Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01640

Experiment: PYE with Benzalkonium Chloride 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Benzalkonium Chloride 0.0001 mg/ml
1,760,176	-		CCNA_01639	0.41	+1.9
1,760,187	+		CCNA_01639	0.42	+2.0
1,760,292	-		CCNA_01639	0.50	+0.5
1,760,344	-		CCNA_01639	0.54	-0.9
1,760,344	-		CCNA_01639	0.54	+0.6
1,760,486	+		CCNA_01639	0.64	-1.5
1,760,486	+		CCNA_01639	0.64	-0.5
1,760,494	-		CCNA_01639	0.65	+0.2
1,760,625	+		CCNA_01639	0.75	-0.3
1,760,633	-		CCNA_01639	0.76	+0.2
1,760,638	+		CCNA_01639	0.76	+1.1
1,760,694	+		CCNA_01639	0.80	-0.1
1,760,717	+		CCNA_01639	0.82	-0.1
1,760,740	+		CCNA_01639	0.84	+0.5
1,760,811	+		CCNA_01639	0.89	-1.9
1,760,919	+				+0.5
1,761,029	-				-1.2
1,761,047	-				+2.5
1,761,056	-				-1.6
1,761,058	+				-0.4
1,761,066	-				+0.1
1,761,150	-		CCNA_01640	0.17	-0.3
1,761,160	+		CCNA_01640	0.18	-1.4
1,761,217	+		CCNA_01640	0.24	-1.5
1,761,235	+		CCNA_01640	0.25	+0.0
1,761,277	-		CCNA_01640	0.30	-0.8
1,761,323	-		CCNA_01640	0.35	+0.5
1,761,323	-		CCNA_01640	0.35	-1.2
1,761,325	+		CCNA_01640	0.35	-0.1
1,761,345	-		CCNA_01640	0.37	-1.1
1,761,352	-		CCNA_01640	0.38	+0.0
1,761,355	+		CCNA_01640	0.38	-0.3
1,761,362	+		CCNA_01640	0.39	-0.3
1,761,370	-		CCNA_01640	0.39	-0.6
1,761,379	-		CCNA_01640	0.40	-0.5
1,761,384	-		CCNA_01640	0.41	-1.2
1,761,415	+		CCNA_01640	0.44	+0.9
1,761,423	-		CCNA_01640	0.45	-0.8
1,761,429	-		CCNA_01640	0.46	-0.5
1,761,429	-		CCNA_01640	0.46	+0.5
1,761,443	-		CCNA_01640	0.47	-1.0
1,761,450	+		CCNA_01640	0.48	-1.1
1,761,482	+		CCNA_01640	0.51	-0.8
1,761,482	+		CCNA_01640	0.51	-0.6
1,761,482	+		CCNA_01640	0.51	+1.5
1,761,489	-		CCNA_01640	0.52	+0.5
1,761,490	-		CCNA_01640	0.52	+2.9
1,761,490	-		CCNA_01640	0.52	-1.5
1,761,509	+		CCNA_01640	0.54	-1.4
1,761,509	+		CCNA_01640	0.54	+0.7
1,761,517	-		CCNA_01640	0.55	-0.2
1,761,519	+		CCNA_01640	0.55	-0.5
1,761,537	-		CCNA_01640	0.57	-1.3
1,761,542	-		CCNA_01640	0.57	+1.3
1,761,574	-		CCNA_01640	0.61	-1.8
1,761,694	+		CCNA_01640	0.73	+0.5
1,761,708	-		CCNA_01640	0.75	+0.5
1,761,721	+		CCNA_01640	0.76	-0.5
1,761,729	-		CCNA_01640	0.77	+0.9
1,761,773	-		CCNA_01640	0.81	+0.2
1,761,784	+		CCNA_01640	0.82	-2.0
1,761,792	-		CCNA_01640	0.83	+2.5
1,761,821	-		CCNA_01640	0.86	+0.9
1,761,888	-				+0.5
1,761,901	+				+0.5
1,761,909	-				-0.8
1,761,909	-				-0.6
1,761,923	+				+0.0
1,761,931	-				-0.6
1,761,957	+				+0.4
1,761,987	-				+0.9
1,762,007	+				-0.5
1,762,021	+				-0.8
1,762,028	-				-0.1
1,762,102	+		CCNA_01641	0.15	-1.2
1,762,110	-		CCNA_01641	0.16	+0.6
1,762,135	+		CCNA_01641	0.19	+1.7
1,762,143	-		CCNA_01641	0.19	+0.5
1,762,250	+		CCNA_01641	0.31	-2.2
1,762,250	+		CCNA_01641	0.31	-0.8
1,762,272	+		CCNA_01641	0.33	-0.4
1,762,306	+		CCNA_01641	0.37	+0.6
1,762,324	+		CCNA_01641	0.39	-0.8
1,762,324	+		CCNA_01641	0.39	+0.5
1,762,332	-		CCNA_01641	0.40	-0.1
1,762,332	-		CCNA_01641	0.40	-1.6
1,762,349	-		CCNA_01641	0.41	-2.3
1,762,357	+		CCNA_01641	0.42	-0.3
1,762,371	-		CCNA_01641	0.44	-2.4
1,762,395	+		CCNA_01641	0.46	-0.1
1,762,403	-		CCNA_01641	0.47	-0.9
1,762,403	-		CCNA_01641	0.47	-2.0
1,762,443	+		CCNA_01641	0.51	-0.1
1,762,461	-		CCNA_01641	0.53	+1.5
1,762,492	-		CCNA_01641	0.57	+0.0
1,762,606	-		CCNA_01641	0.69	-1.4
1,762,621	+		CCNA_01641	0.71	+1.3
1,762,661	+		CCNA_01641	0.75	+0.1
1,762,661	+		CCNA_01641	0.75	-1.7
1,762,664	-		CCNA_01641	0.75	+2.5
1,762,669	-		CCNA_01641	0.76	-1.2
1,762,669	-		CCNA_01641	0.76	-0.5
1,762,711	+		CCNA_01641	0.80	-0.5
1,762,786	+		CCNA_01641	0.88	-1.1
1,762,791	+		CCNA_01641	0.89	-0.2
1,762,808	-				-0.1
1,762,899	+				+0.6
1,762,899	+				-0.3
1,762,942	+				+0.9
1,762,942	+				-0.9