Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01587

Experiment: PYE with Benzalkonium Chloride 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Benzalkonium Chloride 0.0001 mg/ml
1,704,344	-				+1.4
1,704,347	+				-1.1
1,704,352	+				+0.0
1,704,352	+				-1.8
1,704,352	+				-0.4
1,704,360	-				+2.6
1,704,360	-				-0.7
1,704,360	-				+0.3
1,704,360	-				+0.0
1,704,360	-				+0.0
1,704,384	+				+1.6
1,704,416	+				-0.4
1,704,425	-				-0.4
1,704,460	+				-1.6
1,704,462	+				-2.0
1,704,462	+				+0.3
1,704,463	+				-1.9
1,704,475	-				-1.8
1,704,550	+				-0.3
1,704,553	+				+1.0
1,704,560	+				-0.9
1,704,561	+				-0.9
1,704,564	+				+0.4
1,704,568	-				-1.1
1,704,569	-				+0.0
1,704,569	-				+2.6
1,704,569	-				+1.6
1,704,626	+				+2.6
1,704,626	+				+0.6
1,704,668	+		CCNA_01586	0.11	-1.5
1,704,673	+		CCNA_01586	0.12	+0.0
1,704,683	+		CCNA_01586	0.13	-1.0
1,704,683	+		CCNA_01586	0.13	+0.0
1,704,683	+		CCNA_01586	0.13	-0.4
1,704,683	+		CCNA_01586	0.13	+0.3
1,704,740	+		CCNA_01586	0.21	+0.3
1,704,753	-		CCNA_01586	0.23	-0.7
1,704,835	-		CCNA_01586	0.34	-0.2
1,704,835	-		CCNA_01586	0.34	+0.0
1,704,929	+		CCNA_01586	0.47	+0.9
1,704,941	-		CCNA_01586	0.49	+1.0
1,704,977	-		CCNA_01586	0.54	-0.2
1,704,984	+		CCNA_01586	0.55	+0.3
1,705,001	+		CCNA_01586	0.57	+2.6
1,705,035	+		CCNA_01586	0.62	-0.6
1,705,043	-		CCNA_01586	0.63	+0.3
1,705,043	-		CCNA_01586	0.63	+0.0
1,705,068	+		CCNA_01586	0.67	+0.9
1,705,074	+		CCNA_01586	0.67	-0.7
1,705,074	+		CCNA_01586	0.67	-0.6
1,705,118	+		CCNA_01586	0.73	+1.6
1,705,212	-		CCNA_01586	0.86	+0.1
1,705,249	+				-0.2
1,705,249	+				+0.6
1,705,265	-				+3.6
1,705,275	+				-1.8
1,705,342	+				-2.5
1,705,376	+				+2.6
1,705,377	+				+2.2
1,705,393	-				+1.0
1,705,394	+				+0.1
1,705,453	+		CCNA_01587	0.10	-0.2
1,705,460	+		CCNA_01587	0.11	+1.3
1,705,486	-		CCNA_01587	0.12	-1.1
1,705,497	+		CCNA_01587	0.13	+1.6
1,705,516	-		CCNA_01587	0.14	-1.8
1,705,526	-		CCNA_01587	0.15	-0.8
1,705,625	+		CCNA_01587	0.22	+0.3
1,705,625	+		CCNA_01587	0.22	-0.2
1,705,625	+		CCNA_01587	0.22	+0.6
1,705,625	+		CCNA_01587	0.22	+1.0
1,705,628	-		CCNA_01587	0.22	-1.3
1,705,628	-		CCNA_01587	0.22	+1.6
1,705,650	-		CCNA_01587	0.24	-0.4
1,705,663	-		CCNA_01587	0.25	-0.4
1,705,663	-		CCNA_01587	0.25	-0.7
1,705,685	-		CCNA_01587	0.26	+1.6
1,705,687	+		CCNA_01587	0.26	-0.6
1,705,687	+		CCNA_01587	0.26	-1.3
1,705,687	+		CCNA_01587	0.26	-0.9
1,705,695	-		CCNA_01587	0.27	-0.4
1,705,708	+		CCNA_01587	0.28	-0.6
1,705,817	+		CCNA_01587	0.35	+0.3
1,705,820	+		CCNA_01587	0.35	-0.7
1,705,825	-		CCNA_01587	0.36	-1.2
1,705,830	-		CCNA_01587	0.36	+1.0
1,705,842	+		CCNA_01587	0.37	-1.0
1,705,864	-		CCNA_01587	0.38	+1.6
1,705,884	+		CCNA_01587	0.40	-0.4
1,705,956	-		CCNA_01587	0.45	+1.6
1,705,956	-		CCNA_01587	0.45	-0.9
1,705,978	-		CCNA_01587	0.46	-1.9
1,705,979	+		CCNA_01587	0.46	+0.3
1,706,029	+		CCNA_01587	0.50	-0.6
1,706,122	+		CCNA_01587	0.56	+0.3
1,706,153	-		CCNA_01587	0.58	+0.6
1,706,240	-		CCNA_01587	0.64	+1.9
1,706,273	-		CCNA_01587	0.67	-0.6
1,706,301	+		CCNA_01587	0.69	+0.3
1,706,302	-		CCNA_01587	0.69	+0.0
1,706,319	-		CCNA_01587	0.70	+0.6
1,706,335	-		CCNA_01587	0.71	+0.6
1,706,335	-		CCNA_01587	0.71	-0.2
1,706,335	-		CCNA_01587	0.71	+0.6
1,706,364	-		CCNA_01587	0.73	+0.0
1,706,373	+		CCNA_01587	0.74	-1.3
1,706,391	-		CCNA_01587	0.75	+0.6
1,706,422	-		CCNA_01587	0.77	+2.6
1,706,430	+		CCNA_01587	0.78	-1.1
1,706,433	-		CCNA_01587	0.78	-0.4
1,706,457	+		CCNA_01587	0.79	+0.0
1,706,467	+		CCNA_01587	0.80	+1.6
1,706,467	+		CCNA_01587	0.80	-0.3
1,706,475	-		CCNA_01587	0.81	+0.6
1,706,487	+		CCNA_01587	0.81	-0.9
1,706,497	+		CCNA_01587	0.82	-0.9
1,706,505	+				+1.6
1,706,523	-		CCNA_01587	0.84	+0.0
1,706,554	-		CCNA_01587	0.86	-1.4
1,706,559	-		CCNA_01587	0.86	-0.2
1,706,609	+		CCNA_01587	0.90	+0.4
1,706,617	-				+0.6
1,706,727	+				-1.4
1,706,732	+				-1.1
1,706,773	+				-0.7
1,706,903	-		CCNA_01588	0.11	-1.9
1,706,958	-		CCNA_01588	0.15	-0.7
1,706,981	-		CCNA_01588	0.17	+0.3
1,706,983	-		CCNA_01588	0.17	-1.4
1,707,010	+		CCNA_01588	0.19	-0.6
1,707,018	-		CCNA_01588	0.20	+0.0
1,707,043	+		CCNA_01588	0.21	-1.7
1,707,043	+		CCNA_01588	0.21	-2.2
1,707,071	-		CCNA_01588	0.24	-0.3
1,707,090	+		CCNA_01588	0.25	-0.8
1,707,093	-		CCNA_01588	0.25	-0.4
1,707,105	+		CCNA_01588	0.26	-1.9
1,707,114	+		CCNA_01588	0.27	-1.7
1,707,159	+		CCNA_01588	0.30	+1.0
1,707,167	-		CCNA_01588	0.31	+0.6
1,707,167	-		CCNA_01588	0.31	+0.5
1,707,200	-		CCNA_01588	0.33	+0.6
1,707,204	+		CCNA_01588	0.33	-0.2
1,707,291	-		CCNA_01588	0.40	+1.2
1,707,291	-		CCNA_01588	0.40	+0.0
1,707,312	-		CCNA_01588	0.41	+0.4
1,707,372	+		CCNA_01588	0.46	+2.6
1,707,428	+		CCNA_01588	0.50	-0.2
1,707,433	+		CCNA_01588	0.50	-0.4
1,707,433	+		CCNA_01588	0.50	-0.4
1,707,441	-		CCNA_01588	0.51	-0.2
1,707,462	+		CCNA_01588	0.52	+1.0
1,707,468	+		CCNA_01588	0.53	+2.0
1,707,468	+		CCNA_01588	0.53	+1.7
1,707,469	+		CCNA_01588	0.53	-0.9
1,707,469	+		CCNA_01588	0.53	-0.2
1,707,505	-		CCNA_01588	0.56	+0.8
1,707,505	-		CCNA_01588	0.56	-1.7
1,707,569	+		CCNA_01588	0.60	+0.3
1,707,571	-		CCNA_01588	0.60	-1.2
1,707,590	+		CCNA_01588	0.62	-0.2
1,707,635	-		CCNA_01588	0.65	+1.3
1,707,660	-		CCNA_01588	0.67	+1.0
1,707,663	+		CCNA_01588	0.67	-0.2
1,707,663	+		CCNA_01588	0.67	+0.0
1,707,671	-		CCNA_01588	0.68	-1.0
1,707,671	-		CCNA_01588	0.68	+0.0
1,707,671	-		CCNA_01588	0.68	-0.2
1,707,724	-				+1.6