Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01859

Experiment: PYE with Benzalkonium Chloride 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Benzalkonium Chloride 0.0001 mg/ml
1,990,876	-				+1.6
1,990,903	+				-0.3
1,990,903	+				-1.5
1,990,903	+				-1.3
1,990,903	+				-1.2
1,990,903	+				+0.7
1,990,911	-				+1.0
1,990,975	+		CCNA_01858	0.12	-2.4
1,990,983	+		CCNA_01858	0.13	-1.3
1,990,990	+		CCNA_01858	0.14	-0.0
1,991,025	+		CCNA_01858	0.17	-1.3
1,991,075	+		CCNA_01858	0.23	+1.0
1,991,075	+		CCNA_01858	0.23	+0.4
1,991,075	+		CCNA_01858	0.23	+0.6
1,991,137	+		CCNA_01858	0.30	+0.6
1,991,145	-		CCNA_01858	0.31	+0.2
1,991,183	+		CCNA_01858	0.35	+1.3
1,991,211	+		CCNA_01858	0.38	+0.0
1,991,279	-		CCNA_01858	0.46	-1.3
1,991,279	-		CCNA_01858	0.46	+0.2
1,991,296	+		CCNA_01858	0.48	-0.9
1,991,304	-		CCNA_01858	0.48	+1.6
1,991,353	+		CCNA_01858	0.54	-1.1
1,991,353	+		CCNA_01858	0.54	-0.8
1,991,417	+		CCNA_01858	0.61	-0.9
1,991,425	-		CCNA_01858	0.62	+2.6
1,991,461	+		CCNA_01858	0.66	-0.9
1,991,461	+		CCNA_01858	0.66	-2.0
1,991,469	-		CCNA_01858	0.67	+2.6
1,991,469	-		CCNA_01858	0.67	-0.0
1,991,471	+		CCNA_01858	0.67	-1.0
1,991,509	-		CCNA_01858	0.71	+1.2
1,991,549	-		CCNA_01858	0.76	+0.6
1,991,570	+		CCNA_01858	0.78	-0.8
1,991,570	+		CCNA_01858	0.78	+0.4
1,991,570	+		CCNA_01858	0.78	+0.2
1,991,580	+		CCNA_01858	0.79	+1.1
1,991,583	-		CCNA_01858	0.79	-0.0
1,991,613	+		CCNA_01858	0.83	-1.3
1,991,613	+		CCNA_01858	0.83	-0.4
1,991,613	+		CCNA_01858	0.83	+1.0
1,991,613	+		CCNA_01858	0.83	-0.6
1,991,613	+		CCNA_01858	0.83	-1.0
1,991,613	+		CCNA_01858	0.83	-0.9
1,991,613	+		CCNA_01858	0.83	+2.2
1,991,621	-		CCNA_01858	0.83	-0.6
1,991,646	+		CCNA_01858	0.86	-1.1
1,991,656	+		CCNA_01858	0.87	-0.2
1,991,656	+		CCNA_01858	0.87	-0.5
1,991,682	+				-2.0
1,991,682	+				+0.2
1,991,682	+				-1.2
1,991,682	+				-0.4
1,991,682	+				+1.0
1,991,682	+				-0.6
1,991,682	+				-0.3
1,991,690	-				-0.8
1,991,753	+				+2.3
1,991,754	+				+0.2
1,991,762	-				-0.0
1,991,762	-				-0.8
1,991,762	-				-0.0
1,991,763	+				+1.3
1,991,763	+				+2.6
1,991,771	-				+0.2
1,991,772	-				+1.0
1,991,776	+				+0.2
1,991,794	+				-0.8
1,991,842	-				-0.6
1,991,846	+				-0.5
1,991,846	+				-1.1
1,991,890	+				-0.8
1,991,900	+				-0.4
1,991,915	+				-0.2
1,991,921	+				-0.4
1,991,929	-				+1.0
1,991,938	+				+1.0
1,991,970	+				-1.1
1,991,975	+				+1.6
1,991,975	+				-0.6
1,991,975	+				+1.0
1,991,975	+				-0.2
1,991,983	-				-0.4
1,991,983	-				-2.5
1,991,983	-				-0.6
1,991,983	-				+1.6
1,991,983	-				-0.0
1,991,983	-				-0.2
1,992,012	+				-0.2
1,992,052	+				-0.2
1,992,078	+		CCNA_01859	0.11	-1.3
1,992,078	+		CCNA_01859	0.11	-0.2
1,992,086	-		CCNA_01859	0.12	-0.1
1,992,097	+		CCNA_01859	0.12	-0.2
1,992,117	-		CCNA_01859	0.13	+1.0
1,992,128	-		CCNA_01859	0.14	+1.6
1,992,181	+		CCNA_01859	0.16	+0.2
1,992,184	-		CCNA_01859	0.16	+1.6
1,992,184	-		CCNA_01859	0.16	+1.0
1,992,197	-		CCNA_01859	0.17	+0.2
1,992,202	+		CCNA_01859	0.17	-1.4
1,992,310	+		CCNA_01859	0.23	-1.0
1,992,310	+		CCNA_01859	0.23	-0.8
1,992,318	-		CCNA_01859	0.23	-0.4
1,992,318	-		CCNA_01859	0.23	+0.6
1,992,457	+		CCNA_01859	0.30	-1.5
1,992,457	+		CCNA_01859	0.30	-0.4
1,992,465	-		CCNA_01859	0.30	-1.1
1,992,516	+		CCNA_01859	0.33	-0.4
1,992,524	-		CCNA_01859	0.33	-0.8
1,992,567	-		CCNA_01859	0.35	-0.9
1,992,631	+		CCNA_01859	0.38	-0.0
1,992,680	-		CCNA_01859	0.41	+1.6
1,992,684	+		CCNA_01859	0.41	-0.7
1,992,690	+		CCNA_01859	0.41	-0.6
1,992,695	+		CCNA_01859	0.41	+1.2
1,992,700	+		CCNA_01859	0.42	+2.3
1,992,734	+		CCNA_01859	0.43	+0.2
1,992,734	+		CCNA_01859	0.43	-0.6
1,992,734	+		CCNA_01859	0.43	-1.1
1,992,734	+		CCNA_01859	0.43	-1.5
1,992,734	+		CCNA_01859	0.43	-0.9
1,992,734	+		CCNA_01859	0.43	-0.4
1,992,734	+		CCNA_01859	0.43	-2.4
1,992,734	+		CCNA_01859	0.43	-1.6
1,992,734	+		CCNA_01859	0.43	+0.6
1,992,734	+		CCNA_01859	0.43	-0.0
1,992,742	-		CCNA_01859	0.44	+2.6
1,992,742	-		CCNA_01859	0.44	+0.6
1,992,747	-		CCNA_01859	0.44	-0.0
1,992,747	-		CCNA_01859	0.44	-0.9
1,992,757	-		CCNA_01859	0.44	+1.6
1,992,768	-		CCNA_01859	0.45	-1.0
1,992,770	-		CCNA_01859	0.45	+0.6
1,992,828	-		CCNA_01859	0.48	-0.4
1,992,836	+		CCNA_01859	0.48	-2.3
1,992,898	+		CCNA_01859	0.51	-0.0
1,992,931	+		CCNA_01859	0.53	+0.6
1,992,949	+		CCNA_01859	0.54	-0.2
1,992,992	-		CCNA_01859	0.56	-0.2
1,993,043	-		CCNA_01859	0.59	+0.6
1,993,067	-		CCNA_01859	0.60	+0.6
1,993,067	-		CCNA_01859	0.60	-0.0
1,993,157	-		CCNA_01859	0.64	+1.6
1,993,182	+		CCNA_01859	0.65	-0.4
1,993,210	-		CCNA_01859	0.67	+1.6
1,993,236	+		CCNA_01859	0.68	-0.6
1,993,278	+		CCNA_01859	0.70	-0.2
1,993,278	+		CCNA_01859	0.70	+0.2
1,993,359	+		CCNA_01859	0.74	-1.6
1,993,364	+		CCNA_01859	0.74	-0.4
1,993,374	+		CCNA_01859	0.75	-0.2
1,993,404	-		CCNA_01859	0.76	+0.6
1,993,518	+		CCNA_01859	0.82	-2.4
1,993,525	+		CCNA_01859	0.82	+2.6
1,993,526	-		CCNA_01859	0.82	+0.1
1,993,541	-		CCNA_01859	0.83	-0.2
1,993,590	+		CCNA_01859	0.85	-1.8
1,993,665	+		CCNA_01859	0.89	-1.0
1,993,673	-		CCNA_01859	0.90	+1.6
1,993,726	+				+2.5
1,993,825	+				+0.6
1,993,826	+				-0.6
1,993,826	+				-0.9
1,993,829	+				+1.4
1,993,831	+				+1.0
1,993,834	-				-0.8
1,993,834	-				-1.0
1,993,912	+				+0.0
1,993,920	-				-1.0
1,993,932	+				+0.4
1,993,943	+				+0.1
1,993,943	+				+1.3
1,993,943	+				+0.6
1,993,951	-				+0.1
1,993,982	+				-1.0
1,994,001	+				+0.2
1,994,004	+		CCNA_01860	0.10	+1.2
1,994,069	+		CCNA_01860	0.16	-0.4
1,994,072	+		CCNA_01860	0.16	+1.0
1,994,080	-		CCNA_01860	0.17	-0.8
1,994,117	+		CCNA_01860	0.20	-0.0
1,994,169	-		CCNA_01860	0.25	+2.6
1,994,175	+		CCNA_01860	0.25	-2.6
1,994,193	-		CCNA_01860	0.27	-2.2
1,994,229	-		CCNA_01860	0.30	+2.6
1,994,289	+		CCNA_01860	0.35	-3.3
1,994,290	+		CCNA_01860	0.35	-2.1
1,994,356	-		CCNA_01860	0.41	+2.6
1,994,358	+		CCNA_01860	0.41	-0.0
1,994,366	-		CCNA_01860	0.42	-1.4
1,994,418	+		CCNA_01860	0.46	-0.2
1,994,418	+		CCNA_01860	0.46	+1.2
1,994,418	+		CCNA_01860	0.46	-2.2
1,994,418	+		CCNA_01860	0.46	-0.2
1,994,418	+		CCNA_01860	0.46	+0.2
1,994,418	+		CCNA_01860	0.46	-2.4
1,994,426	-		CCNA_01860	0.47	-0.6
1,994,456	+		CCNA_01860	0.50	-0.5
1,994,464	+		CCNA_01860	0.50	-0.5
1,994,472	-		CCNA_01860	0.51	-0.0
1,994,472	-		CCNA_01860	0.51	-0.2
1,994,489	+		CCNA_01860	0.52	-2.1
1,994,497	-		CCNA_01860	0.53	+1.0
1,994,573	+		CCNA_01860	0.60	-0.7
1,994,579	+		CCNA_01860	0.60	-1.5
1,994,587	-		CCNA_01860	0.61	+0.2
1,994,616	+		CCNA_01860	0.64	+0.3
1,994,616	+		CCNA_01860	0.64	-1.2
1,994,616	+		CCNA_01860	0.64	+2.0
1,994,651	-		CCNA_01860	0.67	-0.6
1,994,651	-		CCNA_01860	0.67	-1.0
1,994,670	+		CCNA_01860	0.68	-0.8
1,994,678	-		CCNA_01860	0.69	+1.6
1,994,714	-		CCNA_01860	0.72	+0.6
1,994,806	-		CCNA_01860	0.80	-1.0
1,994,866	+		CCNA_01860	0.85	-0.8
1,994,866	+		CCNA_01860	0.85	-0.7
1,994,866	+		CCNA_01860	0.85	-0.0
1,994,866	+		CCNA_01860	0.85	+0.8
1,994,866	+		CCNA_01860	0.85	-1.3
1,994,866	+		CCNA_01860	0.85	-1.1
1,994,866	+		CCNA_01860	0.85	-0.2
1,994,874	-		CCNA_01860	0.86	+1.0
1,994,874	-		CCNA_01860	0.86	-0.2
1,994,874	-		CCNA_01860	0.86	+0.2
1,994,885	-		CCNA_01860	0.87	+1.0