02115	0.84	+0.6
2,265,378	+		CCNA_02115	0.86	-0.5
2,265,472	+				+0.2
2,265,480	-				+2.2
2,265,557	-				-0.6
2,265,632	-				+0.2
2,265,708	+				-1.6
2,265,715	-				+0.6
2,265,726	+				+0.6
2,265,732	-				-0.4
2,265,739	+				+1.8
2,265,739	+				-0.7
2,265,741	+				+0.4
2,265,747	-				+2.2
2,265,753	+				-0.1
2,265,761	-				-0.7
2,265,855	+		CCNA_02116	0.16	-0.8
2,265,867	+		CCNA_02116	0.17	-0.6
2,265,892	-		CCNA_02116	0.21	-0.8
2,265,892	-		CCNA_02116	0.21	-1.2
2,265,922	-		CCNA_02116	0.24	+2.2
2,265,972	-		CCNA_02116	0.31	-0.1
2,265,976	-		CCNA_02116	0.31	-1.9
2,266,010	+		CCNA_02116	0.35	-0.1
2,266,018	-		CCNA_02116	0.36	-1.5
2,266,032	-		CCNA_02116	0.38	-0.1
2,266,032	-		CCNA_02116	0.38	-2.2
2,266,032	-		CCNA_02116	0.38	-2.0
2,266,041	-		CCNA_02116	0.39	+0.6
2,266,079	-		CCNA_02116	0.44	+0.2
2,266,084	-		CCNA_02116	0.45	-1.7
2,266,143	+		CCNA_02116	0.52	-0.6
2,266,151	-		CCNA_02116	0.53	-1.5
2,266,151	-		CCNA_02116	0.53	-0.2
2,266,151	-		CCNA_02116	0.53	-1.7
2,266,151	-		CCNA_02116	0.53	-1.6
2,266,166	-		CCNA_02116	0.55	-1.2
2,266,266	-		CCNA_02116	0.67	-0.1
2,266,344	+		CCNA_02116	0.77	+2.2
2,266,348	+		CCNA_02116	0.78	-0.6
2,266,352	-		CCNA_02116	0.78	-1.7
2,266,382	-		CCNA_02116	0.82	-1.0
2,266,388	-		CCNA_02116	0.83	+2.2
2,266,430	+		CCNA_02116	0.88	-1.5