Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01511

Experiment: PYE with Benzalkonium Chloride 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Benzalkonium Chloride 0.0001 mg/ml
1,619,978	-		CCNA_01509	0.79	+0.7
1,620,062	+		CCNA_01509	0.86	-1.1
1,620,070	-		CCNA_01509	0.87	-0.0
1,620,075	-		CCNA_01509	0.87	+0.7
1,620,108	+				-0.8
1,620,108	+				-0.7
1,620,116	-				+0.4
1,620,116	-				-0.5
1,620,138	+				+1.8
1,620,164	+				-0.4
1,620,174	+				-1.0
1,620,177	+				+0.2
1,620,177	+				+0.5
1,620,177	+				+1.5
1,620,179	+				+2.5
1,620,187	-				+1.4
1,620,187	-				+0.7
1,620,243	-				+0.4
1,620,247	+				-0.7
1,620,295	-				+0.1
1,620,302	+				-1.0
1,620,330	-				-0.3
1,620,462	-				-0.9
1,620,477	-				-0.5
1,620,480	+				-0.6
1,620,480	+				-2.4
1,620,480	+				-0.5
1,620,488	-				-0.0
1,620,488	-				-1.5
1,620,488	-				-1.0
1,620,488	-				-1.8
1,620,493	-				+2.5
1,620,504	+				+2.4
1,620,514	+				-0.5
1,620,582	+		CCNA_01510	0.26	+0.2
1,620,590	-		CCNA_01510	0.28	+0.5
1,620,590	-		CCNA_01510	0.28	+2.5
1,620,591	-		CCNA_01510	0.28	+0.2
1,620,686	+		CCNA_01510	0.53	+1.0
1,620,736	+		CCNA_01510	0.66	-0.0
1,620,741	+		CCNA_01510	0.67	+1.5
1,620,754	-		CCNA_01510	0.71	-0.5
1,620,794	-		CCNA_01510	0.81	-0.0
1,620,821	-		CCNA_01510	0.88	+0.5
1,620,821	-		CCNA_01510	0.88	+0.4
1,620,821	-		CCNA_01510	0.88	+0.4
1,620,919	+				-0.6
1,620,958	+		CCNA_01511	0.10	-0.5
1,620,958	+		CCNA_01511	0.10	-0.3
1,620,958	+		CCNA_01511	0.10	+0.5
1,620,964	+		CCNA_01511	0.11	+0.5
1,620,966	-		CCNA_01511	0.11	-0.0
1,620,966	-		CCNA_01511	0.11	+1.0
1,620,966	-		CCNA_01511	0.11	-1.3
1,621,002	+		CCNA_01511	0.15	-0.5
1,621,002	+		CCNA_01511	0.15	+0.4
1,621,002	+		CCNA_01511	0.15	-0.3
1,621,002	+		CCNA_01511	0.15	-0.9
1,621,005	-		CCNA_01511	0.15	+1.0
1,621,007	+		CCNA_01511	0.16	+1.5
1,621,007	+		CCNA_01511	0.16	-0.3
1,621,007	+		CCNA_01511	0.16	+0.2
1,621,007	+		CCNA_01511	0.16	-1.3
1,621,010	-		CCNA_01511	0.16	-0.2
1,621,013	+		CCNA_01511	0.16	-0.5
1,621,015	-		CCNA_01511	0.17	+1.0
1,621,015	-		CCNA_01511	0.17	-1.6
1,621,015	-		CCNA_01511	0.17	+2.5
1,621,044	+		CCNA_01511	0.20	-0.6
1,621,051	-		CCNA_01511	0.20	-0.3
1,621,063	+		CCNA_01511	0.22	+0.5
1,621,085	-		CCNA_01511	0.24	-1.8
1,621,109	+		CCNA_01511	0.27	-1.0
1,621,109	+		CCNA_01511	0.27	-0.9
1,621,135	-		CCNA_01511	0.30	-0.0
1,621,137	-		CCNA_01511	0.30	-1.4
1,621,142	+		CCNA_01511	0.31	-1.5
1,621,217	+		CCNA_01511	0.39	-1.9
1,621,218	+		CCNA_01511	0.39	+2.5
1,621,227	+		CCNA_01511	0.40	-0.0
1,621,249	+		CCNA_01511	0.42	+2.5
1,621,249	+		CCNA_01511	0.42	-1.2
1,621,257	-		CCNA_01511	0.43	-0.9
1,621,257	-		CCNA_01511	0.43	+0.2
1,621,274	+		CCNA_01511	0.45	+2.5
1,621,274	+		CCNA_01511	0.45	+2.5
1,621,274	+		CCNA_01511	0.45	-0.6
1,621,354	-		CCNA_01511	0.54	-2.5
1,621,378	+		CCNA_01511	0.57	+0.2
1,621,387	+		CCNA_01511	0.58	-0.9
1,621,407	+		CCNA_01511	0.60	+1.0
1,621,415	-		CCNA_01511	0.61	-1.5
1,621,415	-		CCNA_01511	0.61	-0.4
1,621,418	+		CCNA_01511	0.61	-0.3
1,621,420	+		CCNA_01511	0.61	-0.5
1,621,420	+		CCNA_01511	0.61	-0.6
1,621,426	-		CCNA_01511	0.62	-1.0
1,621,426	-		CCNA_01511	0.62	-0.3
1,621,428	-		CCNA_01511	0.62	+0.5
1,621,470	+		CCNA_01511	0.67	-0.9
1,621,524	+		CCNA_01511	0.73	+0.2
1,621,568	+		CCNA_01511	0.78	+0.2
1,621,568	+		CCNA_01511	0.78	-0.0
1,621,592	-		CCNA_01511	0.80	-1.8
1,621,592	-		CCNA_01511	0.80	+1.1
1,621,593	-		CCNA_01511	0.81	-0.0
1,621,635	-		CCNA_01511	0.85	-0.8
1,621,706	-				-0.9
1,621,715	-				-0.8
1,621,737	-				-0.5
1,621,751	+				+1.5
1,621,753	+				-0.3
1,621,759	-				+1.0
1,621,761	-				+2.0
1,621,761	-				+2.5
1,621,761	-				+1.5
1,621,761	-				-1.4
1,621,763	+				+0.5
1,621,814	+				+0.5
1,621,822	-				-2.0
1,621,846	-				+1.5
1,621,871	-				+1.0
1,621,878	+				-0.5
1,621,891	-				-2.0
1,621,932	+				-0.8
1,621,940	+				+1.3
1,621,940	+				-1.4
1,621,940	-				-1.4
1,621,950	-				+0.4
1,621,963	-				-1.3
1,622,005	+		CCNA_01512	0.16	+0.5
1,622,005	+		CCNA_01512	0.16	-0.0
1,622,005	+		CCNA_01512	0.16	-1.6
1,622,005	+		CCNA_01512	0.16	-1.3
1,622,005	+		CCNA_01512	0.16	-1.3
1,622,019	+		CCNA_01512	0.18	-0.0
1,622,049	+		CCNA_01512	0.23	+0.3
1,622,125	+		CCNA_01512	0.34	+1.0
1,622,130	+		CCNA_01512	0.35	+1.0
1,622,138	-		CCNA_01512	0.36	+1.5
1,622,149	+		CCNA_01512	0.38	-0.0
1,622,157	-		CCNA_01512	0.39	-0.0
1,622,197	-		CCNA_01512	0.45	-0.9
1,622,217	-		CCNA_01512	0.48	-1.0
1,622,222	-		CCNA_01512	0.48	+0.7
1,622,222	-		CCNA_01512	0.48	-2.0
1,622,240	-		CCNA_01512	0.51	+0.2
1,622,252	-		CCNA_01512	0.53	+1.8
1,622,259	+		CCNA_01512	0.54	-0.6
1,622,261	+		CCNA_01512	0.54	+1.5
1,622,267	-		CCNA_01512	0.55	+0.5
1,622,269	-		CCNA_01512	0.56	+0.2
1,622,269	-		CCNA_01512	0.56	-0.6
1,622,269	-		CCNA_01512	0.56	+0.5
1,622,269	-		CCNA_01512	0.56	+2.2
1,622,293	+		CCNA_01512	0.59	+0.2
1,622,293	+		CCNA_01512	0.59	-0.5
1,622,293	+		CCNA_01512	0.59	-0.0
1,622,329	+		CCNA_01512	0.65	+1.5
1,622,329	+		CCNA_01512	0.65	-0.3
1,622,329	+		CCNA_01512	0.65	-1.5
1,622,357	+		CCNA_01512	0.69	-1.0
1,622,362	+		CCNA_01512	0.70	+0.1
1,622,376	-		CCNA_01512	0.72	+0.7
1,622,386	+		CCNA_01512	0.73	+1.5
1,622,386	+		CCNA_01512	0.73	+0.8
1,622,386	+		CCNA_01512	0.73	-0.0
1,622,386	+		CCNA_01512	0.73	+1.0
1,622,394	-		CCNA_01512	0.74	-0.5
1,622,439	-		CCNA_01512	0.81	-0.0
1,622,439	-		CCNA_01512	0.81	-0.5
1,622,484	-		CCNA_01512	0.88	+0.3
1,622,507	-				-0.9
1,622,517	-				-1.1
1,622,539	-				-0.4
1,622,551	-				+0.5
1,622,553	+				-0.9
1,622,662	-				+1.2
1,622,664	-				+2.5
1,622,664	-				-0.0
1,622,720	-				+0.2