Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01735

Experiment: PYE with Benzalkonium Chloride 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Benzalkonium Chloride 0.0001 mg/ml
1,862,705	+		CCNA_01733	0.80	-0.3
1,862,705	+				+2.6
1,862,705	+		CCNA_01733	0.80	+0.1
1,862,712	+		CCNA_01733	0.81	-0.2
1,862,713	-		CCNA_01733	0.81	+1.2
1,862,720	-		CCNA_01733	0.82	+0.5
1,862,745	-		CCNA_01733	0.84	+1.1
1,862,857	-				+0.6
1,862,864	-				+0.4
1,862,915	+				+2.7
1,862,927	+				+2.3
1,862,927	+				-0.8
1,862,935	-				+0.1
1,862,956	-				+0.2
1,863,027	+				+1.7
1,863,027	+				-0.4
1,863,035	-		CCNA_01734	0.11	+1.1
1,863,054	+		CCNA_01734	0.14	+0.7
1,863,062	-		CCNA_01734	0.15	+1.7
1,863,062	-		CCNA_01734	0.15	+0.7
1,863,093	+		CCNA_01734	0.19	+0.3
1,863,101	-		CCNA_01734	0.21	-0.7
1,863,106	-		CCNA_01734	0.21	+1.7
1,863,111	+		CCNA_01734	0.22	+0.3
1,863,111	-		CCNA_01734	0.22	-0.3
1,863,123	+		CCNA_01734	0.24	-0.5
1,863,126	-		CCNA_01734	0.24	+2.3
1,863,148	-		CCNA_01734	0.27	-1.2
1,863,148	-		CCNA_01734	0.27	-0.5
1,863,153	-		CCNA_01734	0.28	+0.7
1,863,280	-		CCNA_01734	0.47	+1.6
1,863,298	+		CCNA_01734	0.49	-0.8
1,863,306	-		CCNA_01734	0.50	-0.3
1,863,318	+		CCNA_01734	0.52	+0.7
1,863,345	-		CCNA_01734	0.56	-0.8
1,863,423	-		CCNA_01734	0.67	+1.1
1,863,425	+		CCNA_01734	0.68	+0.1
1,863,425	+		CCNA_01734	0.68	-1.0
1,863,430	+		CCNA_01734	0.68	-0.5
1,863,483	-		CCNA_01734	0.76	+1.1
1,863,528	+		CCNA_01734	0.83	-1.9
1,863,528	+		CCNA_01734	0.83	+1.1
1,863,528	+		CCNA_01734	0.83	+0.1
1,863,528	+		CCNA_01734	0.83	+0.9
1,863,528	+		CCNA_01734	0.83	+0.3
1,863,528	+		CCNA_01734	0.83	+0.7
1,863,536	-		CCNA_01734	0.84	+0.1
1,863,536	-		CCNA_01734	0.84	-1.7
1,863,536	-		CCNA_01734	0.84	+1.8
1,863,536	-		CCNA_01734	0.84	-3.1
1,863,536	-		CCNA_01734	0.84	-0.5
1,863,536	-		CCNA_01734	0.84	+0.3
1,863,536	-		CCNA_01734	0.84	-1.2
1,863,545	+		CCNA_01734	0.85	-0.5
1,863,553	-		CCNA_01734	0.86	-0.5
1,863,553	-		CCNA_01734	0.86	-0.5
1,863,588	+				+0.7
1,863,616	+				-1.7
1,863,616	+				+1.9
1,863,616	+				+0.1
1,863,624	-				+0.7
1,863,624	-				-0.6
1,863,624	-				-0.1
1,863,624	-				-1.1
1,863,624	-				-0.2
1,863,731	-				+0.4
1,863,736	-				+2.3
1,863,737	+				-0.4
1,863,741	+				+1.7
1,863,745	-				-0.5
1,863,772	-		CCNA_01735	0.14	+2.7
1,863,773	+		CCNA_01735	0.14	-0.9
1,863,773	+		CCNA_01735	0.14	-0.6
1,863,793	-		CCNA_01735	0.18	+1.1
1,863,910	+		CCNA_01735	0.42	-1.5
1,863,910	+		CCNA_01735	0.42	+1.4
1,863,918	-		CCNA_01735	0.44	-2.7
1,863,918	-		CCNA_01735	0.44	-0.3
1,863,918	-		CCNA_01735	0.44	+0.4
1,863,931	+		CCNA_01735	0.47	+0.1
1,863,937	+		CCNA_01735	0.48	+2.7
1,863,950	-				+1.7
1,863,983	+		CCNA_01735	0.57	+1.1
1,863,996	-		CCNA_01735	0.60	-0.5
1,864,082	+		CCNA_01735	0.78	-0.1
1,864,184	+				-0.1
1,864,184	+				+0.1
1,864,184	+				+0.7
1,864,184	+				+0.7
1,864,184	+				-1.1
1,864,184	+				-0.6
1,864,184	+				+1.1
1,864,185	-				+0.4
1,864,192	-				-0.9
1,864,237	+				-1.5
1,864,294	-				+0.1
1,864,396	-		CCNA_01736	0.18	+1.1
1,864,408	-		CCNA_01736	0.20	+1.3
1,864,420	-		CCNA_01736	0.22	+1.1
1,864,431	+		CCNA_01736	0.24	+0.8
1,864,439	-		CCNA_01736	0.25	+0.3
1,864,439	-		CCNA_01736	0.25	+2.9
1,864,451	+		CCNA_01736	0.27	-1.4
1,864,465	-		CCNA_01736	0.30	+0.6
1,864,495	-		CCNA_01736	0.35	+0.3
1,864,560	-		CCNA_01736	0.46	-1.1
1,864,568	-		CCNA_01736	0.47	+0.9
1,864,580	-		CCNA_01736	0.49	+1.4
1,864,580	-		CCNA_01736	0.49	+1.7
1,864,589	+		CCNA_01736	0.50	+0.2
1,864,590	+		CCNA_01736	0.51	+0.3
1,864,597	+		CCNA_01736	0.52	+0.7
1,864,598	-		CCNA_01736	0.52	+0.7
1,864,603	-		CCNA_01736	0.53	+0.9
1,864,679	+		CCNA_01736	0.65	-1.1
1,864,724	+		CCNA_01736	0.73	-0.8
1,864,741	+		CCNA_01736	0.76	-0.3
1,864,751	+		CCNA_01736	0.77	+1.1
1,864,759	-		CCNA_01736	0.79	-0.1
1,864,759	-		CCNA_01736	0.79	-0.4
1,864,761	+		CCNA_01736	0.79	+0.2
1,864,769	-		CCNA_01736	0.80	+0.2
1,864,770	+		CCNA_01736	0.81	-0.5
1,864,785	+		CCNA_01736	0.83	+0.3
1,864,787	+		CCNA_01736	0.83	-0.6
1,864,802	-		CCNA_01736	0.86	+0.2
1,864,803	-		CCNA_01736	0.86	+1.2
1,864,838	-				+0.8
1,864,838	-				+1.0
1,864,858	-				+0.2
1,864,858	-				+0.1
1,864,858	-				+0.9
1,864,859	+				+0.1
1,864,910	+				-0.5