Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01472

Experiment: PYE with Benzalkonium Chloride 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Benzalkonium Chloride 0.0001 mg/ml
1,578,635	+		CCNA_01471	0.33	+0.9
1,578,643	-		CCNA_01471	0.33	+0.9
1,578,643	-		CCNA_01471	0.33	+0.9
1,578,643	-		CCNA_01471	0.33	-1.4
1,578,674	+		CCNA_01471	0.35	-1.1
1,578,748	+		CCNA_01471	0.40	+1.5
1,578,748	+		CCNA_01471	0.40	-0.1
1,578,751	-		CCNA_01471	0.41	+0.2
1,578,767	+		CCNA_01471	0.42	-1.3
1,578,805	+		CCNA_01471	0.44	-0.5
1,578,813	-		CCNA_01471	0.45	-0.3
1,578,818	+		CCNA_01471	0.45	-0.5
1,578,819	+		CCNA_01471	0.45	+0.7
1,578,850	+		CCNA_01471	0.47	-0.3
1,578,850	+		CCNA_01471	0.47	-2.4
1,578,850	+		CCNA_01471	0.47	+1.9
1,578,850	+		CCNA_01471	0.47	-0.3
1,578,858	-		CCNA_01471	0.48	-1.9
1,578,858	-		CCNA_01471	0.48	-1.2
1,578,858	-		CCNA_01471	0.48	+1.2
1,578,862	+		CCNA_01471	0.48	+2.5
1,578,865	-		CCNA_01471	0.48	+1.5
1,578,883	-		CCNA_01471	0.49	+0.9
1,578,898	+		CCNA_01471	0.50	+2.5
1,578,964	-		CCNA_01471	0.55	-0.7
1,578,965	+		CCNA_01471	0.55	+0.7
1,578,973	-		CCNA_01471	0.55	+0.9
1,579,018	+		CCNA_01471	0.58	+0.2
1,579,023	+		CCNA_01471	0.59	+1.5
1,579,031	-		CCNA_01471	0.59	-0.7
1,579,031	-		CCNA_01471	0.59	-0.3
1,579,055	+		CCNA_01471	0.61	+0.1
1,579,093	-		CCNA_01471	0.64	+1.5
1,579,139	+		CCNA_01471	0.67	-1.6
1,579,147	-		CCNA_01471	0.67	-0.7
1,579,192	+		CCNA_01471	0.70	-1.5
1,579,192	+		CCNA_01471	0.70	-2.4
1,579,192	+		CCNA_01471	0.70	+0.2
1,579,192	+		CCNA_01471	0.70	-2.1
1,579,192	+		CCNA_01471	0.70	+0.2
1,579,200	-		CCNA_01471	0.71	+1.5
1,579,200	-		CCNA_01471	0.71	-1.8
1,579,200	-		CCNA_01471	0.71	-1.3
1,579,200	-		CCNA_01471	0.71	+0.5
1,579,227	-		CCNA_01471	0.73	-0.7
1,579,235	-		CCNA_01471	0.73	+2.5
1,579,246	-		CCNA_01471	0.74	+1.5
1,579,291	+		CCNA_01471	0.77	-1.8
1,579,299	-		CCNA_01471	0.77	-0.6
1,579,355	+		CCNA_01471	0.81	+0.5
1,579,362	+		CCNA_01471	0.82	-0.4
1,579,370	-		CCNA_01471	0.82	-0.8
1,579,396	+		CCNA_01471	0.84	+2.8
1,579,398	+		CCNA_01471	0.84	-1.7
1,579,433	+		CCNA_01471	0.86	-0.7
1,579,439	+		CCNA_01471	0.87	-0.1
1,579,451	-		CCNA_01471	0.88	+0.1
1,579,466	-		CCNA_01471	0.89	-2.1
1,579,487	+		CCNA_01471	0.90	+0.7
1,579,502	+				-0.5
1,579,502	+				-0.1
1,579,510	-				+1.5
1,579,530	+				-0.1
1,579,556	+				+0.2
1,579,592	-				-0.3
1,579,594	+				+0.1
1,579,594	+				+0.9
1,579,594	+				-0.8
1,579,594	+				-0.9
1,579,594	+				-1.7
1,579,594	+				-0.1
1,579,594	+				-2.8
1,579,602	-				+1.5
1,579,602	-				-1.9
1,579,668	-				-1.3
1,579,678	+				-0.9
1,579,678	+				+0.2
1,579,686	-		CCNA_01472	0.11	-1.1
1,579,699	+		CCNA_01472	0.13	-0.9
1,579,707	-		CCNA_01472	0.15	-0.5
1,579,759	+		CCNA_01472	0.25	-1.7
1,579,800	+		CCNA_01472	0.33	-0.1
1,579,801	-		CCNA_01472	0.34	-1.8
1,579,813	+		CCNA_01472	0.36	-0.9
1,579,831	+		CCNA_01472	0.40	+0.4
1,579,848	+		CCNA_01472	0.43	+0.7
1,579,884	-		CCNA_01472	0.50	-1.6
1,579,903	+		CCNA_01472	0.54	+0.9
1,579,936	+		CCNA_01472	0.60	-0.9
1,580,006	+		CCNA_01472	0.74	-1.2
1,580,019	-				+1.5
1,580,039	-		CCNA_01472	0.81	-1.6
1,580,045	-		CCNA_01472	0.82	-0.1
1,580,068	-		CCNA_01472	0.87	+1.5
1,580,132	+				-0.3
1,580,140	+				-0.0
1,580,148	-				+1.5
1,580,208	-				+0.5
1,580,247	-				+0.2
1,580,287	-				+0.9
1,580,339	+				+1.5
1,580,429	+		CCNA_01473	0.14	+0.9
1,580,429	+		CCNA_01473	0.14	-1.1
1,580,437	-		CCNA_01473	0.14	-0.5
1,580,437	-		CCNA_01473	0.14	-0.9
1,580,453	-		CCNA_01473	0.15	+1.5
1,580,490	+		CCNA_01473	0.17	-0.8
1,580,518	-		CCNA_01473	0.18	+0.5
1,580,545	+		CCNA_01473	0.19	-1.5
1,580,564	-		CCNA_01473	0.20	-0.5
1,580,601	+		CCNA_01473	0.22	+0.8
1,580,639	-		CCNA_01473	0.23	-0.3
1,580,723	-		CCNA_01473	0.27	-0.7
1,580,766	+		CCNA_01473	0.29	-1.3
1,580,788	+		CCNA_01473	0.30	-1.4
1,580,794	+		CCNA_01473	0.31	+0.3
1,580,930	+		CCNA_01473	0.37	-1.5
1,580,986	+		CCNA_01473	0.39	-1.4
1,581,003	+		CCNA_01473	0.40	+0.3
1,581,061	-		CCNA_01473	0.43	+0.5
1,581,071	+		CCNA_01473	0.43	+0.9
1,581,119	+		CCNA_01473	0.45	-0.8
1,581,124	-		CCNA_01473	0.46	-0.5
1,581,127	-		CCNA_01473	0.46	-0.3