Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01790

Experiment: PYE with Benzalkonium Chloride 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Benzalkonium Chloride 0.0001 mg/ml
1,916,346	+		CCNA_01788	0.65	+2.1
1,916,346	+		CCNA_01788	0.65	+1.1
1,916,346	+		CCNA_01788	0.65	+0.1
1,916,346	+		CCNA_01788	0.65	+1.7
1,916,346	+		CCNA_01788	0.65	-0.3
1,916,346	+		CCNA_01788	0.65	-0.6
1,916,380	+		CCNA_01788	0.75	-1.1
1,916,380	+		CCNA_01788	0.75	+0.7
1,916,388	-		CCNA_01788	0.77	+0.1
1,916,405	-		CCNA_01788	0.82	+1.7
1,916,455	+				+0.7
1,916,463	+				-0.8
1,916,476	-				+1.1
1,916,484	-				+0.4
1,916,509	+				+1.7
1,916,517	-				-0.1
1,916,569	+				-0.9
1,916,601	-				+0.1
1,916,601	-				+1.7
1,916,612	+				-0.3
1,916,631	-				+1.7
1,916,652	-				+0.7
1,916,654	+				+0.4
1,916,654	-				-1.0
1,916,668	-				-0.4
1,916,692	-				-0.7
1,916,715	-		CCNA_01789	0.13	+0.1
1,916,775	-		CCNA_01789	0.24	-0.0
1,916,847	+		CCNA_01789	0.38	-0.9
1,916,853	+		CCNA_01789	0.40	-1.7
1,916,853	+		CCNA_01789	0.40	-1.3
1,916,853	+		CCNA_01789	0.40	-0.6
1,916,861	-		CCNA_01789	0.41	+0.5
1,916,861	-		CCNA_01789	0.41	+0.5
1,916,861	-		CCNA_01789	0.41	-1.6
1,916,897	-		CCNA_01789	0.48	+2.1
1,916,897	-		CCNA_01789	0.48	+0.1
1,916,927	+		CCNA_01789	0.54	+0.4
1,916,927	+		CCNA_01789	0.54	+0.2
1,916,949	+		CCNA_01789	0.58	-0.3
1,916,971	+		CCNA_01789	0.62	-0.3
1,916,971	+		CCNA_01789	0.62	-1.0
1,916,979	-		CCNA_01789	0.64	-0.6
1,916,979	-		CCNA_01789	0.64	+0.9
1,916,979	-		CCNA_01789	0.64	-0.3
1,917,053	+		CCNA_01789	0.78	-0.9
1,917,053	+		CCNA_01789	0.78	-0.9
1,917,053	+		CCNA_01789	0.78	-0.3
1,917,061	-		CCNA_01789	0.80	+0.6
1,917,078	-		CCNA_01789	0.83	-1.2
1,917,102	+		CCNA_01789	0.88	+0.1
1,917,105	-		CCNA_01789	0.88	-0.8
1,917,105	-		CCNA_01789	0.88	-0.6
1,917,154	-				-0.3
1,917,176	-				-1.5
1,917,193	+				-0.3
1,917,528	+		CCNA_01790	0.48	+2.7
1,917,528	+		CCNA_01790	0.48	+2.1
1,917,556	+		CCNA_01790	0.54	+1.9
1,917,570	+		CCNA_01790	0.57	+3.4
1,917,630	+		CCNA_01790	0.70	+1.2
1,917,675	+		CCNA_01790	0.79	+2.7
1,917,683	-		CCNA_01790	0.81	+0.1
1,917,697	+		CCNA_01790	0.84	+3.1
1,917,720	-		CCNA_01790	0.89	+0.4
1,917,720	-		CCNA_01790	0.89	+1.7
1,917,733	+				+2.6
1,917,765	+				+3.1
1,917,767	-				+0.4
1,917,767	-				+1.7
1,917,782	-				+0.5
1,917,841	+				+1.3