Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01850

Experiment: PYE with Benzalkonium Chloride 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Benzalkonium Chloride 0.0001 mg/ml
1,979,731	-		CCNA_01848	0.11	+2.1
1,979,743	-		CCNA_01848	0.14	+2.0
1,979,743	-		CCNA_01848	0.14	+2.3
1,979,745	-		CCNA_01848	0.14	+1.4
1,979,746	-		CCNA_01848	0.15	+1.2
1,979,754	-		CCNA_01848	0.17	+2.1
1,979,789	-		CCNA_01848	0.26	+2.6
1,979,791	-		CCNA_01848	0.26	+2.5
1,979,791	-		CCNA_01848	0.26	+1.4
1,979,837	-		CCNA_01848	0.38	+2.7
1,979,839	-		CCNA_01848	0.38	+2.7
1,979,851	+		CCNA_01848	0.42	+0.0
1,979,853	-		CCNA_01848	0.42	+2.8
1,979,860	-		CCNA_01848	0.44	+2.7
1,979,882	-		CCNA_01848	0.49	+3.1
1,979,914	-		CCNA_01848	0.58	+2.8
1,979,914	-		CCNA_01848	0.58	+1.9
1,979,919	-		CCNA_01848	0.59	+2.2
1,979,948	-		CCNA_01848	0.66	+1.1
1,980,001	-		CCNA_01848	0.80	+2.6
1,980,006	-				+2.6
1,980,035	+		CCNA_01848	0.89	+1.0
1,980,084	-				+2.2
1,980,117	+				-0.2
1,980,159	+		CCNA_01849	0.13	+0.3
1,980,210	-		CCNA_01849	0.22	+3.0
1,980,217	-		CCNA_01849	0.23	+2.7
1,980,240	+		CCNA_01849	0.26	+2.6
1,980,248	-		CCNA_01849	0.28	+3.1
1,980,253	-		CCNA_01849	0.28	+2.8
1,980,259	-		CCNA_01849	0.29	+3.2
1,980,267	-		CCNA_01849	0.31	+2.7
1,980,295	-		CCNA_01849	0.35	+2.3
1,980,305	-		CCNA_01849	0.37	+1.6
1,980,313	-		CCNA_01849	0.38	+3.0
1,980,406	-		CCNA_01849	0.53	+2.7
1,980,406	-		CCNA_01849	0.53	+2.7
1,980,406	-		CCNA_01849	0.53	+2.3
1,980,412	+		CCNA_01849	0.54	+1.0
1,980,417	+		CCNA_01849	0.55	-0.6
1,980,420	-		CCNA_01849	0.55	+2.0
1,980,434	+		CCNA_01849	0.57	+2.6
1,980,442	-		CCNA_01849	0.59	+2.7
1,980,449	-		CCNA_01849	0.60	+2.9
1,980,467	-		CCNA_01849	0.63	+2.6
1,980,499	-		CCNA_01849	0.68	+2.3
1,980,499	-		CCNA_01849	0.68	+2.5
1,980,504	-		CCNA_01849	0.68	+1.5
1,980,506	+		CCNA_01849	0.69	-1.1
1,980,514	-		CCNA_01849	0.70	+3.0
1,980,519	-		CCNA_01849	0.71	+2.6
1,980,576	+		CCNA_01849	0.80	-0.9
1,980,583	-		CCNA_01849	0.81	+2.4
1,980,627	+		CCNA_01849	0.88	+1.0
1,980,662	-				+2.3
1,980,682	+				+1.0
1,980,690	-				+2.4
1,980,690	-				+1.0
1,980,705	-				+2.6
1,980,705	-				+2.2
1,980,705	-				+1.1
1,980,705	-				+1.6
1,980,705	-				+1.8
1,980,731	-				+2.1
1,980,731	-				+3.4
1,980,795	-				+1.4
1,980,823	-				+2.0
1,980,828	-				+2.4
1,980,830	+				+1.6
1,980,838	-				+2.0
1,980,881	-				+2.2
1,980,966	-		CCNA_01850	0.13	+1.6
1,980,981	-		CCNA_01850	0.14	+2.6
1,980,984	-		CCNA_01850	0.14	+2.1
1,981,033	-		CCNA_01850	0.16	+2.1
1,981,033	-		CCNA_01850	0.16	+2.6
1,981,105	-		CCNA_01850	0.20	+1.8
1,981,113	-		CCNA_01850	0.20	+3.0
1,981,163	+		CCNA_01850	0.23	+1.0
1,981,171	-		CCNA_01850	0.23	+2.2
1,981,171	-		CCNA_01850	0.23	+2.3
1,981,207	-		CCNA_01850	0.25	+1.2
1,981,255	-		CCNA_01850	0.28	+2.1
1,981,305	-		CCNA_01850	0.30	+1.8
1,981,305	-		CCNA_01850	0.30	+2.6
1,981,305	-		CCNA_01850	0.30	+1.1
1,981,333	-		CCNA_01850	0.31	+1.4
1,981,358	-		CCNA_01850	0.33	+2.3
1,981,358	-		CCNA_01850	0.33	+2.6
1,981,428	+		CCNA_01850	0.36	+2.6
1,981,450	-		CCNA_01850	0.37	+0.2
1,981,471	-		CCNA_01850	0.38	+2.6
1,981,491	-		CCNA_01850	0.39	+2.2
1,981,537	-		CCNA_01850	0.42	+4.6
1,981,607	-		CCNA_01850	0.45	+2.2
1,981,615	-		CCNA_01850	0.46	+4.3
1,981,654	+		CCNA_01850	0.48	-0.4
1,981,664	-		CCNA_01850	0.48	+1.9
1,981,684	+		CCNA_01850	0.49	+1.0
1,981,692	+		CCNA_01850	0.49	+0.6
1,981,700	-		CCNA_01850	0.50	+2.5
1,981,700	-		CCNA_01850	0.50	+2.1
1,981,729	-		CCNA_01850	0.51	+2.5
1,981,730	-		CCNA_01850	0.51	+1.9
1,981,730	-		CCNA_01850	0.51	+2.6
1,981,737	-		CCNA_01850	0.52	+2.4
1,981,737	-		CCNA_01850	0.52	+2.5
1,981,830	+		CCNA_01850	0.56	+0.0
1,981,922	-		CCNA_01850	0.61	+2.2
1,981,937	+		CCNA_01850	0.62	-1.5
1,981,961	+		CCNA_01850	0.63	-0.7
1,981,994	-		CCNA_01850	0.65	+2.7
1,981,994	-		CCNA_01850	0.65	+1.4
1,981,994	-		CCNA_01850	0.65	+2.5
1,982,023	-		CCNA_01850	0.66	+2.2
1,982,036	-		CCNA_01850	0.67	+2.3
1,982,064	+		CCNA_01850	0.68	+1.0
1,982,072	-		CCNA_01850	0.68	+2.6
1,982,072	-		CCNA_01850	0.68	+2.3
1,982,072	-		CCNA_01850	0.68	+2.6
1,982,190	+		CCNA_01850	0.74	+0.0
1,982,198	-		CCNA_01850	0.75	+2.3
1,982,210	+		CCNA_01850	0.75	+3.6
1,982,223	-		CCNA_01850	0.76	+2.6
1,982,250	-		CCNA_01850	0.77	+3.0
1,982,324	-		CCNA_01850	0.81	+2.5
1,982,353	-		CCNA_01850	0.83	+3.1
1,982,358	-		CCNA_01850	0.83	+2.7
1,982,380	-		CCNA_01850	0.84	+1.6
1,982,380	-		CCNA_01850	0.84	+2.5
1,982,429	-		CCNA_01850	0.86	+3.1
1,982,496	-		CCNA_01850	0.90	+2.6
1,982,497	+		CCNA_01850	0.90	+1.0
1,982,501	-		CCNA_01850	0.90	+2.8
1,982,523	+				+1.0
1,982,568	-				+3.1
1,982,580	+				+0.6
1,982,595	-				+4.2
1,982,597	+				-0.2
1,982,605	-				+3.3
1,982,611	+				+1.0
1,982,629	+				+0.8
1,982,637	-				+1.9
1,982,637	-				+2.0
1,982,707	-				+2.4
1,982,746	-				+2.3
1,982,820	-				+2.9
1,982,820	-				+2.6
1,982,820	-				+3.4
1,982,853	-		CCNA_01851	0.13	+3.2
1,982,864	-		CCNA_01851	0.14	+2.4
1,982,887	-		CCNA_01851	0.16	+2.1
1,982,899	-		CCNA_01851	0.17	+3.1
1,982,910	-		CCNA_01851	0.18	+2.7
1,982,910	-		CCNA_01851	0.18	+2.9
1,982,938	-		CCNA_01851	0.21	+2.7
1,982,943	-		CCNA_01851	0.21	+2.8
1,982,943	-		CCNA_01851	0.21	+2.8
1,982,943	-		CCNA_01851	0.21	+3.0
1,982,965	-		CCNA_01851	0.23	+2.9
1,982,965	-		CCNA_01851	0.23	+3.2
1,982,965	-		CCNA_01851	0.23	+3.0
1,982,965	-		CCNA_01851	0.23	+2.9
1,982,970	-		CCNA_01851	0.24	+2.8
1,983,053	-		CCNA_01851	0.31	+2.9
1,983,105	-		CCNA_01851	0.36	+2.9
1,983,119	-		CCNA_01851	0.38	+2.6
1,983,119	-		CCNA_01851	0.38	+2.8
1,983,160	-		CCNA_01851	0.41	+2.6
1,983,187	+		CCNA_01851	0.44	+1.6
1,983,192	+		CCNA_01851	0.44	+1.0
1,983,200	-		CCNA_01851	0.45	+3.1
1,983,200	-		CCNA_01851	0.45	+3.2
1,983,200	-		CCNA_01851	0.45	+4.2
1,983,200	-		CCNA_01851	0.45	+2.6
1,983,200	-		CCNA_01851	0.45	+3.0
1,983,200	-		CCNA_01851	0.45	+2.9
1,983,200	-		CCNA_01851	0.45	+2.8
1,983,200	-		CCNA_01851	0.45	+3.2
1,983,200	-		CCNA_01851	0.45	+2.7
1,983,268	-		CCNA_01851	0.52	+2.7
1,983,308	+		CCNA_01851	0.55	+0.3
1,983,424	+		CCNA_01851	0.66	+2.6
1,983,431	-		CCNA_01851	0.67	+2.8
1,983,441	-		CCNA_01851	0.68	+2.5
1,983,451	-		CCNA_01851	0.69	+3.0
1,983,476	+		CCNA_01851	0.71	+0.3
1,983,510	-		CCNA_01851	0.74	+2.0
1,983,581	-		CCNA_01851	0.81	+2.3
1,983,592	-		CCNA_01851	0.82	+2.1
1,983,625	-		CCNA_01851	0.85	+2.3
1,983,660	-		CCNA_01851	0.89	+1.6