Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01882

Experiment: PYE with Benzalkonium Chloride 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Benzalkonium Chloride 0.0001 mg/ml
2,020,238	+		CCNA_01880	0.62	-0.3
2,020,246	-		CCNA_01880	0.63	+0.3
2,020,262	+		CCNA_01880	0.65	-0.3
2,020,386	+		CCNA_01880	0.81	-1.1
2,020,388	+		CCNA_01880	0.82	-0.3
2,020,400	-		CCNA_01880	0.83	-0.5
2,020,457	-				-1.0
2,020,478	+				+0.9
2,020,517	+				-1.4
2,020,525	-				+0.5
2,020,526	-				+0.5
2,020,536	-				-0.3
2,020,577	+				+0.2
2,020,577	+				+0.2
2,020,577	+				-0.1
2,020,585	-		CCNA_01881	0.10	-0.0
2,020,585	-		CCNA_01881	0.10	+0.9
2,020,603	-		CCNA_01881	0.13	+1.5
2,020,618	-		CCNA_01881	0.15	-0.1
2,020,645	-		CCNA_01881	0.20	-0.1
2,020,650	-		CCNA_01881	0.20	+0.9
2,020,766	-		CCNA_01881	0.38	-1.4
2,020,775	+		CCNA_01881	0.40	-0.7
2,020,775	+		CCNA_01881	0.40	+0.5
2,020,776	-		CCNA_01881	0.40	+0.9
2,020,776	-		CCNA_01881	0.40	-0.7
2,020,776	-		CCNA_01881	0.40	-1.4
2,020,795	-		CCNA_01881	0.43	+2.5
2,020,828	-		CCNA_01881	0.48	-0.4
2,020,895	-		CCNA_01881	0.59	+0.5
2,020,934	+		CCNA_01881	0.65	-0.8
2,020,955	+		CCNA_01881	0.68	+0.9
2,020,956	+		CCNA_01881	0.68	-0.8
2,020,956	+		CCNA_01881	0.68	-0.3
2,020,963	-		CCNA_01881	0.69	-0.5
2,020,963	-		CCNA_01881	0.69	-0.2
2,020,963	-		CCNA_01881	0.69	-0.5
2,020,964	-		CCNA_01881	0.69	+0.2
2,020,966	+		CCNA_01881	0.70	+1.2
2,020,967	+		CCNA_01881	0.70	-0.5
2,020,982	+		CCNA_01881	0.72	-0.8
2,020,982	+		CCNA_01881	0.72	-0.3
2,020,997	-		CCNA_01881	0.75	-0.7
2,021,001	+		CCNA_01881	0.75	-1.8
2,021,009	-		CCNA_01881	0.77	+0.5
2,021,019	+		CCNA_01881	0.78	+0.2
2,021,060	+		CCNA_01881	0.85	-2.7
2,021,099	+				+0.2
2,021,107	-				+0.9
2,021,137	+				+0.8
2,021,152	-				-1.3
2,021,189	+				+2.5
2,021,225	+				+0.5
2,021,235	+				-0.8
2,021,238	+				-0.3
2,021,238	+				-0.5
2,021,273	+		CCNA_01882	0.13	-0.6
2,021,320	+		CCNA_01882	0.19	-2.1
2,021,335	+		CCNA_01882	0.20	-1.9
2,021,335	+		CCNA_01882	0.20	+0.5
2,021,335	+		CCNA_01882	0.20	-0.1
2,021,335	+		CCNA_01882	0.20	-0.1
2,021,335	+		CCNA_01882	0.20	-0.5
2,021,335	+		CCNA_01882	0.20	-0.1
2,021,343	-		CCNA_01882	0.21	-1.2
2,021,435	+		CCNA_01882	0.32	+1.1
2,021,436	-		CCNA_01882	0.32	+1.2
2,021,436	-		CCNA_01882	0.32	+0.5
2,021,443	-		CCNA_01882	0.33	-0.7
2,021,443	-		CCNA_01882	0.33	+0.5
2,021,555	-		CCNA_01882	0.45	-1.4
2,021,597	-		CCNA_01882	0.50	-1.7
2,021,637	+		CCNA_01882	0.55	+0.9
2,021,651	+		CCNA_01882	0.56	-0.7
2,021,655	+		CCNA_01882	0.57	-1.4
2,021,686	-		CCNA_01882	0.60	-1.0
2,021,686	-		CCNA_01882	0.60	-1.2
2,021,699	-		CCNA_01882	0.62	-0.5
2,021,734	+		CCNA_01882	0.66	-0.8
2,021,734	+		CCNA_01882	0.66	-2.5
2,021,734	+		CCNA_01882	0.66	+0.2
2,021,742	-		CCNA_01882	0.67	+1.5
2,021,742	-		CCNA_01882	0.67	-0.7
2,021,786	+		CCNA_01882	0.72	+0.5
2,021,796	+		CCNA_01882	0.73	-1.4
2,021,812	-		CCNA_01882	0.74	-0.1
2,021,859	-		CCNA_01882	0.80	+0.9
2,021,873	+		CCNA_01882	0.81	-1.6
2,021,876	-		CCNA_01882	0.82	-0.1
2,021,884	+		CCNA_01882	0.83	+0.4
2,021,884	+		CCNA_01882	0.83	+0.2
2,021,934	-		CCNA_01882	0.88	-0.5
2,021,993	+				+0.2
2,021,993	+				+0.2
2,021,993	+				+2.5
2,021,993	+				+1.9
2,021,993	+				+1.9
2,021,993	+				-0.5
2,021,993	+				-0.5
2,021,993	+				+0.5
2,021,995	+				-1.1
2,022,001	-				+0.2
2,022,001	-				+0.5
2,022,001	-				-0.1
2,022,021	-				-0.3
2,022,030	+				+0.9
2,022,030	+				-0.0
2,022,043	-				-0.1
2,022,054	+				-1.1
2,022,054	+				-1.4
2,022,066	+				-0.2
2,022,147	+				-0.1
2,022,174	+		CCNA_01883	0.11	+0.2
2,022,186	+		CCNA_01883	0.12	-0.8
2,022,192	-		CCNA_01883	0.12	-0.1
2,022,228	+		CCNA_01883	0.15	-1.1
2,022,236	-		CCNA_01883	0.16	-0.3
2,022,252	+		CCNA_01883	0.17	+0.9
2,022,268	+		CCNA_01883	0.19	-1.4
2,022,269	+		CCNA_01883	0.19	-1.2
2,022,316	+		CCNA_01883	0.23	-1.0
2,022,326	+		CCNA_01883	0.24	-0.1
2,022,327	+		CCNA_01883	0.24	-0.7
2,022,342	+		CCNA_01883	0.25	+1.9
2,022,342	+		CCNA_01883	0.25	+0.9
2,022,374	-		CCNA_01883	0.28	+0.9
2,022,380	+		CCNA_01883	0.28	+0.9
2,022,387	-		CCNA_01883	0.29	-1.4
2,022,422	+		CCNA_01883	0.32	+0.9
2,022,447	-		CCNA_01883	0.34	-1.9
2,022,547	-		CCNA_01883	0.42	-1.2
2,022,571	+		CCNA_01883	0.44	+0.9
2,022,584	-		CCNA_01883	0.46	+0.7
2,022,595	+		CCNA_01883	0.46	+0.2
2,022,603	-		CCNA_01883	0.47	+1.5
2,022,603	-		CCNA_01883	0.47	-1.0
2,022,648	+		CCNA_01883	0.51	-1.2
2,022,653	+		CCNA_01883	0.51	-1.5
2,022,653	+		CCNA_01883	0.51	-1.3
2,022,653	+		CCNA_01883	0.51	-0.2
2,022,653	+		CCNA_01883	0.51	+1.5
2,022,661	-		CCNA_01883	0.52	+1.6
2,022,661	-		CCNA_01883	0.52	-3.1
2,022,661	-		CCNA_01883	0.52	-1.3
2,022,661	-		CCNA_01883	0.52	-0.3
2,022,709	+		CCNA_01883	0.56	-1.2
2,022,730	-		CCNA_01883	0.58	-1.3
2,022,748	-		CCNA_01883	0.60	-2.6
2,022,754	-		CCNA_01883	0.60	+0.5
2,022,765	-		CCNA_01883	0.61	-0.3
2,022,786	+		CCNA_01883	0.63	+0.5
2,022,806	-		CCNA_01883	0.64	-1.6
2,022,808	-		CCNA_01883	0.65	-0.3
2,022,856	-		CCNA_01883	0.69	-0.5
2,022,867	+		CCNA_01883	0.70	+0.5
2,022,913	+		CCNA_01883	0.74	+0.2
2,022,933	-		CCNA_01883	0.75	-0.5
2,022,955	+		CCNA_01883	0.77	-0.3
2,022,977	+		CCNA_01883	0.79	+1.5
2,022,977	+		CCNA_01883	0.79	+0.5
2,022,977	+		CCNA_01883	0.79	+0.9
2,022,977	+		CCNA_01883	0.79	-0.7
2,022,984	+		CCNA_01883	0.80	-0.1
2,023,015	+		CCNA_01883	0.82	-1.3
2,023,020	+		CCNA_01883	0.83	+0.5