Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01415

Experiment: PYE with Benzalkonium Chloride 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Benzalkonium Chloride 0.0001 mg/ml
1,531,849	-		CCNA_01414	0.11	+0.2
1,531,856	+		CCNA_01414	0.11	-0.8
1,531,856	+		CCNA_01414	0.11	+0.2
1,531,856	+		CCNA_01414	0.11	+1.7
1,531,864	-		CCNA_01414	0.12	-1.9
1,531,866	-		CCNA_01414	0.12	-0.1
1,531,887	+		CCNA_01414	0.14	-0.3
1,531,892	+		CCNA_01414	0.15	+0.1
1,531,892	+		CCNA_01414	0.15	+1.0
1,531,911	-		CCNA_01414	0.17	+0.1
1,531,949	+				+0.5
1,531,974	+		CCNA_01414	0.23	+0.6
1,532,038	-		CCNA_01414	0.29	-0.1
1,532,064	+		CCNA_01414	0.31	-0.3
1,532,066	+		CCNA_01414	0.31	+0.2
1,532,102	+		CCNA_01414	0.35	+0.5
1,532,153	+		CCNA_01414	0.40	+0.3
1,532,154	+		CCNA_01414	0.40	+1.2
1,532,164	+		CCNA_01414	0.41	+1.4
1,532,173	+		CCNA_01414	0.42	+1.2
1,532,183	+		CCNA_01414	0.42	+1.2
1,532,211	+		CCNA_01414	0.45	+1.1
1,532,245	+		CCNA_01414	0.48	+0.7
1,532,245	+		CCNA_01414	0.48	+1.0
1,532,245	+		CCNA_01414	0.48	+0.2
1,532,245	+		CCNA_01414	0.48	+1.7
1,532,245	+		CCNA_01414	0.48	+0.9
1,532,245	+		CCNA_01414	0.48	+0.3
1,532,253	-		CCNA_01414	0.49	+1.5
1,532,253	-		CCNA_01414	0.49	-0.1
1,532,253	-		CCNA_01414	0.49	-0.3
1,532,267	+		CCNA_01414	0.50	+1.4
1,532,267	+		CCNA_01414	0.50	+0.1
1,532,313	+		CCNA_01414	0.55	+1.2
1,532,379	+		CCNA_01414	0.61	+2.1
1,532,384	+		CCNA_01414	0.62	+1.9
1,532,396	+		CCNA_01414	0.63	+0.9
1,532,414	+		CCNA_01414	0.64	+2.2
1,532,496	-		CCNA_01414	0.72	+0.9
1,532,507	+		CCNA_01414	0.73	+1.5
1,532,508	-		CCNA_01414	0.73	+0.9
1,532,533	-		CCNA_01414	0.76	-1.7
1,532,540	-		CCNA_01414	0.76	+0.5
1,532,540	-		CCNA_01414	0.76	-1.1
1,532,554	+		CCNA_01414	0.78	+0.1
1,532,677	+		CCNA_01414	0.89	+0.8
1,532,685	-				-0.3
1,532,687	+				+0.5
1,532,689	+				+1.7
1,532,707	+				+1.5
1,532,707	+				+1.6
1,532,707	+				+0.6
1,532,715	-				-0.1
1,532,751	+				+3.8
1,532,799	+				+1.1
1,532,816	+				+1.8
1,532,857	-				+0.2
1,532,859	+				+1.5
1,532,877	+				+1.4
1,532,877	+				+1.9
1,533,035	+		CCNA_01415	0.24	+1.6
1,533,035	+		CCNA_01415	0.24	+1.6
1,533,045	+		CCNA_01415	0.25	+2.7
1,533,053	-		CCNA_01415	0.26	+0.2
1,533,053	-		CCNA_01415	0.26	+2.5
1,533,053	-		CCNA_01415	0.26	+0.9
1,533,060	+		CCNA_01415	0.27	+1.6
1,533,073	+		CCNA_01415	0.28	+0.9
1,533,100	-		CCNA_01415	0.32	+1.5
1,533,146	+		CCNA_01415	0.37	+1.2
1,533,147	+		CCNA_01415	0.38	+1.1
1,533,152	+		CCNA_01415	0.38	+1.2
1,533,152	+		CCNA_01415	0.38	+1.7
1,533,152	+		CCNA_01415	0.38	+1.9
1,533,152	+		CCNA_01415	0.38	+1.5
1,533,153	+		CCNA_01415	0.38	+0.0
1,533,153	+		CCNA_01415	0.38	+0.9
1,533,153	+		CCNA_01415	0.38	+1.3
1,533,153	+		CCNA_01415	0.38	+1.4
1,533,153	+		CCNA_01415	0.38	+1.6
1,533,153	+		CCNA_01415	0.38	-0.3
1,533,153	+		CCNA_01415	0.38	+1.4
1,533,153	+		CCNA_01415	0.38	-0.4
1,533,153	+		CCNA_01415	0.38	+1.2
1,533,153	+		CCNA_01415	0.38	+2.3
1,533,153	+		CCNA_01415	0.38	+0.3
1,533,153	+		CCNA_01415	0.38	+1.3
1,533,160	-		CCNA_01415	0.39	-1.1
1,533,160	-		CCNA_01415	0.39	+0.5
1,533,161	-		CCNA_01415	0.39	+0.2
1,533,161	-		CCNA_01415	0.39	+1.5
1,533,161	-		CCNA_01415	0.39	+1.2
1,533,187	-		CCNA_01415	0.43	+0.2
1,533,187	-		CCNA_01415	0.43	-0.9
1,533,199	+		CCNA_01415	0.44	+0.5
1,533,290	+		CCNA_01415	0.56	+0.6
1,533,309	+		CCNA_01415	0.58	+1.5
1,533,364	-		CCNA_01415	0.65	+0.5
1,533,439	+		CCNA_01415	0.74	+0.6
1,533,447	+		CCNA_01415	0.75	+2.1
1,533,457	+		CCNA_01415	0.76	+0.9
1,533,457	-		CCNA_01415	0.76	+0.9
1,533,467	+		CCNA_01415	0.78	+2.0
1,533,478	+		CCNA_01415	0.79	+0.5
1,533,486	-		CCNA_01415	0.80	+2.9
1,533,486	-		CCNA_01415	0.80	+2.5
1,533,488	+		CCNA_01415	0.80	+1.8
1,533,488	+		CCNA_01415	0.80	+2.0
1,533,488	+		CCNA_01415	0.80	+2.1
1,533,493	+		CCNA_01415	0.81	+1.5
1,533,496	-		CCNA_01415	0.81	-0.7
1,533,496	-		CCNA_01415	0.81	-0.1
1,533,501	-		CCNA_01415	0.82	+1.5
1,533,502	-		CCNA_01415	0.82	+0.9
1,533,528	+		CCNA_01415	0.85	+1.9
1,533,528	+		CCNA_01415	0.85	+2.7
1,533,575	+				+1.4
1,533,575	+				+1.7
1,533,731	-				+0.5
1,533,794	-				+0.9
1,533,796	-				-0.5
1,533,819	+		CCNA_01416	0.11	+0.9
1,533,918	-		CCNA_01416	0.23	-0.1
1,533,942	-		CCNA_01416	0.25	+2.5
1,533,952	-		CCNA_01416	0.26	-1.2
1,534,001	+		CCNA_01416	0.32	-1.5
1,534,001	+		CCNA_01416	0.32	+0.9
1,534,009	-		CCNA_01416	0.33	-0.7
1,534,094	-		CCNA_01416	0.42	+0.5
1,534,103	+		CCNA_01416	0.43	+0.5
1,534,103	+		CCNA_01416	0.43	+0.9
1,534,104	+		CCNA_01416	0.43	+1.2
1,534,104	-		CCNA_01416	0.43	+0.5
1,534,111	-		CCNA_01416	0.44	+0.9
1,534,112	-		CCNA_01416	0.44	+0.4
1,534,211	-		CCNA_01416	0.55	+1.5
1,534,240	+		CCNA_01416	0.58	-0.2
1,534,271	+		CCNA_01416	0.62	+0.5
1,534,272	+		CCNA_01416	0.62	+0.2
1,534,335	+		CCNA_01416	0.69	-0.0
1,534,340	+		CCNA_01416	0.70	+0.4
1,534,340	+		CCNA_01416	0.70	+0.4
1,534,340	+		CCNA_01416	0.70	+0.6
1,534,340	+		CCNA_01416	0.70	+2.8
1,534,345	+		CCNA_01416	0.70	+1.1
1,534,345	+		CCNA_01416	0.70	+0.7
1,534,348	-		CCNA_01416	0.70	-1.4
1,534,348	-		CCNA_01416	0.70	-0.7
1,534,348	-		CCNA_01416	0.70	-1.1
1,534,348	-		CCNA_01416	0.70	+0.6
1,534,348	-		CCNA_01416	0.70	+1.5
1,534,353	-		CCNA_01416	0.71	-1.0
1,534,366	-		CCNA_01416	0.72	+0.9
1,534,371	-		CCNA_01416	0.73	+0.3
1,534,371	-		CCNA_01416	0.73	-1.9
1,534,371	-				+1.5
1,534,457	-		CCNA_01416	0.83	+0.9
1,534,510	+		CCNA_01416	0.89	-0.8
1,534,539	-				-0.8
1,534,539	-				+2.5
1,534,563	+				+0.3
1,534,587	+				-1.2
1,534,593	-				-1.7