Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01373

Experiment: PYE with Benzalkonium Chloride 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Benzalkonium Chloride 0.0001 mg/ml
1,486,576	+		CCNA_01371	0.50	+0.2
1,486,577	-		CCNA_01371	0.50	+1.8
1,486,582	-		CCNA_01371	0.52	+1.9
1,486,589	+		CCNA_01371	0.54	+0.6
1,486,589	+		CCNA_01371	0.54	+1.6
1,486,597	-		CCNA_01371	0.57	+0.1
1,486,643	-		CCNA_01371	0.72	+1.2
1,486,705	-				+1.1
1,486,729	+				-0.4
1,486,859	-				-0.1
1,486,896	-		CCNA_01372	0.11	-1.1
1,486,896	-		CCNA_01372	0.11	-1.2
1,486,928	-		CCNA_01372	0.16	-0.1
1,486,957	+		CCNA_01372	0.21	-1.5
1,486,984	+		CCNA_01372	0.25	+1.0
1,486,992	-		CCNA_01372	0.26	+0.6
1,487,120	-		CCNA_01372	0.47	+0.1
1,487,163	-		CCNA_01372	0.55	+0.8
1,487,180	+		CCNA_01372	0.57	+0.8
1,487,229	-		CCNA_01372	0.65	-0.7
1,487,276	+		CCNA_01372	0.73	-0.0
1,487,288	-		CCNA_01372	0.75	+4.2
1,487,303	+		CCNA_01372	0.78	+2.6
1,487,311	-		CCNA_01372	0.79	-0.3
1,487,321	-		CCNA_01372	0.80	-1.8
1,487,322	-		CCNA_01372	0.81	+1.2
1,487,322	-		CCNA_01372	0.81	+0.2
1,487,322	-		CCNA_01372	0.81	-0.0
1,487,324	+		CCNA_01372	0.81	-0.2
1,487,327	-		CCNA_01372	0.81	-0.5
1,487,373	+		CCNA_01372	0.89	-0.0
1,487,382	+				+1.6
1,487,411	+				-0.6
1,487,419	-				+1.0
1,487,419	-				+0.2
1,487,428	-				+0.6
1,487,429	-				-0.8
1,487,430	+				+2.1
1,487,438	-				+0.2
1,487,451	+				+1.6
1,487,451	+				-1.0
1,487,457	-				+1.6
1,487,458	+				-0.6
1,487,458	+				-0.6
1,487,466	-				+3.0
1,487,466	-				+0.6
1,487,542	-				-1.0
1,487,574	+				-1.1
1,487,597	+		CCNA_01373	0.11	-0.2
1,487,640	+		CCNA_01373	0.16	+0.6
1,487,700	-		CCNA_01373	0.23	+0.6
1,487,734	+		CCNA_01373	0.28	-0.9
1,487,736	-		CCNA_01373	0.28	-1.5
1,487,759	-		CCNA_01373	0.31	+1.0
1,487,761	+		CCNA_01373	0.31	-2.5
1,487,766	+		CCNA_01373	0.31	-0.4
1,487,766	+		CCNA_01373	0.31	-1.1
1,487,766	+		CCNA_01373	0.31	-1.8
1,487,774	-		CCNA_01373	0.32	+1.0
1,487,774	-		CCNA_01373	0.32	-1.8
1,487,774	-		CCNA_01373	0.32	+1.0
1,487,785	+		CCNA_01373	0.34	+0.2
1,487,803	+		CCNA_01373	0.36	+0.6
1,487,811	-		CCNA_01373	0.37	-0.0
1,487,814	+		CCNA_01373	0.37	-1.0
1,487,876	-		CCNA_01373	0.45	-0.8
1,487,882	-		CCNA_01373	0.46	-1.3
1,487,887	-		CCNA_01373	0.46	+1.0
1,487,921	-		CCNA_01373	0.51	+1.6
1,487,962	+		CCNA_01373	0.56	+1.6
1,487,985	+		CCNA_01373	0.59	-1.2
1,488,006	+		CCNA_01373	0.61	+1.2
1,488,009	+		CCNA_01373	0.62	+1.6
1,488,013	+		CCNA_01373	0.62	-0.8
1,488,014	-		CCNA_01373	0.62	-2.5
1,488,099	-		CCNA_01373	0.73	-0.6
1,488,162	+		CCNA_01373	0.81	-0.4
1,488,171	-		CCNA_01373	0.82	+1.0
1,488,202	+		CCNA_01373	0.86	-0.4
1,488,210	-		CCNA_01373	0.86	-1.4
1,488,219	+		CCNA_01373	0.88	-1.4
1,488,268	-				-0.0
1,488,274	-				-0.4
1,488,311	+				-0.6
1,488,371	+				-1.4
1,488,424	+				-0.6
1,488,424	+				+0.5
1,488,558	+		CCNA_01374	0.16	-1.0
1,488,558	+		CCNA_01374	0.16	-0.0
1,488,558	+		CCNA_01374	0.16	-0.8
1,488,566	-		CCNA_01374	0.17	+1.0
1,488,566	-		CCNA_01374	0.17	+1.2
1,488,620	+		CCNA_01374	0.19	+0.3
1,488,645	+		CCNA_01374	0.21	+1.1
1,488,657	+		CCNA_01374	0.21	-0.5
1,488,687	+		CCNA_01374	0.23	+0.2
1,488,687	+		CCNA_01374	0.23	-0.6
1,488,687	+		CCNA_01374	0.23	-0.9
1,488,687	+		CCNA_01374	0.23	-2.0
1,488,687	+		CCNA_01374	0.23	-1.0
1,488,687	+		CCNA_01374	0.23	-0.9
1,488,687	+		CCNA_01374	0.23	+1.6
1,488,687	+		CCNA_01374	0.23	+1.0
1,488,687	+		CCNA_01374	0.23	-0.4
1,488,687	+		CCNA_01374	0.23	-0.6
1,488,695	-		CCNA_01374	0.23	-0.0
1,488,695	-		CCNA_01374	0.23	-0.3
1,488,695	-		CCNA_01374	0.23	-0.0
1,488,705	+		CCNA_01374	0.24	+1.2
1,488,728	+		CCNA_01374	0.25	+1.0
1,488,828	+		CCNA_01374	0.30	+1.0
1,488,887	+		CCNA_01374	0.33	-1.1
1,488,889	-		CCNA_01374	0.33	-1.1
1,488,889	-		CCNA_01374	0.33	+1.0
1,488,909	+		CCNA_01374	0.34	+0.3
1,488,933	+		CCNA_01374	0.36	-0.0
1,488,941	-		CCNA_01374	0.36	+1.0
1,489,034	-		CCNA_01374	0.41	+2.6
1,489,035	+				+0.2
1,489,043	-		CCNA_01374	0.41	-0.4
1,489,081	-		CCNA_01374	0.43	+1.0
1,489,081	-		CCNA_01374	0.43	+0.6
1,489,111	+		CCNA_01374	0.45	+1.6
1,489,111	+		CCNA_01374	0.45	+1.8
1,489,111	+		CCNA_01374	0.45	+1.7
1,489,111	+		CCNA_01374	0.45	+0.8
1,489,111	+		CCNA_01374	0.45	+1.4
1,489,111	+		CCNA_01374	0.45	+1.5
1,489,111	+		CCNA_01374	0.45	+1.6
1,489,111	+		CCNA_01374	0.45	+2.8
1,489,162	-		CCNA_01374	0.47	-0.0
1,489,173	+		CCNA_01374	0.48	+0.7
1,489,181	-		CCNA_01374	0.48	-0.9
1,489,181	-		CCNA_01374	0.48	+2.6
1,489,182	+		CCNA_01374	0.48	+0.7
1,489,183	+		CCNA_01374	0.48	-1.6
1,489,183	+				+1.6
1,489,183	+		CCNA_01374	0.48	-0.7
1,489,185	-		CCNA_01374	0.49	-0.3
1,489,191	-		CCNA_01374	0.49	+1.6
1,489,191	-		CCNA_01374	0.49	-0.6
1,489,191	-		CCNA_01374	0.49	+0.6
1,489,217	+		CCNA_01374	0.50	+0.8
1,489,219	-		CCNA_01374	0.50	-0.8
1,489,250	-		CCNA_01374	0.52	+1.0
1,489,271	+		CCNA_01374	0.53	+0.7
1,489,293	+		CCNA_01374	0.54	-1.5
1,489,293	+		CCNA_01374	0.54	-0.3
1,489,301	-		CCNA_01374	0.55	+1.6
1,489,301	-		CCNA_01374	0.55	+0.1