Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01902

Experiment: PYE with Benzalkonium Chloride 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Benzalkonium Chloride 0.0001 mg/ml
2,043,938	-		CCNA_01901	0.57	-2.1
2,043,993	+		CCNA_01901	0.62	+1.5
2,044,006	-		CCNA_01901	0.64	-1.5
2,044,123	-		CCNA_01901	0.75	-1.9
2,044,173	+		CCNA_01901	0.81	+1.5
2,044,206	+		CCNA_01901	0.84	+1.5
2,044,288	-				-0.7
2,044,317	+				+0.1
2,044,325	-				+0.9
2,044,332	-				-0.3
2,044,332	-				-2.3
2,044,350	-				-0.3
2,044,366	-				-0.3
2,044,367	-				+0.6
2,044,391	-				+2.7
2,044,392	+				-2.3
2,044,392	-				-1.2
2,044,464	+				-0.9
2,044,464	+				-1.6
2,044,641	+				-0.7
2,044,649	-				+0.9
2,044,697	-				-0.5
2,044,752	-				-0.5
2,044,805	+				+1.5
2,044,820	-				+1.1
2,044,820	-				-0.3
2,044,949	-				+2.5
2,044,970	+				+1.5
2,044,970	+				+0.9
2,044,970	+				-1.6
2,044,978	-		CCNA_01902	0.10	-1.2
2,044,996	-		CCNA_01902	0.14	+0.5
2,045,004	-		CCNA_01902	0.16	+0.1
2,045,059	-		CCNA_01902	0.27	+1.5
2,045,059	-		CCNA_01902	0.27	-1.1
2,045,082	+		CCNA_01902	0.32	-0.1
2,045,085	+		CCNA_01902	0.32	-0.5
2,045,090	-		CCNA_01902	0.33	+0.5
2,045,120	+		CCNA_01902	0.39	+0.2
2,045,128	-		CCNA_01902	0.41	-1.4
2,045,128	-		CCNA_01902	0.41	+1.1
2,045,128	-		CCNA_01902	0.41	-0.3
2,045,128	-		CCNA_01902	0.41	-1.1
2,045,130	+		CCNA_01902	0.42	-2.1
2,045,173	-		CCNA_01902	0.50	+0.7
2,045,173	-		CCNA_01902	0.50	-1.2
2,045,189	+		CCNA_01902	0.54	-0.5
2,045,189	+		CCNA_01902	0.54	-0.4
2,045,189	+		CCNA_01902	0.54	-1.0
2,045,255	-		CCNA_01902	0.67	-0.1
2,045,265	-		CCNA_01902	0.69	-1.1
2,045,270	-		CCNA_01902	0.70	+0.1
2,045,289	-		CCNA_01902	0.74	-1.0
2,045,300	+		CCNA_01902	0.76	-0.8
2,045,325	+		CCNA_01902	0.81	-0.1
2,045,333	-		CCNA_01902	0.83	+2.5
2,045,346	-		CCNA_01902	0.86	-1.0
2,045,359	+		CCNA_01902	0.88	-0.1
2,045,394	-				+0.1
2,045,424	+				+0.9
2,045,424	+				-0.3
2,045,437	-				-0.1
2,045,437	-				-0.1
2,045,444	+				-0.2
2,045,444	+				+1.4
2,045,445	-				-1.1
2,045,445	-				+1.5
2,045,452	-				-0.3
2,045,452	-				-0.9
2,045,454	+				-0.6
2,045,462	-				+0.9
2,045,467	+				+0.7
2,045,475	-				+1.5
2,045,516	-		CCNA_01903	0.12	-1.0
2,045,535	-		CCNA_01903	0.15	-0.1
2,045,637	+		CCNA_01903	0.27	-1.3
2,045,672	+		CCNA_01903	0.31	-0.3
2,045,748	-		CCNA_01903	0.40	-0.9
2,045,769	+		CCNA_01903	0.42	+2.5
2,045,781	+		CCNA_01903	0.44	+0.5
2,045,781	+		CCNA_01903	0.44	+0.9
2,045,791	+		CCNA_01903	0.45	+0.6
2,045,794	-		CCNA_01903	0.45	-0.3
2,045,796	+		CCNA_01903	0.46	-1.7
2,045,799	-		CCNA_01903	0.46	-0.3
2,045,799	-		CCNA_01903	0.46	-1.0
2,045,804	-		CCNA_01903	0.47	-0.1
2,045,836	+		CCNA_01903	0.50	+0.9
2,045,843	-		CCNA_01903	0.51	-1.4
2,045,843	-		CCNA_01903	0.51	+0.2
2,045,854	-		CCNA_01903	0.53	-2.1
2,045,875	+		CCNA_01903	0.55	+0.5
2,045,889	-		CCNA_01903	0.57	-2.7
2,045,902	-		CCNA_01903	0.58	+1.5
2,045,994	+		CCNA_01903	0.69	+2.5
2,046,002	-		CCNA_01903	0.70	-0.4
2,046,020	+		CCNA_01903	0.72	+2.3
2,046,033	-		CCNA_01903	0.74	-0.9
2,046,054	-		CCNA_01903	0.76	+2.5
2,046,054	-		CCNA_01903	0.76	-0.5
2,046,069	+		CCNA_01903	0.78	-0.3
2,046,072	-		CCNA_01903	0.79	+0.5
2,046,089	-		CCNA_01903	0.81	-0.5
2,046,089	-		CCNA_01903	0.81	-0.7
2,046,089	-		CCNA_01903	0.81	+2.5
2,046,127	-		CCNA_01903	0.85	+0.3
2,046,168	-				-1.6
2,046,175	+				+0.1
2,046,175	+				+0.1
2,046,183	-				-1.4
2,046,227	-				+0.5
2,046,259	+				-0.1
2,046,259	+				-0.7
2,046,267	-				-0.3
2,046,280	+				+0.9
2,046,331	-		CCNA_01904	0.11	-0.6
2,046,331	-		CCNA_01904	0.11	+0.9
2,046,331	-		CCNA_01904	0.11	+2.5
2,046,339	+		CCNA_01904	0.12	-0.1
2,046,347	-		CCNA_01904	0.14	-1.4
2,046,350	+		CCNA_01904	0.14	-1.3
2,046,358	-		CCNA_01904	0.15	+0.5
2,046,360	+		CCNA_01904	0.16	-0.3
2,046,379	-		CCNA_01904	0.19	+1.3
2,046,381	+		CCNA_01904	0.19	-1.8
2,046,403	+		CCNA_01904	0.22	-0.3